Homologs of Psest_3243 from Pseudomonas stutzeri RCH2

TIGR00730 family protein
SEED: Lysine decarboxylase family

139 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas stutzeri RCH2 Psest_3243 TIGR00730 family protein sig. 100 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_132 Lysine decarboxylase family insig. 74 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1389 Lysine decarboxylase family insig. 74 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3589 Lysine decarboxylase family insig. 73 100
o Pseudomonas sp. SVBP6 COO64_RS18015 TIGR00730 family Rossman fold protein insig. 71 100
o Pseudomonas fluorescens FW300-N2C3 AO356_08535 LOG family protein insig. 73 100
o Pseudomonas protegens RBAN4 FABNJH_03055 Cytokinin riboside 5'-monophosphate phosphoribohydrolase insig. 73 100
o Pseudomonas sp. RS175 PFR28_05145 'Putative cytokinin riboside 5'-monophosphate phosphoribohydrolase' transl_table=11 insig. 73 98
o Pseudomonas segetis P6 ACVTMO_RS06140 LOG family protein insig. 75 99
o Pseudomonas fluorescens FW300-N2E3 AO353_13300 LOG family protein cofit 72 100
o Pseudomonas aeruginosa MRSN321 DY961_RS10395 TIGR00730 family Rossman fold protein insig. 73 100
o Pseudomonas aeruginosa PA14 IKLFDK_28935 Cytokinin riboside 5'-monophosphate phosphoribohydrolase insig. 73 100
o Pseudomonas aeruginosa PUPa3 DQ20_RS51660 TIGR00730 family Rossman fold protein insig. 73 100
o Pseudomonas putida KT2440 PP_4871 putative lysine decarboxylase family protein sig. 72 99
o Pseudomonas sp. S08-1 OH686_16655 Lysine decarboxylase family insig. 72 98
o Pseudomonas sp. DMC3 GFF3244 Putative cytokinin riboside 5'-monophosphate phosphoribohydrolase insig. 71 99
o Pseudomonas sp. BP01 JOY50_RS17370 TIGR00730 family Rossman fold protein insig. 71 99
o Serratia liquefaciens MT49 IAI46_14285 TIGR00730 family Rossman fold protein cofit 61 96
o Dechlorosoma suillum PS Dsui_0979 TIGR00730 family protein sig. 60 99
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04542 hypothetical protein insig. 56 96
o Magnetospirillum magneticum AMB-1 AMB_RS14390 TIGR00730 family Rossman fold protein no data 60 95
o Bosea sp. OAE506 ABIE41_RS21595 TIGR00730 family Rossman fold protein insig. 52 96
o Azospirillum brasilense Sp245 AZOBR_RS14105 LOG family protein insig. 58 94
o Paraburkholderia sabiae LMG 24235 QEN71_RS24290 TIGR00730 family Rossman fold protein insig. 53 96
o Burkholderia phytofirmans PsJN BPHYT_RS06500 LOG family protein insig. 54 96
o Paraburkholderia graminis OAS925 ABIE53_001565 uncharacterized protein (TIGR00730 family) sig. 53 96
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS03100 TIGR00730 family Rossman fold protein insig. 57 96
o Ralstonia solanacearum UW163 UW163_RS10625 TIGR00730 family Rossman fold protein insig. 57 96
o Herbaspirillum seropedicae SmR1 HSERO_RS16435 LOG family protein insig. 50 96
o Ralstonia solanacearum PSI07 RPSI07_RS14205 TIGR00730 family Rossman fold protein insig. 55 96
o Ralstonia sp. UNC404CL21Col ABZR87_RS15005 TIGR00730 family Rossman fold protein insig. 54 97
o Lysobacter sp. OAE881 ABIE51_RS08970 TIGR00730 family Rossman fold protein insig. 52 96
o Cupriavidus basilensis FW507-4G11 RR42_RS05385 LOG family protein insig. 52 92
o Ralstonia solanacearum GMI1000 RS_RS10470 TIGR00730 family Rossman fold protein insig. 52 96
o Acinetobacter baumannii LAC-4 RR41_RS02060 TIGR00730 family Rossman fold protein insig. 49 99
o Klebsiella pneumoniae MKP103 KDGMDA_23505 TIGR00730 family Rossman fold protein insig. 50 98
o Klebsiella pneumoniae MRSN742743 KFA93_RS13825 TIGR00730 family Rossman fold protein insig. 50 98
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3415.1 Lysine decarboxylase family insig. 50 96
o Rhodanobacter sp. FW510-T8 OKGIIK_05925 TIGR00730 family Rossman fold protein insig. 49 97
o Rhodanobacter denitrificans MT42 LRK55_RS00740 TIGR00730 family Rossman fold protein insig. 49 97
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS05935 TIGR00730 family Rossman fold protein insig. 50 95
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS00965 TIGR00730 family Rossman fold protein insig. 49 97
o Marinobacter adhaerens HP15 HP15_3835 conserved hypothetical protein insig. 50 95
o Acinetobacter radioresistens SK82 MPMX26_02735 Putative cytokinin riboside 5'-monophosphate phosphoribohydrolase insig. 48 96
o Dickeya dadantii 3937 DDA3937_RS17825 TIGR00730 family Rossman fold protein insig. 46 97
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_15135 TIGR00730 family Rossman fold protein insig. 47 96
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS09145 TIGR00730 family Rossman fold protein insig. 48 95
o Acidovorax sp. GW101-3H11 Ac3H11_519 Lysine decarboxylase family insig. 50 94
o Sphingobium sp. HT1-2 GFF787 Lysine decarboxylase family cofit 48 93
o Sphingomonas koreensis DSMZ 15582 Ga0059261_2416 TIGR00730 family protein cofit 47 93
o Variovorax sp. SCN45 GFF1152 Lysine decarboxylase family insig. 50 96
  Acinetobacter radioresistens SK82 MPMX26_00134 Putative cytokinin riboside 5'-monophosphate phosphoribohydrolase insig. 47 92
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS10320 TIGR00730 family Rossman fold protein insig. 45 96
  Acinetobacter baumannii LAC-4 RR41_RS17955 TIGR00730 family Rossman fold protein insig. 51 89
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4273 Lysine decarboxylase family cofit 50 89
o Dickeya dianthicola 67-19 HGI48_RS17765 TIGR00730 family Rossman fold protein insig. 47 94
o Dickeya dianthicola ME23 DZA65_RS18910 TIGR00730 family Rossman fold protein insig. 47 94
o Variovorax sp. OAS795 ABID97_RS14855 TIGR00730 family Rossman fold protein insig. 50 97
o Desulfovibrio vulgaris Miyazaki F DvMF_1885 hypothetical protein (RefSeq) insig. 48 96
  Bosea sp. OAE506 ABIE41_RS01645 TIGR00730 family Rossman fold protein insig. 49 96
  Azospirillum brasilense Sp245 AZOBR_RS10990 lysine decarboxylase insig. 53 83
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0909 TIGR00730 family protein insig. 44 97
o Azospirillum sp. SherDot2 MPMX19_06138 Putative cytokinin riboside 5'-monophosphate phosphoribohydrolase insig. 49 95
o Bacteroides ovatus ATCC 8483 BACOVA_02921 TIGR00730 family protein insig. 45 96
o Castellaniella sp019104865 MT123 ABCV34_RS10940 TIGR00730 family Rossman fold protein insig. 48 96
o Bacteroides thetaiotaomicron VPI-5482 BT3224 putative lysine decarboxylase (NCBI ptt file) strong 46 91
o Fusobacterium nucleatum SB010 HUW76_07415 TIGR00730 family Rossman fold protein strong 39 97
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS06240 TIGR00730 family Rossman fold protein insig. 45 90
o Rhodopseudomonas palustris CGA009 TX73_010330 TIGR00730 family Rossman fold protein insig. 43 95
  Agrobacterium fabrum C58 Atu1066 hypothetical protein insig. 46 82
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS10665 Rossman fold protein, TIGR00730 family insig. 45 96
o Phocaeicola dorei CL03T12C01 ABI39_RS05550 TIGR00730 family Rossman fold protein insig. 43 95
  Rhizobium sp. OAE497 ABIE40_RS06210 TIGR00730 family Rossman fold protein insig. 46 83
o Dinoroseobacter shibae DFL-12 Dshi_1767 hypothetical protein (RefSeq) insig. 47 88
o Rhodospirillum rubrum S1H Rru_A0357 hypothetical protein (NCBI) cofit 48 89
  Sinorhizobium meliloti 1021 SMc02544 hypothetical protein insig. 46 81
o Bacteroides stercoris CC31F HMPREF1181_RS01670 TIGR00730 family Rossman fold protein insig. 49 83
o Xanthobacter sp. DMC5 GFF545 hypothetical protein insig. 45 90
o Phaeobacter inhibens DSM 17395 PGA1_c19080 TIGR00730 family protein insig. 48 80
o Mycobacterium tuberculosis H37Rv Rv1205 Conserved hypothetical protein strong 39 88
o Caulobacter crescentus NA1000 CCNA_01372 lysine decarboxylase family strong 39 92
o Caulobacter crescentus NA1000 Δfur CCNA_01372 lysine decarboxylase family cofit 39 92
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS08515 TIGR00730 family Rossman fold protein cofit 41 91
  Bacteroides ovatus ATCC 8483 BACOVA_00911 TIGR00730 family protein insig. 34 80
  Phocaeicola dorei CL03T12C01 ABI39_RS05115 TIGR00730 family Rossman fold protein insig. 31 90
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS11790 TIGR00730 family Rossman fold protein sig. 31 90
  Bacteroides thetaiotaomicron VPI-5482 BT3307 lysine decarboxylase (NCBI ptt file) no data 33 80
  Dechlorosoma suillum PS Dsui_0458 TIGR00730 family protein strong 28 89
  Methylophilus sp. DMC18 GFF1659 hypothetical protein cofit 27 88
  Herbaspirillum seropedicae SmR1 HSERO_RS02255 decarboxylase strong 28 88
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS10705 TIGR00730 family Rossman fold protein no data 30 62
  Desulfovibrio vulgaris Miyazaki F DvMF_0170 hypothetical protein (RefSeq) insig. 26 88
  Paraburkholderia sabiae LMG 24235 QEN71_RS17880 TIGR00730 family Rossman fold protein strong 26 93
  Acidovorax sp. GW101-3H11 Ac3H11_2594 FIG01199081: hypothetical protein strong 38 46
  Castellaniella sp019104865 MT123 ABCV34_RS02190 TIGR00730 family Rossman fold protein insig. 29 82
  Cellulophaga baltica 18 M666_RS15450 TIGR00730 family Rossman fold protein no data 24 90
  Bosea sp. OAE506 ABIE41_RS22580 TIGR00730 family Rossman fold protein insig. 30 93
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS04970 Rossman fold protein, TIGR00730 family strong 28 69
  Desulfovibrio vulgaris Hildenborough JW710 DVU1529 decarboxylase family protein (TIGR) insig. 26 83
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3842 FIG01199081: hypothetical protein strong 30 80
  Burkholderia phytofirmans PsJN BPHYT_RS33615 decarboxylase insig. 25 88
  Variovorax sp. SCN45 GFF2862 FIG01199081: hypothetical protein insig. 38 47
  Paraburkholderia graminis OAS925 ABIE53_004851 uncharacterized protein (TIGR00730 family) strong 25 88
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1206 TIGR00730 family protein strong 23 90
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_18115 Rossman fold protein, TIGR00730 family no data 30 59
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06023 hypothetical protein strong 27 89
  Rhodanobacter denitrificans MT42 LRK55_RS13885 TIGR00730 family Rossman fold protein insig. 28 76
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS14165 TIGR00730 family Rossman fold protein insig. 28 76
  Castellaniella sp019104865 MT123 ABCV34_RS05995 TIGR00730 family Rossman fold protein insig. 34 46
  Cupriavidus basilensis FW507-4G11 RR42_RS15055 hypothetical protein strong 24 88
  Synechococcus elongatus PCC 7942 Synpcc7942_2520 hypothetical protein sig. 30 67
  Caulobacter crescentus NA1000 CCNA_00853 3-isopropylmalate dehydrogenase strong 29 73
  Caulobacter crescentus NA1000 Δfur CCNA_00853 3-isopropylmalate dehydrogenase cofit 29 73
  Ralstonia sp. UNC404CL21Col ABZR87_RS15685 TIGR00730 family Rossman fold protein strong 26 86
  Ralstonia solanacearum GMI1000 RS_RS11200 TIGR00730 family Rossman fold protein sig. 25 86
  Phaeobacter inhibens DSM 17395 PGA1_c36280 TIGR00730 family protein insig. 24 93
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS14445 TIGR00730 family Rossman fold protein insig. 26 76
  Pseudomonas sp. S08-1 OH686_18215 Decarboxylase family protein insig. 35 68
  Marinobacter adhaerens HP15 HP15_1322 conserved hypothetical protein insig. 24 83
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS03755 TIGR00730 family Rossman fold protein cofit 24 86
  Ralstonia solanacearum UW163 UW163_RS09915 TIGR00730 family Rossman fold protein insig. 24 86
  Ralstonia solanacearum PSI07 RPSI07_RS15425 TIGR00725 family protein no data 38 52
  Ralstonia solanacearum PSI07 RPSI07_RS13475 TIGR00730 family Rossman fold protein cofit 24 86
  Magnetospirillum magneticum AMB-1 AMB_RS06140 LOG family protein cofit 32 38
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS05510 TIGR00730 family Rossman fold protein insig. 31 62
  Pseudomonas syringae pv. syringae B728a Psyr_1380 Conserved hypothetical protein 730 insig. 28 97
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1380 Conserved hypothetical protein 730 insig. 28 97
  Dinoroseobacter shibae DFL-12 Dshi_0004 hypothetical protein (RefSeq) insig. 28 74
  Pseudomonas fluorescens FW300-N2C3 AO356_05660 cytochrome D ubiquinol oxidase subunit II insig. 29 52
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3145 Decarboxylase family protein insig. 31 52
  Pseudomonas segetis P6 ACVTMO_RS16490 LOG family protein insig. 30 79
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4666 Decarboxylase family protein insig. 27 96
  Pseudomonas sp. RS175 PFR28_00474 hypothetical protein insig. 29 52
  Bifidobacterium breve UCC2003 BBR_RS14545 TIGR00730 family Rossman fold protein insig. 27 60
  Pseudomonas protegens RBAN4 FABNJH_06455 AMP nucleosidase insig. 32 69
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2991 decarboxylase insig. 29 52
  Pseudomonas orientalis W4I3 QF045_RS08740 TIGR00730 family Rossman fold protein insig. 34 68
  Pseudomonas aeruginosa MRSN321 DY961_RS14905 LOG family protein insig. 30 51
  Pseudomonas aeruginosa PA14 IKLFDK_18455 cytochrome D ubiquinol oxidase subunit II strong 30 51