Homologs of GFF2441 from Variovorax sp. SCN45

RND efflux system, inner membrane transporter
SEED: RND efflux system, inner membrane transporter CmeB

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF2441 RND efflux system, inner membrane transporter insig. 100 100
o Dickeya dadantii 3937 DDA3937_RS14120 multidrug efflux RND transporter permease subunit insig. 63 99
o Dickeya dianthicola 67-19 HGI48_RS14120 efflux RND transporter permease subunit insig. 63 99
o Enterobacter sp. TBS_079 MPMX20_00057 Multidrug resistance protein MexB insig. 65 99
o Dickeya dianthicola ME23 DZA65_RS14780 multidrug efflux RND transporter permease subunit cofit 63 99
o Enterobacter asburiae PDN3 EX28DRAFT_3934 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family insig. 64 99
o Escherichia coli ECOR38 HEPCGN_25705 adeB hydrophobe/amphiphile efflux-1 family RND transporter insig. 64 99
o Escherichia coli Nissle 1917 ECOLIN_RS07790 efflux RND transporter permease subunit insig. 64 99
o Escherichia fergusonii Becca EFB2_02633 Multidrug resistance protein MexB insig. 64 99
o Klebsiella pneumoniae MKP103 KDGMDA_08335 multidrug efflux RND transporter permease subunit EefB insig. 64 99
o Klebsiella michiganensis M5al BWI76_RS27695 multidrug efflux RND transporter permease subunit insig. 63 99
o Pantoea sp. MT58 IAI47_21430 multidrug efflux RND transporter permease subunit insig. 62 99
o Rahnella sp. WP5 EX31_RS00460 multidrug efflux RND transporter permease subunit insig. 63 99
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS12565 efflux RND transporter permease subunit cofit 61 99
o Escherichia coli ECRC101 MCAODC_15775 adeB hydrophobe/amphiphile efflux-1 family RND transporter insig. 64 94
o Escherichia coli ECRC98 JDDGAC_05040 adeB hydrophobe/amphiphile efflux-1 family RND transporter insig. 64 94
o Escherichia coli ECRC99 KEDOAH_26280 adeB hydrophobe/amphiphile efflux-1 family RND transporter no data 64 94
  Caulobacter crescentus NA1000 CCNA_00850 cation/multidrug efflux pump acrB2 strong 61 97
  Caulobacter crescentus NA1000 Δfur CCNA_00850 cation/multidrug efflux pump acrB2 cofit 61 97
o Escherichia coli ECRC100 OKFHMN_02495 adeB hydrophobe/amphiphile efflux-1 family RND transporter cofit 63 94
o Escherichia coli ECRC102 NIAGMN_26665 adeB hydrophobe/amphiphile efflux-1 family RND transporter cofit 63 94
  Methylophilus sp. DMC18 GFF2593 Multidrug efflux pump subunit AcrB insig. 58 98
  Bosea sp. OAE506 ABIE41_RS01595 efflux RND transporter permease subunit insig. 60 99
  Azospirillum brasilense Sp245 AZOBR_RS30185 multidrug transporter insig. 58 100
  Klebsiella pneumoniae MKP103 KDGMDA_14835 acriflavine resistance protein B strong 58 97
o Serratia liquefaciens MT49 IAI46_12710 efflux RND transporter permease subunit insig. 62 99
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4379 RND efflux system, inner membrane transporter CmeB sig. 57 97
  Azospirillum sp. SherDot2 MPMX19_05884 Multidrug efflux pump subunit AcrB insig. 58 99
  Escherichia coli BL21 ECD_00413 multidrug efflux system protein strong 57 97
  Escherichia fergusonii Becca EFB2_03596 Multidrug efflux pump subunit AcrB insig. 57 97
  Escherichia coli ECOR27 NOLOHH_01140 acrB efflux RND transporter permease AcrB insig. 57 97
  Escherichia coli ECOR38 HEPCGN_06820 acrB efflux RND transporter permease AcrB strong 57 97
  Escherichia coli ECRC62 BNILDI_22555 acrB efflux RND transporter permease AcrB insig. 57 97
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03212 Multidrug efflux pump subunit AcrB cofit 57 97
  Escherichia coli Nissle 1917 ECOLIN_RS02750 efflux RND transporter permease AcrB sig. 57 97
  Escherichia coli BW25113 b0462 acrB multidrug efflux system protein (NCBI) strong 57 97
  Enterobacter asburiae PDN3 EX28DRAFT_2496 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family cofit 57 97
  Escherichia coli ECRC100 OKFHMN_08205 acrB efflux RND transporter permease AcrB cofit 57 97
  Escherichia coli ECRC101 MCAODC_27430 acrB efflux RND transporter permease AcrB strong 57 97
  Escherichia coli ECRC102 NIAGMN_06260 acrB efflux RND transporter permease AcrB cofit 57 97
  Escherichia coli ECRC99 KEDOAH_19760 acrB efflux RND transporter permease AcrB no data 57 97
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_16580 adeB hydrophobe/amphiphile efflux-1 family RND transporter no data 58 97
  Desulfovibrio vulgaris Hildenborough JW710 DVU2816 multidrug resistance protein (TIGR) sig. 57 99
  Erwinia tracheiphila SCR3 LU632_RS18185 efflux RND transporter permease subunit no data 58 97
o Sphingomonas koreensis DSMZ 15582 Ga0059261_0559 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family insig. 61 98
  Rahnella sp. WP5 EX31_RS22470 multidrug efflux RND transporter permease subunit cofit 57 97
o Sphingobium sp. HT1-2 GFF4625 RND efflux system, inner membrane transporter cofit 60 99
  Klebsiella michiganensis M5al BWI76_RS06775 multidrug efflux RND transporter permease subunit strong 57 97
  Variovorax sp. SCN45 GFF5990 RND efflux system, inner membrane transporter insig. 57 99
  Enterobacter sp. TBS_079 MPMX20_01064 Multidrug efflux pump subunit AcrB strong 57 97
  Shewanella amazonensis SB2B Sama_3554 AcrB/AcrD/AcrF family protein (RefSeq) strong 57 99
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1794.1 RND efflux system, inner membrane transporter CmeB insig. 57 99
  Klebsiella pneumoniae MKP103 KDGMDA_06465 hydrophobe/amphiphile efflux-1 family RND transporter insig. 56 97
  Serratia liquefaciens MT49 IAI46_05185 multidrug efflux RND transporter permease subunit SdeY strong 58 97
  Shewanella sp. ANA-3 Shewana3_4045 hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) strong 57 98
  Erwinia amylovora T8 OLJFJH_17855 multidrug efflux RND transporter permease subunit AcrB strong 57 97
  Enterobacter sp. TBS_079 MPMX20_03331 Multidrug efflux pump subunit AcrB insig. 56 98
  Shewanella oneidensis MR-1 SO4692 AcrB/AcrD/AcrF family protein (NCBI ptt file) strong 57 99
  Rhizobium sp. OAE497 ABIE40_RS24225 efflux RND transporter permease subunit insig. 58 98
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS10680 multidrug efflux RND transporter permease subunit cofit 57 97
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2116 RND efflux system, inner membrane transporter CmeB insig. 56 97
  Pantoea sp. MT58 IAI47_14515 multidrug efflux RND transporter permease subunit cofit 57 97
  Klebsiella michiganensis M5al BWI76_RS25585 multidrug efflux RND transporter permease subunit insig. 56 97
  Klebsiella pneumoniae MKP103 KDGMDA_27695 multidrug efflux RND transporter permease AcrD insig. 57 98
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2188 RND efflux system, inner membrane transporter CmeB cofit 56 98
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS19190 efflux RND transporter permease subunit strong 58 97
  Enterobacter asburiae PDN3 EX28DRAFT_0191 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family insig. 56 98
  Escherichia coli Nissle 1917 ECOLIN_RS14090 multidrug efflux RND transporter permease AcrD insig. 56 98
  Pantoea sp. MT58 IAI47_05310 multidrug efflux RND transporter permease AcrD insig. 56 98
  Enterobacter asburiae PDN3 EX28DRAFT_3319 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family insig. 57 97
  Escherichia fergusonii Becca EFB2_01418 Multidrug efflux pump subunit AcrB insig. 56 98
  Escherichia coli BL21 ECD_02361 aminoglycoside/multidrug efflux system sig. 56 98
  Escherichia coli ECOR38 HEPCGN_21140 acrD multidrug efflux RND transporter permease AcrD insig. 56 98
  Escherichia coli ECRC62 BNILDI_12460 acrD multidrug efflux RND transporter permease AcrD insig. 56 98
  Escherichia coli BW25113 b2470 acrD aminoglycoside/multidrug efflux system (NCBI) strong 56 98
  Klebsiella michiganensis M5al BWI76_RS20860 aminoglycoside/multidrug transporter subunit AcrD insig. 56 98
  Escherichia coli ECOR27 NOLOHH_13650 acrD multidrug efflux RND transporter permease AcrD insig. 56 98
  Pseudomonas sp. S08-1 OH686_16050 Multidrug efflux system, inner membrane proton/drug antiporter (RND type) cofit 57 98
  Ralstonia solanacearum GMI1000 RS_RS21030 multidrug efflux RND transporter permease subunit insig. 56 98
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS19855 multidrug efflux RND transporter permease AcrD cofit 56 98
  Escherichia coli ECRC100 OKFHMN_21970 acrD multidrug efflux RND transporter permease AcrD cofit 56 98
  Escherichia coli ECRC101 MCAODC_12500 acrD multidrug efflux RND transporter permease AcrD insig. 56 98
  Escherichia coli ECRC102 NIAGMN_19740 acrD multidrug efflux RND transporter permease AcrD cofit 56 98
  Escherichia coli ECRC98 JDDGAC_25915 acrD multidrug efflux RND transporter permease AcrD insig. 56 98
  Escherichia coli ECRC99 KEDOAH_06250 acrD multidrug efflux RND transporter permease AcrD no data 56 98
  Burkholderia phytofirmans PsJN BPHYT_RS16170 multidrug efflux RND transporter permease subunit no data 55 100
  Escherichia fergusonii Becca EFB2_00558 Multidrug export protein AcrF insig. 56 97
  Escherichia coli ECOR27 NOLOHH_09440 acrF multidrug efflux RND transporter permease subunit AcrF insig. 56 97
  Escherichia coli ECRC62 BNILDI_02080 acrF multidrug efflux RND transporter permease subunit AcrF insig. 56 97
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00439 Multidrug export protein AcrF insig. 56 97
  Escherichia coli Nissle 1917 ECOLIN_RS18755 multidrug efflux RND transporter permease subunit AcrF insig. 56 97
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01261 Multidrug efflux pump subunit AcrB insig. 56 98
  Serratia liquefaciens MT49 IAI46_18690 multidrug efflux RND transporter permease AcrD insig. 55 98
  Pectobacterium carotovorum WPP14 HER17_RS15740 multidrug efflux RND transporter permease subunit cofit 56 97
  Herbaspirillum seropedicae SmR1 HSERO_RS23055 multidrug transporter insig. 56 99
  Pseudomonas aeruginosa MRSN321 DY961_RS22115 mexB;inference=COORDINATES multidrug efflux RND transporter permease subunit MexB strong 56 98
  Pseudomonas aeruginosa PA14 IKLFDK_23290 multidrug efflux RND transporter permease subunit MexB strong 56 98
  Pseudomonas aeruginosa PUPa3 DQ20_RS37190 mexB;inference=COORDINATES multidrug efflux RND transporter permease subunit MexB cofit 56 98
  Escherichia coli BL21 ECD_03124 multidrug efflux system protein insig. 56 97
  Enterobacter sp. TBS_079 MPMX20_04175 Multidrug export protein AcrF insig. 56 97