Homologs of ECD_03124 from Escherichia coli BL21

multidrug efflux system protein
SEED: RND efflux system, inner membrane transporter CmeB
KEGG: hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Escherichia coli BL21 ECD_03124 multidrug efflux system protein insig. 100 100
o Escherichia coli ECOR27 NOLOHH_09440 acrF multidrug efflux RND transporter permease subunit AcrF cofit 100 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00439 Multidrug export protein AcrF insig. 100 100
o Escherichia coli ECRC62 BNILDI_02080 acrF multidrug efflux RND transporter permease subunit AcrF insig. 100 100
o Escherichia coli BW25113 b3266 acrF multidrug efflux system protein (NCBI) insig. 100 100
o Escherichia coli Nissle 1917 ECOLIN_RS18755 multidrug efflux RND transporter permease subunit AcrF insig. 99 100
o Escherichia fergusonii Becca EFB2_00558 Multidrug export protein AcrF insig. 99 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2116 RND efflux system, inner membrane transporter CmeB insig. 89 100
o Klebsiella michiganensis M5al BWI76_RS25585 multidrug efflux RND transporter permease subunit insig. 86 98
o Enterobacter sp. TBS_079 MPMX20_04175 Multidrug export protein AcrF insig. 84 98
o Enterobacter asburiae PDN3 EX28DRAFT_3319 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family insig. 84 98
  Rahnella sp. WP5 EX31_RS22470 multidrug efflux RND transporter permease subunit cofit 79 98
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4379 RND efflux system, inner membrane transporter CmeB sig. 78 98
  Enterobacter sp. TBS_079 MPMX20_01064 Multidrug efflux pump subunit AcrB strong 79 98
  Enterobacter asburiae PDN3 EX28DRAFT_2496 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family cofit 78 98
  Escherichia coli Nissle 1917 ECOLIN_RS02750 efflux RND transporter permease AcrB insig. 78 98
  Escherichia coli BL21 ECD_00413 multidrug efflux system protein strong 78 98
  Escherichia fergusonii Becca EFB2_03596 Multidrug efflux pump subunit AcrB insig. 78 98
  Escherichia coli ECOR27 NOLOHH_01140 acrB efflux RND transporter permease AcrB cofit 78 98
  Escherichia coli ECOR38 HEPCGN_06820 acrB efflux RND transporter permease AcrB strong 78 98
  Escherichia coli ECRC62 BNILDI_22555 acrB efflux RND transporter permease AcrB insig. 78 98
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03212 Multidrug efflux pump subunit AcrB cofit 78 98
  Escherichia coli BW25113 b0462 acrB multidrug efflux system protein (NCBI) strong 78 98
  Escherichia coli ECRC101 OKFHMN_08205 acrB efflux RND transporter permease AcrB insig. 78 98
  Escherichia coli ECRC101 MCAODC_27430 acrB efflux RND transporter permease AcrB insig. 78 98
  Escherichia coli ECRC102 NIAGMN_06260 acrB efflux RND transporter permease AcrB insig. 78 98
  Escherichia coli ECRC99 KEDOAH_19760 acrB efflux RND transporter permease AcrB no data 78 98
  Klebsiella michiganensis M5al BWI76_RS06775 multidrug efflux RND transporter permease subunit strong 78 98
  Erwinia tracheiphila SCR3 LU632_RS18185 efflux RND transporter permease subunit no data 77 98
  Serratia liquefaciens MT49 IAI46_05185 multidrug efflux RND transporter permease subunit SdeY cofit 78 98
  Pectobacterium carotovorum WPP14 HER17_RS15740 multidrug efflux RND transporter permease subunit cofit 76 98
  Dickeya dadantii 3937 DDA3937_RS05735 multidrug efflux RND transporter permease subunit strong 75 99
  Pantoea sp. MT58 IAI47_14515 multidrug efflux RND transporter permease subunit cofit 75 98
  Dickeya dianthicola ME23 DZA65_RS06115 multidrug efflux RND transporter permease subunit strong 75 99
  Dickeya dianthicola 67-19 HGI48_RS05790 multidrug efflux RND transporter permease subunit cofit 75 99
  Escherichia coli Nissle 1917 ECOLIN_RS20105 multidrug efflux pump RND permease MdtF insig. 70 99
  Escherichia fergusonii Becca EFB2_00294 Multidrug resistance protein MdtF insig. 70 99
  Escherichia coli ECRC101 OKFHMN_16275 mdtF multidrug efflux pump RND permease MdtF insig. 70 99
  Escherichia coli ECRC101 MCAODC_06790 mdtF multidrug efflux pump RND permease MdtF insig. 70 99
  Escherichia coli ECRC102 NIAGMN_14040 mdtF multidrug efflux pump RND permease MdtF insig. 70 99
  Escherichia coli ECRC98 JDDGAC_19905 mdtF multidrug efflux pump RND permease MdtF no data 70 99
  Escherichia coli ECRC99 KEDOAH_11870 mdtF multidrug efflux pump RND permease MdtF no data 70 99
  Escherichia coli ECOR27 NOLOHH_08240 mdtF multidrug efflux pump RND permease MdtF cofit 70 99
  Escherichia coli ECRC62 BNILDI_03315 mdtF multidrug efflux pump RND permease MdtF insig. 70 99
  Escherichia coli ECOR38 HEPCGN_15180 mdtF multidrug efflux pump RND permease MdtF cofit 70 99
  Escherichia coli BL21 ECD_03362 anaerobic multidrug efflux transporter, ArcA-regulated insig. 70 99
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00188 Multidrug resistance protein MdtF insig. 70 99
  Escherichia coli BW25113 b3514 mdtF multidrug transporter, RpoS-dependent (NCBI) insig. 70 99
  Escherichia coli ECOR38 HEPCGN_16470 acrF multidrug efflux RND transporter permease subunit AcrF cofit 100 69
  Azospirillum brasilense Sp245 AZOBR_RS30185 multidrug transporter insig. 67 100
  Azospirillum sp. SherDot2 MPMX19_05884 Multidrug efflux pump subunit AcrB insig. 67 100
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04170 multidrug efflux pump strong 65 100
  Paraburkholderia sabiae LMG 24235 QEN71_RS02525 efflux RND transporter permease subunit strong 65 100
  Desulfovibrio vulgaris Hildenborough JW710 DVU2816 multidrug resistance protein (TIGR) sig. 64 100
  Burkholderia phytofirmans PsJN BPHYT_RS16170 multidrug efflux RND transporter permease subunit no data 65 100
  Paraburkholderia graminis OAS925 ABIE53_003408 multidrug efflux pump strong 65 100
  Pseudomonas sp. S08-1 OH686_16050 Multidrug efflux system, inner membrane proton/drug antiporter (RND type) cofit 65 100
  Pseudomonas putida KT2440 PP_1385 Probable efflux pump membrane transporter TtgB strong 65 100
  Pseudomonas simiae WCS417 PS417_06770 multidrug transporter strong 64 99
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2824 RND efflux system, inner membrane transporter CmeB strong 65 99
  Paraburkholderia sabiae LMG 24235 QEN71_RS29865 efflux RND transporter permease subunit insig. 65 100
  Pseudomonas syringae pv. syringae B728a Psyr_4008 Hydrophobe/amphiphile efflux-1 HAE1 strong 65 100
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4008 Hydrophobe/amphiphile efflux-1 HAE1 no data 65 100
  Caulobacter crescentus NA1000 CCNA_00850 cation/multidrug efflux pump acrB2 strong 66 100
  Caulobacter crescentus NA1000 Δfur CCNA_00850 cation/multidrug efflux pump acrB2 cofit 66 100
  Pseudomonas fluorescens FW300-N2E3 AO353_17295 multidrug transporter strong 65 99
  Pseudomonas fluorescens FW300-N2C3 AO356_04880 multidrug transporter strong 65 99
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3246 RND efflux system, inner membrane transporter CmeB strong 65 99
  Pseudomonas sp. RS175 PFR28_00631 putative efflux pump membrane transporter TtgB strong 65 99
  Serratia liquefaciens MT49 IAI46_18690 multidrug efflux RND transporter permease AcrD insig. 64 100
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4581 RND efflux system, inner membrane transporter CmeB strong 64 99
  Cupriavidus basilensis FW507-4G11 RR42_RS32420 multidrug efflux RND transporter permease subunit insig. 64 100
  Rhodospirillum rubrum S1H Rru_A2051 Hydrophobe/amphiphile efflux-1 HAE1 (NCBI) cofit 65 100
  Ralstonia solanacearum PSI07 RPSI07_RS03390 multidrug efflux RND transporter permease subunit insig. 64 100
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS19795 multidrug efflux RND transporter permease subunit insig. 64 100
  Ralstonia solanacearum UW163 UW163_RS19380 multidrug efflux RND transporter permease subunit insig. 64 100
  Ralstonia solanacearum GMI1000 RS_RS21030 multidrug efflux RND transporter permease subunit insig. 65 100
  Shewanella sp. ANA-3 Shewana3_4045 hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) strong 64 100
  Shewanella oneidensis MR-1 SO4692 AcrB/AcrD/AcrF family protein (NCBI ptt file) strong 64 100
  Shewanella amazonensis SB2B Sama_3554 AcrB/AcrD/AcrF family protein (RefSeq) strong 63 100
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1794.1 RND efflux system, inner membrane transporter CmeB insig. 64 100
  Pseudomonas fluorescens SBW25 PFLU_RS06805 efflux RND transporter permease subunit cofit 64 99
  Pseudomonas fluorescens SBW25-INTG PFLU_RS06805 efflux RND transporter permease subunit strong 64 99
  Pseudomonas stutzeri RCH2 Psest_0310 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family strong 63 100
  Herbaspirillum seropedicae SmR1 HSERO_RS06815 multidrug transporter insig. 64 100
  Escherichia fergusonii Becca EFB2_01418 Multidrug efflux pump subunit AcrB insig. 63 100
  Escherichia coli ECOR38 HEPCGN_21140 acrD multidrug efflux RND transporter permease AcrD cofit 63 100
  Escherichia coli ECRC62 BNILDI_12460 acrD multidrug efflux RND transporter permease AcrD insig. 63 100
  Escherichia coli BL21 ECD_02361 aminoglycoside/multidrug efflux system insig. 63 100
  Escherichia coli ECOR27 NOLOHH_13650 acrD multidrug efflux RND transporter permease AcrD insig. 63 100
  Escherichia coli BW25113 b2470 acrD aminoglycoside/multidrug efflux system (NCBI) strong 63 100
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS18285 efflux RND transporter permease subunit insig. 64 100
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2188 RND efflux system, inner membrane transporter CmeB cofit 63 100
  Escherichia coli Nissle 1917 ECOLIN_RS14090 multidrug efflux RND transporter permease AcrD insig. 63 100
o Bosea sp. OAE506 ABIE41_RS01595 efflux RND transporter permease subunit insig. 64 100
  Escherichia coli ECRC101 OKFHMN_21970 acrD multidrug efflux RND transporter permease AcrD insig. 63 100
  Escherichia coli ECRC101 MCAODC_12500 acrD multidrug efflux RND transporter permease AcrD insig. 63 100
  Escherichia coli ECRC102 NIAGMN_19740 acrD multidrug efflux RND transporter permease AcrD insig. 63 100
  Escherichia coli ECRC98 JDDGAC_25915 acrD multidrug efflux RND transporter permease AcrD no data 63 100
  Escherichia coli ECRC99 KEDOAH_06250 acrD multidrug efflux RND transporter permease AcrD no data 63 100