Homologs of GFF3112 from Sphingobium sp. HT1-2

Transcriptional regulator AmpR, LysR family
SEED: Glycine cleavage system transcriptional activator

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sphingobium sp. HT1-2 GFF3112 Transcriptional regulator AmpR, LysR family cofit 100 100
o Sphingomonas koreensis DSMZ 15582 Ga0059261_3144 Transcriptional regulator insig. 76 98
o Azospirillum brasilense Sp245 AZOBR_RS23560 LysR family transcriptional regulator insig. 69 99
o Azospirillum sp. SherDot2 MPMX19_00517 HTH-type transcriptional activator AmpR insig. 66 100
o Herbaspirillum seropedicae SmR1 HSERO_RS16765 LysR family transcriptional regulator sig. 67 96
o Paraburkholderia sabiae LMG 24235 QEN71_RS21560 LysR family transcriptional regulator insig. 64 99
o Acidovorax sp. GW101-3H11 Ac3H11_902 Glycine cleavage system transcriptional activator no data 65 96
o Paraburkholderia graminis OAS925 ABIE53_004463 LysR family transcriptional regulator of beta-lactamase insig. 64 97
o Rhizobium sp. OAE497 ABIE40_RS05755 LysR family transcriptional regulator insig. 61 98
o Pseudomonas aeruginosa PA14 IKLFDK_21165 LysR family transcriptional regulator AmpR insig. 63 98
o Burkholderia phytofirmans PsJN BPHYT_RS19955 LysR family transcriptional regulator insig. 63 97
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03788 transcriptional regulator, LysR family insig. 64 97
o Agrobacterium fabrum C58 Atu3078 LysR family transcriptional regulator strong 61 99
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_72 Transcriptional regulator, LysR family insig. 61 99
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1943 Glycine cleavage system transcriptional activator no data 63 98
o Pseudomonas fluorescens SBW25 PFLU_RS16910 LysR family transcriptional regulator insig. 61 98
o Pseudomonas fluorescens SBW25-INTG PFLU_RS16910 LysR family transcriptional regulator sig. 61 98
o Pseudomonas sp. SVBP6 COO64_RS07775 LysR family transcriptional regulator insig. 60 99
o Pseudomonas simiae WCS417 PS417_14890 LysR family transcriptional regulator insig. 59 99
o Pseudomonas lactucae CFBP13502 GEMAOFIL_03295 HTH-type transcriptional activator AmpR cofit 59 99
o Pseudomonas sp. DMC3 GFF1414 HTH-type transcriptional activator AmpR insig. 60 98
o Serratia liquefaciens MT49 IAI46_11610 LysR family transcriptional regulator insig. 58 97
o Sinorhizobium meliloti 1021 SMa2293 beta lactamase transcriptional activator insig. 61 98
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1418.1 Glycine cleavage system transcriptional activator no data 64 98
o Enterobacter asburiae PDN3 EX28DRAFT_3351 Transcriptional regulator insig. 56 98
o Erwinia amylovora T8 OLJFJH_08030 LysR family transcriptional regulator AmpR insig. 56 97
o Enterobacter sp. TBS_079 MPMX20_00433 HTH-type transcriptional activator AmpR insig. 56 98
o Bosea sp. OAE506 ABIE41_RS18995 LysR family transcriptional regulator insig. 57 98
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1560 Glycine cleavage system transcriptional activator GcvA insig. 40 97
  Kangiella aquimarina DSM 16071 B158DRAFT_0909 Transcriptional regulator strong 38 99
o Pseudomonas putida KT2440 PP_0661 putative Transcriptional regulator AmpR insig. 44 96
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4960 Transcriptional regulator, LysR family insig. 41 96
o Pseudomonas fluorescens FW300-N2C3 AO356_15125 LysR family transcriptional regulator insig. 41 96
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS09680 transcriptional regulator GcvA strong 40 98
o Rhodospirillum rubrum S1H Rru_A2214 Transcriptional Regulator, LysR family (NCBI) cofit 43 98
  Shewanella loihica PV-4 Shew_2764 DNA-binding transcriptional activator GcvA (RefSeq) no data 38 98
o Caulobacter crescentus NA1000 CCNA_01174 LysR-family transcriptional regulator strong 41 96
o Caulobacter crescentus NA1000 Δfur CCNA_01174 LysR-family transcriptional regulator insig. 41 96
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02417 Glycine cleavage system transcriptional activator cofit 40 96
o Klebsiella pneumoniae MKP103 KDGMDA_19585 LysR family transcriptional regulator sig. 41 96
  Shewanella amazonensis SB2B Sama_2429 DNA-binding transcriptional activator GcvA (RefSeq) strong 38 98
  Azospirillum sp. SherDot2 MPMX19_05381 Glycine cleavage system transcriptional activator insig. 42 95
  Burkholderia phytofirmans PsJN BPHYT_RS33620 transcriptional regulator insig. 40 98
  Azospirillum brasilense Sp245 AZOBR_RS20105 transcriptional regulator insig. 39 96
  Enterobacter sp. TBS_079 MPMX20_03671 Glycine cleavage system transcriptional activator strong 37 96
  Paraburkholderia sabiae LMG 24235 QEN71_RS17875 transcriptional regulator GcvA insig. 38 100
  Shewanella oneidensis MR-1 SO1533 glycine cleavage system transcriptional activator, putative (NCBI ptt file) strong 37 98
  Enterobacter asburiae PDN3 EX28DRAFT_2883 Transcriptional regulator insig. 37 96
  Shewanella sp. ANA-3 Shewana3_2894 DNA-binding transcriptional activator GcvA (RefSeq) no data 37 98
  Klebsiella michiganensis M5al BWI76_RS22955 transcriptional regulator GcvA strong 37 96
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS17345 transcriptional regulator GcvA insig. 40 96
  Escherichia coli BL21 ECD_02659 glycine cleavage system transcriptional activator; autorepressor strong 36 96
  Escherichia fergusonii Becca EFB2_01109 Glycine cleavage system transcriptional activator insig. 36 96
  Escherichia coli ECOR27 NOLOHH_12000 gcvA glycine cleavage system transcriptional regulator GcvA strong 36 96
  Escherichia coli ECOR38 HEPCGN_19375 gcvA glycine cleavage system transcriptional regulator GcvA strong 36 96
  Escherichia coli ECRC100 OKFHMN_20120 gcvA glycine cleavage system transcriptional regulator GcvA cofit 36 96
  Escherichia coli ECRC101 MCAODC_10645 gcvA glycine cleavage system transcriptional regulator GcvA sig. 36 96
  Escherichia coli ECRC102 NIAGMN_17890 gcvA glycine cleavage system transcriptional regulator GcvA sig. 36 96
  Escherichia coli ECRC62 BNILDI_10505 gcvA glycine cleavage system transcriptional regulator GcvA cofit 36 96
  Escherichia coli ECRC98 JDDGAC_23785 gcvA glycine cleavage system transcriptional regulator GcvA insig. 36 96
  Escherichia coli ECRC99 KEDOAH_08010 gcvA glycine cleavage system transcriptional regulator GcvA no data 36 96
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00923 Glycine cleavage system transcriptional activator insig. 36 96
  Escherichia coli Nissle 1917 ECOLIN_RS15650 glycine cleavage system transcriptional regulator GcvA strong 36 96
  Escherichia coli BW25113 b2808 gcvA DNA-binding transcriptional dual regulator (NCBI) strong 36 96
  Erwinia amylovora T8 OLJFJH_09170 Glycine cleavage system transcriptional activator cofit 37 96
  Azospirillum sp. SherDot2 MPMX19_01055 Glycine cleavage system transcriptional activator insig. 39 98
o Ralstonia solanacearum UW163 UW163_RS22635 transcriptional regulator GcvA insig. 38 98
  Ralstonia sp. UNC404CL21Col ABZR87_RS15205 transcriptional regulator GcvA insig. 39 96
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS22095 transcriptional regulator GcvA insig. 38 98
  Sphingobium sp. HT1-2 GFF3427 Transcriptional regulator, LysR family cofit 38 96
  Paraburkholderia graminis OAS925 ABIE53_004850 LysR family glycine cleavage system transcriptional activator insig. 39 98
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06024 transcriptional regulator, LysR family insig. 39 98
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4865 Glycine cleavage system transcriptional activator GcvA sig. 36 96
  Pseudomonas sp. SVBP6 COO64_RS14470 gcvA transcriptional regulator GcvA insig. 41 95
  Pantoea sp. MT58 IAI47_04025 transcriptional regulator GcvA sig. 35 96
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS16945 transcriptional regulator GcvA cofit 35 96
  Rhodospirillum rubrum S1H Rru_A2215 Transcriptional Regulator, LysR family (NCBI) cofit 40 99
o Variovorax sp. SCN45 GFF1358 Transcriptional regulator, LysR family insig. 40 96
  Rhodospirillum rubrum S1H Rru_A0785 Transcriptional Regulator, LysR family (NCBI) insig. 40 96
  Pectobacterium carotovorum WPP14 HER17_RS16415 transcriptional regulator GcvA cofit 35 96
  Paraburkholderia graminis OAS925 ABIE53_001336 LysR family glycine cleavage system transcriptional activator sig. 37 96
  Rhizobium sp. OAE497 ABIE40_RS13760 LysR substrate-binding domain-containing protein cofit 36 96
  Vibrio cholerae E7946 ATCC 55056 CSW01_04590 transcriptional regulator GcvA insig. 36 98
  Azospirillum sp. SherDot2 MPMX19_06950 Glycine cleavage system transcriptional activator insig. 40 98
o Variovorax sp. OAS795 ABID97_RS15795 LysR substrate-binding domain-containing protein no data 39 94
  Serratia liquefaciens MT49 IAI46_20340 transcriptional regulator GcvA insig. 35 96
  Rahnella sp. WP5 EX31_RS13110 transcriptional regulator GcvA insig. 35 96
  Alteromonas macleodii MIT1002 MIT1002_01520 Gcv operon activator insig. 36 98
  Pseudomonas simiae WCS417 PS417_00575 LysR family transcriptional regulator insig. 35 98
o Acinetobacter radioresistens SK82 MPMX26_01927 Glycine cleavage system transcriptional activator no data 35 97
  Dickeya dianthicola ME23 DZA65_RS05390 transcriptional regulator GcvA insig. 36 96
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS20860 transcriptional regulator GcvA insig. 38 99
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS10360 LysR substrate-binding domain-containing protein insig. 38 96
  Dickeya dianthicola 67-19 HGI48_RS05050 transcriptional regulator GcvA cofit 35 96
  Pseudomonas fluorescens SBW25 PFLU_RS00560 LysR family transcriptional regulator insig. 35 98
  Pseudomonas fluorescens SBW25-INTG PFLU_RS00560 LysR family transcriptional regulator insig. 35 98
  Paraburkholderia sabiae LMG 24235 QEN71_RS36355 LysR family transcriptional regulator insig. 38 94
  Burkholderia phytofirmans PsJN BPHYT_RS11810 LysR family transcriptional regulator insig. 37 96
  Dickeya dadantii 3937 DDA3937_RS05050 transcriptional regulator GcvA cofit 35 96
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_17275 gcvA Glycine cleavage system transcriptional activator cofit 35 96