Homologs of PS417_00110 from Pseudomonas simiae WCS417

tRNA threonylcarbamoyladenosine biosynthesis protein RimN
SEED: TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA
KEGG: putative translation factor

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas simiae WCS417 PS417_00110 tRNA threonylcarbamoyladenosine biosynthesis protein RimN no data 100 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_00228 Threonylcarbamoyl-AMP synthase no data 99 100
o Pseudomonas fluorescens SBW25 PFLU_RS00105 tRNA threonylcarbamoyladenosine biosynthesis protein RimN no data 98 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS00105 tRNA threonylcarbamoyladenosine biosynthesis protein RimN no data 98 100
o Pseudomonas orientalis W4I3 QF045_RS03045 L-threonylcarbamoyladenylate synthase no data 95 100
o Pseudomonas sp. DMC3 GFF595 Threonylcarbamoyl-AMP synthase no data 90 99
o Pseudomonas sp. SVBP6 COO64_RS02235 L-threonylcarbamoyladenylate synthase no data 87 99
o Pseudomonas sp. RS175 PFR28_04658 Threonylcarbamoyl-AMP synthase no data 88 99
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4126 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA no data 88 99
o Pseudomonas fluorescens FW300-N2C3 AO356_11300 tRNA threonylcarbamoyladenosine biosynthesis protein RimN no data 88 99
o Pseudomonas fluorescens FW300-N2E3 AO353_10655 tRNA threonylcarbamoyladenosine biosynthesis protein RimN no data 85 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1909 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA no data 86 99
o Pseudomonas putida KT2440 PP_0070 Threonylcarbamoyl-AMP synthase no data 85 99
o Pseudomonas fluorescens GW456-L13 PfGW456L13_647 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA no data 85 99
o Pseudomonas sp. BP01 JOY50_RS08230 L-threonylcarbamoyladenylate synthase no data 84 100
o Pseudomonas syringae pv. syringae B728a Psyr_0022 translation factor SUA5 no data 81 99
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0022 translation factor SUA5 no data 81 99
o Pseudomonas sp. S08-1 OH686_12500 Threonylcarbamoyl-AMP synthase no data 77 100
o Pseudomonas segetis P6 ACVTMO_RS01370 L-threonylcarbamoyladenylate synthase no data 75 100
o Pseudomonas aeruginosa MRSN321 DY961_RS26310 Sua5/YciO/YrdC/YwlC family protein no data 73 100
o Pseudomonas aeruginosa PA14 IKLFDK_25450 Threonylcarbamoyl-AMP synthase no data 73 100
o Pseudomonas aeruginosa PUPa3 DQ20_RS58715 Sua5/YciO/YrdC/YwlC family protein no data 73 100
o Pseudomonas stutzeri RCH2 Psest_0026 Putative translation factor (SUA5) no data 72 100
o Marinobacter adhaerens HP15 HP15_3747 Sua5/YciO/YrdC/YwlC family protein sig. 49 97
o Erwinia tracheiphila SCR3 LU632_RS22450 tsaC L-threonylcarbamoyladenylate synthase type 1 TsaC no data 52 92
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_12500 tsaC L-threonylcarbamoyladenylate synthase type 1 TsaC no data 52 92
o Pectobacterium carotovorum WPP14 HER17_RS02245 L-threonylcarbamoyladenylate synthase type 1 TsaC no data 51 93
o Lysobacter sp. OAE881 ABIE51_RS02215 Sua5/YciO/YrdC/YwlC family protein no data 49 95
o Dickeya dadantii 3937 DDA3937_RS19105 L-threonylcarbamoyladenylate synthase type 1 TsaC no data 49 93
o Rahnella sp. WP5 EX31_RS15955 L-threonylcarbamoyladenylate synthase type 1 TsaC no data 51 89
o Dickeya dianthicola 67-19 HGI48_RS19195 L-threonylcarbamoyladenylate synthase type 1 TsaC no data 46 98
o Dickeya dianthicola ME23 DZA65_RS20320 L-threonylcarbamoyladenylate synthase type 1 TsaC no data 46 98
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4753.1 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA no data 49 90
o Acinetobacter baumannii LAC-4 RR41_RS18090 threonylcarbamoyl-AMP synthase no data 44 96
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS13860 Sua5/YciO/YrdC/YwlC family protein no data 43 95
o Rhodanobacter sp. FW510-T8 OKGIIK_13760 Threonylcarbamoyl-AMP synthase no data 41 99
o Erwinia amylovora T8 OLJFJH_03690 L-threonylcarbamoyladenylate synthase type 1 TsaC no data 49 95
o Klebsiella michiganensis M5al BWI76_RS25650 L-threonylcarbamoyladenylate synthase type 1 TsaC no data 49 89
o Klebsiella pneumoniae MKP103 KDGMDA_06520 L-threonylcarbamoyladenylate synthase type 1 TsaC no data 49 89
o Alteromonas macleodii MIT1002 MIT1002_00025 t(6)A37 threonylcarbamoyladenosine biosynthesis protein RimN no data 47 92
o Enterobacter asburiae PDN3 EX28DRAFT_0045 Putative translation factor (SUA5) no data 51 89
o Rhodanobacter denitrificans MT42 LRK55_RS09795 Sua5/YciO/YrdC/YwlC family protein no data 42 90
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS10155 Sua5/YciO/YrdC/YwlC family protein no data 42 90
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS02935 Sua5/YciO/YrdC/YwlC family protein no data 41 99
o Escherichia coli BL21 ECD_03133 tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein, threonine-dependent ADP-forming ATPase no data 51 89
o Escherichia coli ECRC100 OKFHMN_17560 tsaC L-threonylcarbamoyladenylate synthase type 1 TsaC no data 51 89
o Escherichia coli ECRC101 MCAODC_08080 tsaC L-threonylcarbamoyladenylate synthase type 1 TsaC no data 51 89
o Escherichia coli ECRC102 NIAGMN_15320 tsaC L-threonylcarbamoyladenylate synthase type 1 TsaC no data 51 89
o Escherichia coli ECRC62 BNILDI_02170 tsaC L-threonylcarbamoyladenylate synthase type 1 TsaC no data 51 89
o Escherichia coli ECRC98 JDDGAC_21180 tsaC L-threonylcarbamoyladenylate synthase type 1 TsaC no data 51 89
o Escherichia coli ECRC99 KEDOAH_10590 tsaC L-threonylcarbamoyladenylate synthase type 1 TsaC no data 51 89
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00421 Threonylcarbamoyl-AMP synthase no data 51 89
o Escherichia coli BW25113 b3282 yrdC predicted ribosome maturation factor (NCBI) no data 51 89
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2396 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA no data 51 89
o Enterobacter sp. TBS_079 MPMX20_04190 Threonylcarbamoyl-AMP synthase no data 49 89
o Escherichia fergusonii Becca EFB2_00541 Threonylcarbamoyl-AMP synthase no data 51 89
o Escherichia coli ECOR27 NOLOHH_09350 tsaC L-threonylcarbamoyladenylate synthase type 1 TsaC no data 51 89
o Escherichia coli ECOR38 HEPCGN_16380 tsaC L-threonylcarbamoyladenylate synthase type 1 TsaC no data 51 89
o Escherichia coli Nissle 1917 ECOLIN_RS18845 L-threonylcarbamoyladenylate synthase type 1 TsaC no data 51 89
o Vibrio cholerae E7946 ATCC 55056 CSW01_00270 threonylcarbamoyl-AMP synthase insig. 45 92
o Serratia liquefaciens MT49 IAI46_23245 L-threonylcarbamoyladenylate synthase type 1 TsaC no data 48 89
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS22555 L-threonylcarbamoyladenylate synthase type 1 TsaC no data 50 95
o Acinetobacter radioresistens SK82 MPMX26_00113 Threonylcarbamoyl-AMP synthase no data 42 96
o Pantoea sp. MT58 IAI47_02310 L-threonylcarbamoyladenylate synthase type 1 TsaC no data 50 90
o Shewanella sp. ANA-3 Shewana3_0040 translation factor SUA5 (RefSeq) no data 44 90
o Shewanella loihica PV-4 Shew_3730 Sua5/YciO/YrdC/YwlC family protein (RefSeq) no data 43 90
o Shewanella oneidensis MR-1 SO0037 Sua5/YciO/YrdC/YwlC family protein (NCBI ptt file) no data 43 90
o Kangiella aquimarina DSM 16071 B158DRAFT_0403 Putative translation factor (SUA5) cofit 39 98
o Shewanella amazonensis SB2B Sama_0049 SUA5/YciO/YrdC-like protein (RefSeq) insig. 40 92
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS07710 L-threonylcarbamoyladenylate synthase no data 32 83
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0338 Sua5/YciO/YrdC/YwlC family protein no data 34 81
o Bacteroides ovatus ATCC 8483 BACOVA_01200 Sua5/YciO/YrdC/YwlC family protein no data 33 90
o Bacteroides stercoris CC31F HMPREF1181_RS06520 threonylcarbamoyl-AMP synthase no data 31 92
o Bacteroides thetaiotaomicron VPI-5482 BT3943 conserved hypothetical protein, putative translation factor (NCBI ptt file) no data 32 90
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_11045 threonylcarbamoyl-AMP synthase no data 31 81
  Desulfovibrio vulgaris Miyazaki F DvMF_0844 Sua5/YciO/YrdC/YwlC family protein (RefSeq) no data 33 82
  Rhodospirillum rubrum S1H Rru_A0444 Sua5/YciO/YrdC/YwlC (NCBI) no data 35 92
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS12205 threonylcarbamoyl-AMP synthase no data 30 88
  Ralstonia solanacearum UW163 UW163_RS01405 threonylcarbamoyl-AMP synthase no data 30 88
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS02975 threonylcarbamoyl-AMP synthase no data 32 90
  Ralstonia solanacearum PSI07 RPSI07_RS21125 threonylcarbamoyl-AMP synthase no data 31 88
  Ralstonia solanacearum GMI1000 RS_RS02890 threonylcarbamoyl-AMP synthase no data 32 85
  Ralstonia sp. UNC404CL21Col ABZR87_RS08095 L-threonylcarbamoyladenylate synthase no data 30 88
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS17455 L-threonylcarbamoyladenylate synthase no data 30 79
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS07740 threonylcarbamoyl-AMP synthase no data 30 91
  Rhodopseudomonas palustris CGA009 TX73_005535 L-threonylcarbamoyladenylate synthase no data 34 81
  Cupriavidus basilensis FW507-4G11 RR42_RS03235 translation factor Sua5 no data 31 81
o Fusobacterium nucleatum SB010 HUW76_09910 threonylcarbamoyl-AMP synthase no data 25 95
  Dechlorosoma suillum PS Dsui_0090 Sua5/YciO/YrdC/YwlC family protein no data 33 90
  Marinobacter adhaerens HP15 HP15_4108 translation factor, SUA5 type insig. 30 95
  Paraburkholderia graminis OAS925 ABIE53_003422 L-threonylcarbamoyladenylate synthase no data 29 88
  Castellaniella sp019104865 MT123 ABCV34_RS00570 L-threonylcarbamoyladenylate synthase no data 30 69
o Phocaeicola dorei CL03T12C01 ABI39_RS00255 threonylcarbamoyl-AMP synthase no data 30 94
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_02115 threonylcarbamoyl-AMP synthase sig. 29 96
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04184 translation factor SUA5 no data 29 88
  Shewanella amazonensis SB2B Sama_2993 SUA5/YciO/YrdC family translation initiation protein (RefSeq) sig. 34 79
  Kangiella aquimarina DSM 16071 B158DRAFT_0578 translation factor SUA5 insig. 31 81
  Variovorax sp. OAS795 ABID97_RS01695 L-threonylcarbamoyladenylate synthase no data 34 85
  Desulfovibrio vulgaris Hildenborough JW710 DVU1255 Sua5/YciO/YrdC/YwlC family protein (TIGR) cofit 32 73
  Methanococcus maripaludis S2 MMP_RS01035 threonylcarbamoyl-AMP synthase no data 27 97