Homologs of GFF2200 from Variovorax sp. SCN45

sigma-54-dependent transcriptional regulator
SEED: Sigma-54 dependent transcriptional regulator

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF2200 sigma-54-dependent transcriptional regulator insig. 100 100
o Variovorax sp. OAS795 ABID97_RS24330 sigma 54-interacting transcriptional regulator insig. 92 100
o Burkholderia phytofirmans PsJN BPHYT_RS08215 Fis family transcriptional regulator insig. 64 100
o Paraburkholderia graminis OAS925 ABIE53_002431 DNA-binding NtrC family response regulator insig. 64 100
o Ralstonia solanacearum PSI07 RPSI07_RS05015 sigma-54-dependent Fis family transcriptional regulator insig. 56 98
o Ralstonia solanacearum GMI1000 RS_RS22325 sigma-54-dependent Fis family transcriptional regulator insig. 56 98
o Ralstonia sp. UNC404CL21Col ABZR87_RS19575 sigma-54-dependent Fis family transcriptional regulator sig. 55 98
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS18540 sigma-54-dependent Fis family transcriptional regulator insig. 55 98
o Ralstonia solanacearum UW163 UW163_RS20590 sigma-54-dependent Fis family transcriptional regulator insig. 55 98
o Cupriavidus basilensis FW507-4G11 RR42_RS35955 Fis family transcriptional regulator insig. 54 97
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS05020 sigma-54 dependent transcriptional regulator strong 41 69
  Marinobacter adhaerens HP15 HP15_523 two component, sigma54 specific, transcriptional regulator, Fis family strong 41 69
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS11070 sigma-54 dependent transcriptional regulator cofit 42 70
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS04990 sigma-54 dependent transcriptional regulator cofit 41 69
  Rhodopseudomonas palustris CGA009 TX73_007390 sigma-54-dependent Fis family transcriptional regulator insig. 36 69
  Rhodanobacter denitrificans MT42 LRK55_RS04800 sigma-54 dependent transcriptional regulator cofit 39 69
  Rhodanobacter sp. FW510-T8 OKGIIK_01730 atoC sigma-54-dependent Fis family transcriptional regulator cofit 40 69
  Ralstonia sp. UNC404CL21Col ABZR87_RS23520 sigma-54 dependent transcriptional regulator insig. 39 77
  Paraburkholderia sabiae LMG 24235 QEN71_RS42175 nif-specific transcriptional activator NifA insig. 37 73
  Paraburkholderia graminis OAS925 ABIE53_005506 transcriptional regulator of acetoin/glycerol metabolism strong 40 64
  Alteromonas macleodii MIT1002 MIT1002_01081 Nitrogen assimilation regulatory protein cofit 37 69
  Pseudomonas sp. SVBP6 COO64_RS13325 ntrC nitrogen regulation protein NR(I) insig. 36 86
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_09510 sigma-54-dependent Fis family transcriptional regulator sig. 36 74
  Desulfovibrio vulgaris Miyazaki F DvMF_1213 sigma54 specific transcriptional regulator, Fis family (RefSeq) insig. 36 73
  Pseudomonas fluorescens GW456-L13 PfGW456L13_347 Nitrogen regulation protein NR(I) strong 36 86
  Pseudomonas aeruginosa PA14 IKLFDK_00790 two-component response regulator PilR strong 35 86
  Pseudomonas aeruginosa PUPa3 DQ20_RS56175 pilR;inference=COORDINATES two-component system response regulator PilR strong 35 86
  Methylophilus sp. DMC18 GFF1426 Transcriptional regulatory protein ZraR insig. 39 68
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS23310 sigma-54-dependent Fis family transcriptional regulator strong 39 70
  Ralstonia solanacearum UW163 UW163_RS16560 sigma-54-dependent Fis family transcriptional regulator strong 39 70
  Pseudomonas aeruginosa MRSN321 DY961_RS23710 pilR;inference=COORDINATES two-component system response regulator PilR strong 35 86
  Pseudomonas fluorescens FW300-N2E3 AO353_12145 nitrogen regulation protein NR(I) strong 36 86
  Rahnella sp. WP5 EX31_RS15395 nif-specific transcriptional activator NifA insig. 39 69
  Ralstonia solanacearum GMI1000 RS_RS25110 sigma-54-dependent Fis family transcriptional regulator cofit 39 69
  Desulfovibrio vulgaris Miyazaki F DvMF_2149 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) strong 38 78
  Pseudomonas syringae pv. syringae B728a Psyr_4822 Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) sig. 36 86
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4822 Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) no data 36 86
  Pseudomonas sp. DMC3 GFF4081 DNA-binding transcriptional regulator NtrC strong 35 86
  Desulfovibrio vulgaris Hildenborough JW710 DVU2934 ntrX sigma-54 dependent transcriptional regulator/response regulator (TIGR) no data 37 72
  Pseudomonas fluorescens SBW25 PFLU_RS05610 sigma-54-dependent Fis family transcriptional regulator strong 36 81
  Pseudomonas fluorescens SBW25-INTG PFLU_RS05610 sigma-54-dependent Fis family transcriptional regulator strong 36 81
  Azospirillum sp. SherDot2 MPMX19_03461 Regulatory protein AtoC insig. 40 69
  Variovorax sp. OAS795 ABID97_RS06460 sigma 54-interacting transcriptional regulator cofit 39 69
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3826 Nitrogen regulation protein NR(I) strong 35 86
  Vibrio cholerae E7946 ATCC 55056 CSW01_13865 nitrogen regulation protein NR(I) insig. 33 86
  Pseudomonas fluorescens FW300-N2C3 AO356_09730 nitrogen regulation protein NR(I) strong 35 86
  Desulfovibrio vulgaris Hildenborough JW710 DVU0118 ntrC sigma-54 dependent transcriptional regulator/response regulator (TIGR) insig. 40 69
  Pseudomonas stutzeri RCH2 Psest_0705 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains strong 38 75
  Azospirillum brasilense Sp245 AZOBR_RS29300 Fis family transcriptional regulator insig. 36 70
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01292 Regulatory protein AtoC cofit 36 81
  Pseudomonas sp. RS175 PFR28_04944 DNA-binding transcriptional regulator NtrC strong 35 86
  Pseudomonas simiae WCS417 PS417_15295 Fis family transcriptional regulator insig. 39 71
  Cupriavidus basilensis FW507-4G11 RR42_RS03980 Fis family transcriptional regulator strong 36 86
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1611 Nitrogen regulation protein NR(I) strong 35 86
  Paraburkholderia sabiae LMG 24235 QEN71_RS19345 sigma-54 dependent transcriptional regulator no data 38 71
  Pseudomonas fluorescens FW300-N2E3 AO353_16225 Fis family transcriptional regulator insig. 37 72
  Pseudomonas fluorescens SBW25 PFLU_RS01685 nitrogen regulation protein NR(I) sig. 35 86
  Pseudomonas fluorescens SBW25-INTG PFLU_RS01685 nitrogen regulation protein NR(I) strong 35 86
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00547 DNA-binding transcriptional regulator NtrC insig. 35 86
  Pseudomonas simiae WCS417 PS417_01635 nitrogen regulation protein NR(I) strong 35 86
  Marinobacter adhaerens HP15 HP15_425 two-component response regulator NtrC strong 38 68
  Pseudomonas sp. BP01 JOY50_RS09450 ntrC nitrogen regulation protein NR(I) cofit 35 86
  Shewanella loihica PV-4 Shew_3561 nitrogen metabolism transcriptional regulator, NtrC, Fis family (RefSeq) strong 34 81
  Shewanella amazonensis SB2B Sama_2301 response regulator receiver protein (RefSeq) strong 38 68
  Pseudomonas sp. S08-1 OH686_02855 Flagellar regulatory protein FleQ cofit 38 78
  Pseudomonas sp. S08-1 OH686_13325 Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake cofit 36 81
  Pseudomonas orientalis W4I3 QF045_RS04705 nitrogen regulation protein NR(I) insig. 36 86
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF610 Putative sensory histidine kinase YfhA insig. 46 53
  Variovorax sp. SCN45 GFF7323 Transcriptional response regulatory protein GlrR insig. 38 69
  Pseudomonas aeruginosa MRSN321 DY961_RS11455 ntrC;inference=COORDINATES two-component system response regulator NtrC strong 36 86
  Pseudomonas aeruginosa PA14 IKLFDK_27895 two-component system response regulator NtrC insig. 36 86
  Pseudomonas aeruginosa PUPa3 DQ20_RS50645 ntrC;inference=COORDINATES two-component system response regulator NtrC strong 36 86
  Pseudomonas fluorescens FW300-N2C3 AO356_18205 Fis family transcriptional regulator insig. 37 73
  Pseudomonas sp. S08-1 OH686_10640 nitrogen regulation protein NR(I) cofit 35 86
  Vibrio cholerae E7946 ATCC 55056 CSW01_14720 sigma-54-dependent Fis family transcriptional regulator insig. 33 93
  Pseudomonas sp. SVBP6 COO64_RS07975 sigma-54 dependent transcriptional regulator insig. 39 68
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS14460 sigma-54 dependent transcriptional regulator insig. 38 69
  Cupriavidus basilensis FW507-4G11 RR42_RS12980 chemotaxis protein CheY strong 40 67
  Dickeya dianthicola ME23 DZA65_RS19920 nif-specific transcriptional activator NifA insig. 39 70
  Acidovorax sp. GW101-3H11 Ac3H11_4011 Putative sensory histidine kinase YfhA sig. 39 69
  Pseudomonas segetis P6 ACVTMO_RS19460 sigma-54-dependent transcriptional regulator cofit 39 69
  Pseudomonas aeruginosa MRSN321 DY961_RS03885 norR;go_function=DNA-binding nitric oxide reductase transcriptional regulator NorR insig. 39 71
  Pseudomonas aeruginosa PA14 IKLFDK_13385 nitric oxide reductase transcriptional regulator NorR sig. 39 71
  Pseudomonas aeruginosa PUPa3 DQ20_RS34920 norR;go_function=DNA-binding nitric oxide reductase transcriptional regulator NorR insig. 39 71
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01307 Transcriptional regulator of acetoin/glycerol metabolism insig. 38 64
  Pseudomonas aeruginosa MRSN321 DY961_RS06965 fleQ;inference=COORDINATES transcriptional regulator FleQ strong 38 78
  Pseudomonas aeruginosa PA14 IKLFDK_05045 transcriptional regulator FleQ strong 38 78
  Pseudomonas aeruginosa PUPa3 DQ20_RS45870 fleQ;inference=COORDINATES transcriptional regulator FleQ strong 38 78
  Shewanella oneidensis MR-1 SO3232 flrA flagellar regulatory protein A (NCBI ptt file) strong 37 68
  Shewanella loihica PV-4 Shew_1362 sigma-54 dependent trancsriptional regulator (RefSeq) strong 37 68
  Pseudomonas segetis P6 ACVTMO_RS21260 ntrC nitrogen regulation protein NR(I) strong 36 71
  Shewanella sp. ANA-3 Shewana3_2849 sigma-54 dependent trancsriptional regulator (RefSeq) insig. 36 75
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS23315 sigma-54-dependent Fis family transcriptional regulator strong 34 86
  Ralstonia solanacearum UW163 UW163_RS16565 sigma-54-dependent Fis family transcriptional regulator strong 34 86
  Enterobacter asburiae PDN3 EX28DRAFT_4350 nitrogen regulation protein NR(I) insig. 34 86
  Acinetobacter baumannii LAC-4 RR41_RS08030 nitrogen regulation protein NR(I) insig. 33 86
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1363 PEP-CTERM-box response regulator transcription factor strong 39 72
  Desulfovibrio vulgaris Hildenborough JW710 DVU2114 atoC sigma-54 dependent transcriptional regulator/response regulator (TIGR) insig. 40 69
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5269 Nitrogen regulation protein NR(I) insig. 39 72
  Sphingobium sp. HT1-2 GFF1148 Nitrogen regulation protein NR(I), GlnG (=NtrC) strong 38 67