| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_19070 | | LysR family transcriptional regulator | insig. | 100 | 100 |
| o | Enterobacter sp. TBS_079 | MPMX20_02165 | | HTH-type transcriptional regulator DmlR | insig. | 40 | 97 |
| o | Enterobacter asburiae PDN3 | EX28DRAFT_1387 | | Transcriptional regulator | cofit | 39 | 97 |
| o | Rhizobium sp. OAE497 | ABIE40_RS03550 | | LysR family transcriptional regulator | strong | 40 | 97 |
| o | Paraburkholderia graminis OAS925 | ABIE53_000975 | | LysR family transcriptional activator of dmlA | insig. | 38 | 97 |
| | Paraburkholderia graminis OAS925 | ABIE53_002538 | | DNA-binding transcriptional LysR family regulator | sig. | 38 | 96 |
| o | Paraburkholderia sabiae LMG 24235 | QEN71_RS06260 | | LysR family transcriptional regulator | insig. | 38 | 96 |
| o | Burkholderia phytofirmans PsJN | BPHYT_RS13530 | | LysR family transcriptional regulator | no data | 37 | 97 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS16530 | | LysR family transcriptional regulator | insig. | 39 | 98 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS12295 | | LysR family transcriptional regulator | sig. | 37 | 96 |
| o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_04237 | | transcriptional regulator, LysR family | insig. | 40 | 98 |
| o | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS18110 | | LysR family transcriptional regulator | insig. | 39 | 96 |
| o | Bosea sp. OAE506 | ABIE41_RS22155 | | LysR family transcriptional regulator | insig. | 38 | 97 |
| o | Dechlorosoma suillum PS | Dsui_0016 | | transcriptional regulator | strong | 40 | 96 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00578 | | transcriptional regulator, LysR family | insig. | 37 | 96 |
| o | Herbaspirillum seropedicae SmR1 | HSERO_RS15205 | | LysR family transcriptional regulator | insig. | 38 | 96 |
| o | Cupriavidus basilensis FW507-4G11 | RR42_RS01520 | | LysR family transcriptional regulator | insig. | 38 | 98 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS10025 | | LysR family transcriptional regulator | insig. | 39 | 98 |
| | Paraburkholderia graminis OAS925 | ABIE53_003477 | | DNA-binding transcriptional LysR family regulator | insig. | 39 | 98 |
| o | Pseudomonas sp. BP01 | JOY50_RS26935 | | LysR substrate-binding domain-containing protein | insig. | 37 | 99 |
| o | Sinorhizobium meliloti 1021 | SMc00831 | | transcriptional regulator | insig. | 38 | 96 |
| | Rhizobium sp. OAE497 | ABIE40_RS06595 | | LysR family transcriptional regulator | insig. | 38 | 96 |
| o | Agrobacterium fabrum C58 | Atu0664 | | transcriptional regulator, LysR family | strong | 37 | 96 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS33760 | | hypothetical protein | insig. | 35 | 97 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_25010 | | LysR family transcriptional regulator | insig. | 38 | 98 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS02200 | | LysR family transcriptional regulator | insig. | 38 | 99 |
| o | Ralstonia sp. UNC404CL21Col | ABZR87_RS05530 | | LysR family transcriptional regulator | insig. | 40 | 96 |
| o | Azospirillum brasilense Sp245 | AZOBR_RS18640 | | LysR family transcriptional regulator | insig. | 38 | 95 |
| o | Ralstonia solanacearum PSI07 | RPSI07_RS15095 | | LysR family transcriptional regulator | insig. | 37 | 96 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS22135 | | LysR family transcriptional regulator | insig. | 40 | 95 |
| o | Acidovorax sp. GW101-3H11 | Ac3H11_715 | | Transcriptional regulator, LysR family, in glycolate utilization operon | sig. | 35 | 98 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS12185 | | LysR family transcriptional regulator | insig. | 38 | 96 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS10340 | | LysR family transcriptional regulator | insig. | 36 | 97 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS11615 | | LysR family transcriptional regulator | sig. | 37 | 96 |
| o | Azospirillum sp. SherDot2 | MPMX19_04441 | | HTH-type transcriptional regulator DmlR | insig. | 36 | 97 |
| | Dechlorosoma suillum PS | Dsui_1892 | | transcriptional regulator | insig. | 36 | 96 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00866 | | transcriptional regulator, LysR family | no data | 38 | 95 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS09225 | | LysR family transcriptional regulator | insig. | 39 | 95 |
| | Paraburkholderia graminis OAS925 | ABIE53_002082 | | DNA-binding transcriptional LysR family regulator | insig. | 38 | 95 |
| o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4411 | | Transcriptional regulator, LysR family | no data | 36 | 97 |
| o | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS00160 | | LysR family transcriptional regulator | no data | 38 | 96 |
| o | Ralstonia solanacearum UW163 | UW163_RS13490 | | LysR family transcriptional regulator | no data | 38 | 96 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2158 | | Transcriptional regulator, LysR family | insig. | 38 | 98 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS03275 | | LysR family transcriptional regulator | insig. | 38 | 98 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS03275 | | LysR family transcriptional regulator | insig. | 38 | 98 |
| | Sinorhizobium meliloti 1021 | SM_b21291 | | LysR family transcriptional regulator | insig. | 34 | 100 |
| o | Pseudomonas sp. RS175 | PFR28_02643 | | HTH-type transcriptional regulator DmlR | insig. | 37 | 97 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS17325 | | LysR family transcriptional regulator | insig. | 37 | 96 |
| o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_4454 | | Transcriptional regulator, LysR family | insig. | 38 | 98 |
| | Pseudomonas simiae WCS417 | PS417_09485 | | LysR family transcriptional regulator | insig. | 34 | 98 |
| o | Xanthobacter sp. DMC5 | GFF3690 | | HTH-type transcriptional regulator DmlR | insig. | 38 | 96 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_00854 | | HTH-type transcriptional regulator DmlR | cofit | 38 | 98 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS23170 | | LysR family transcriptional regulator | insig. | 36 | 97 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS19825 | | LysR family transcriptional regulator | insig. | 35 | 96 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_19415 | | LysR family transcriptional regulator | insig. | 36 | 98 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS03880 | | LysR family transcriptional regulator | insig. | 34 | 96 |
| o | Ralstonia solanacearum GMI1000 | RS_RS16435 | | LysR family transcriptional regulator | insig. | 33 | 96 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_01740 | | HTH-type transcriptional regulator DmlR | insig. | 37 | 98 |
| | Paraburkholderia graminis OAS925 | ABIE53_005151 | | LysR family transcriptional activator of dmlA | insig. | 35 | 96 |
| | Ralstonia solanacearum GMI1000 | RS_RS06820 | | LysR family transcriptional regulator | insig. | 37 | 96 |
| o | Pseudomonas orientalis W4I3 | QF045_RS10740 | | LysR family transcriptional regulator | insig. | 37 | 98 |
| | Agrobacterium fabrum C58 | Atu3951 | | LysR family transcriptional regulator | insig. | 43 | 83 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_18200 | | LysR family transcriptional regulator | insig. | 37 | 98 |
| o | Variovorax sp. SCN45 | GFF7171 | | Transcriptional regulator DmlR, LysR family | insig. | 36 | 95 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS08655 | | LysR family transcriptional regulator | sig. | 33 | 96 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS37825 | | LysR substrate-binding domain-containing protein | insig. | 34 | 95 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF3045 | | Transcriptional regulator, LysR family | insig. | 34 | 98 |
| | Pseudomonas simiae WCS417 | PS417_03195 | | LysR family transcriptional regulator | insig. | 38 | 98 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_06130 | | LysR family transcriptional regulator | insig. | 38 | 98 |
| o | Dickeya dadantii 3937 | DDA3937_RS04650 | | LysR family transcriptional regulator | insig. | 37 | 97 |
| | Azospirillum brasilense Sp245 | AZOBR_RS21915 | | LysR family transcriptional regulator | strong | 36 | 97 |
| | Azospirillum sp. SherDot2 | MPMX19_05002 | | HTH-type transcriptional regulator DmlR | insig. | 34 | 99 |
| | Pseudomonas orientalis W4I3 | QF045_RS06230 | | LysR family transcriptional regulator | insig. | 37 | 98 |
| o | Dickeya dianthicola 67-19 | HGI48_RS04610 | | LysR family transcriptional regulator | insig. | 37 | 97 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_259 | | Transcriptional regulator, LysR family | insig. | 36 | 97 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS07990 | | LysR family transcriptional regulator | insig. | 36 | 98 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS07990 | | LysR family transcriptional regulator | insig. | 36 | 98 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS04415 | | LysR family transcriptional regulator | insig. | 36 | 95 |
| | Rhodospirillum rubrum S1H | Rru_A2257 | | Transcriptional Regulator, LysR family (NCBI) | strong | 35 | 98 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS03985 | | LysR family transcriptional regulator | insig. | 35 | 97 |
| | Pseudomonas sp. DMC3 | GFF3363 | | HTH-type transcriptional regulator DmlR | cofit | 38 | 98 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS41975 | | LysR family transcriptional regulator | sig. | 36 | 98 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS15180 | | LysR family transcriptional regulator | insig. | 36 | 98 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS25045 | | LysR family transcriptional regulator | insig. | 34 | 97 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_21990 | | LysR family transcriptional regulator | insig. | 39 | 85 |
| | Pseudomonas sp. RS175 | PFR28_00753 | | HTH-type transcriptional regulator DmlR | insig. | 35 | 99 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_1256 | | Transcriptional regulator, LysR family | insig. | 37 | 98 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_18 | | Transcriptional regulator, LysR family | insig. | 37 | 98 |
| o | Dickeya dianthicola ME23 | DZA65_RS04530 | | LysR family transcriptional regulator | insig. | 37 | 97 |
| o | Lysobacter sp. OAE881 | ABIE51_RS06090 | | LysR family transcriptional regulator | insig. | 37 | 96 |
| | Shewanella loihica PV-4 | Shew_0506 | | LysR family transcriptional regulator (RefSeq) | insig. | 36 | 98 |
| | Paraburkholderia graminis OAS925 | ABIE53_002002 | | DNA-binding transcriptional LysR family regulator | strong | 35 | 97 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_3607 | | transcriptional regulator, LysR family | insig. | 37 | 97 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3607 | | transcriptional regulator, LysR family | insig. | 37 | 97 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF461 | | Transcriptional regulator, LysR family | insig. | 36 | 99 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS04600 | | LysR family transcriptional regulator | insig. | 36 | 98 |
| | Pseudomonas simiae WCS417 | PS417_08020 | | LysR family transcriptional regulator | insig. | 36 | 98 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02593 | | HTH-type transcriptional regulator DmlR | cofit | 36 | 98 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2674 | | Positive regulator of Tartrate dehydrogenase/decarboxylase/D-malic enzyme | insig. | 36 | 95 |
| | Pseudomonas sp. BP01 | JOY50_RS04745 | | LysR family transcriptional regulator | insig. | 35 | 97 |