Homologs of CCNA_03652 from Caulobacter crescentus NA1000 Δfur

ATP-dependent nuclease subunit A
SEED: FIG061771: ATP-dependent nuclease subunit A

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
o Caulobacter crescentus NA1000 CCNA_03652 ATP-dependent nuclease subunit A strong 100 100
  Caulobacter crescentus NA1000 Δfur CCNA_03652 ATP-dependent nuclease subunit A cofit 100 100
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS11290 double-strand break repair helicase AddA insig. 53 99
o Azospirillum sp. SherDot2 MPMX19_02722 ATP-dependent helicase/nuclease subunit A no data 40 100
o Agrobacterium fabrum C58 Atu0023 ATP-dependant DNA helicase no data 39 99
o Magnetospirillum magneticum AMB-1 AMB_RS21065 double-strand break repair helicase AddA no data 39 100
o Rhodospirillum rubrum S1H Rru_A3434 UvrD/REP helicase (NCBI) no data 40 99
o Rhodopseudomonas palustris CGA009 TX73_000385 double-strand break repair helicase AddA cofit 40 98
o Sinorhizobium meliloti 1021 SMc02760 ATP-dependent nuclease/helicase no data 39 100
o Rhizobium sp. OAE497 ABIE40_RS19360 double-strand break repair helicase AddA strong 38 100
o Dinoroseobacter shibae DFL-12 Dshi_3438 Double-strand break repair helicase AddA (RefSeq) no data 37 99
o Phaeobacter inhibens DSM 17395 PGA1_c35310 double strand break repair helicase AddA no data 36 99
o Bosea sp. OAE506 ABIE41_RS02725 double-strand break repair helicase AddA strong 38 98
  Sphingomonas koreensis DSMZ 15582 Ga0059261_4027 DNA helicase/exodeoxyribonuclease V, subunit A (EC 3.1.11.5) no data 37 69
o Ralstonia sp. UNC404CL21Col ABZR87_RS10785 exodeoxyribonuclease V subunit beta strong 29 98
o Ralstonia solanacearum PSI07 RPSI07_RS18225 ATP-dependent exonuclease no data 30 98
o Ralstonia solanacearum UW163 UW163_RS12615 ATP-dependent exonuclease no data 30 99
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS15145 ATP-dependent exonuclease no data 30 99
  Dechlorosoma suillum PS Dsui_3214 ATP-dependent exonuclase V beta subunit, helicase and exonuclease domain-containing no data 28 80
  Ralstonia solanacearum GMI1000 RS_RS05965 ATP-dependent exonuclease no data 31 76
o Variovorax sp. OAS795 ABID97_RS14665 UvrD-helicase domain-containing protein sig. 27 98
o Acidovorax sp. GW101-3H11 Ac3H11_469 UvrD/REP helicase no data 27 99
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4243 ATP-dependent DNA helicase pcrA (EC 3.6.1.-) strong 27 98
  Cupriavidus basilensis FW507-4G11 RR42_RS13295 ATP-dependent exonuclease no data 30 60
  Synechococcus elongatus PCC 7942 Synpcc7942_1157 hypothetical protein insig. 28 67
  Sphingomonas koreensis DSMZ 15582 Ga0059261_4027 DNA helicase/exodeoxyribonuclease V, subunit A (EC 3.1.11.5) no data 47 13
  Rhodopseudomonas palustris CGA009 TX73_011430 UvrD-helicase domain-containing protein cofit 30 46
  Variovorax sp. SCN45 GFF1106 UvrD/REP helicase insig. 28 42
  Pseudomonas stutzeri RCH2 Psest_0213 exodeoxyribonuclease V, beta subunit no data 27 78
  Pectobacterium carotovorum WPP14 HER17_RS16525 exodeoxyribonuclease V subunit beta strong 28 41
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5515 ATP-dependent DNA helicase pcrA (EC 3.6.1.-) insig. 24 76
  Shewanella loihica PV-4 Shew_2130 exodeoxyribonuclease V, beta subunit (RefSeq) no data 27 41
  Vibrio cholerae E7946 ATCC 55056 CSW01_11780 exodeoxyribonuclease V subunit beta strong 27 41
  Lysobacter sp. OAE881 ABIE51_RS01025 exodeoxyribonuclease V subunit beta strong 29 42
  Pantoea sp. MT58 IAI47_03965 exodeoxyribonuclease V subunit beta no data 26 45
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12980 ATP-dependent DNA helicase no data 23 48
  Variovorax sp. OAS795 ABID97_RS18290 UvrD-helicase domain-containing protein insig. 26 65
  Pseudomonas fluorescens GW456-L13 PfGW456L13_5151 Exodeoxyribonuclease V beta chain (EC 3.1.11.5) sig. 28 41
  Enterobacter sp. TBS_079 MPMX20_03683 RecBCD enzyme subunit RecB strong 27 46
  Castellaniella sp019104865 MT123 ABCV34_RS02965 exodeoxyribonuclease V subunit beta sig. 27 43
  Herbaspirillum seropedicae SmR1 HSERO_RS04330 ATP-dependent exonuclease strong 25 47
  Klebsiella michiganensis M5al BWI76_RS23230 exodeoxyribonuclease V subunit beta strong 26 57
  Enterobacter asburiae PDN3 EX28DRAFT_2895 DNA helicase/exodeoxyribonuclease V, beta subunit (EC 3.1.11.5) no data 27 46
  Synechococcus elongatus PCC 7942 Synpcc7942_2168 pcrA ATP-dependent DNA helicase, Rep family insig. 26 46
  Erwinia tracheiphila SCR3 LU632_RS06190 recB exodeoxyribonuclease V subunit beta no data 27 41
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS03305 UvrD-helicase domain-containing protein strong 23 50
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3460 Exodeoxyribonuclease V beta chain (EC 3.1.11.5) insig. 28 41
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS07840 ATP-dependent helicase no data 23 53
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1235 Exodeoxyribonuclease V beta chain (EC 3.1.11.5) sig. 28 41
  Pseudomonas putida KT2440 PP_4673 Chi activated ATP-dependent DNA helicase and dsDNA/ssDNA exonuclease no data 28 41
  Pseudomonas syringae pv. syringae B728a Psyr_0681 DNA helicase/exodeoxyribonuclease V, beta subunit no data 26 54
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0681 DNA helicase/exodeoxyribonuclease V, beta subunit no data 26 54
  Escherichia coli Nissle 1917 ECOLIN_RS15830 exodeoxyribonuclease V subunit beta no data 25 45
  Escherichia coli ECOR38 HEPCGN_19305 recB exodeoxyribonuclease V subunit beta cofit 25 45
  Pseudomonas fluorescens FW300-N2E3 AO353_06045 exodeoxyribonuclease V subunit beta strong 27 41
  Escherichia fergusonii Becca EFB2_01064 RecBCD enzyme subunit RecB strong 26 45
  Escherichia coli ECOR27 NOLOHH_11935 recB exodeoxyribonuclease V subunit beta no data 25 45
  Escherichia coli ECRC101 OKFHMN_20050 recB exodeoxyribonuclease V subunit beta no data 25 45
  Escherichia coli ECRC101 MCAODC_10575 recB exodeoxyribonuclease V subunit beta no data 25 45
  Escherichia coli ECRC102 NIAGMN_17820 recB exodeoxyribonuclease V subunit beta no data 25 45
  Escherichia coli ECRC98 JDDGAC_23715 recB exodeoxyribonuclease V subunit beta no data 25 45
  Escherichia coli ECRC99 KEDOAH_08080 recB exodeoxyribonuclease V subunit beta no data 25 45
  Escherichia coli BL21 ECD_02668 exonuclease V (RecBCD complex), beta subunit no data 25 45
  Escherichia coli ECRC62 BNILDI_10415 recB exodeoxyribonuclease V subunit beta no data 25 45
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00910 RecBCD enzyme subunit RecB no data 25 45
  Escherichia coli BW25113 b2820 recB exonuclease V (RecBCD complex), beta subunit (NCBI) strong 25 45
  Fusobacterium nucleatum SB010 HUW76_05850 UvrD-helicase domain-containing protein cofit 18 75
  Desulfovibrio vulgaris Hildenborough JW710 DVU2062 ATP-dependent DNA helicase, UvrD/REP family (TIGR) sig. 27 42
  Pseudomonas fluorescens FW300-N2C3 AO356_07915 exodeoxyribonuclease V subunit beta sig. 26 54
  Phocaeicola dorei CL03T12C01 ABI39_RS17735 UvrD-helicase domain-containing protein no data 23 50
  Shewanella sp. ANA-3 Shewana3_2246 exodeoxyribonuclease V, beta subunit (RefSeq) no data 26 42
  Shewanella amazonensis SB2B Sama_1901 exodeoxyribonuclease V, beta subunit (RefSeq) no data 27 41
  Variovorax sp. SCN45 GFF1106 UvrD/REP helicase insig. 30 26
  Rahnella sp. WP5 EX31_RS20735 exodeoxyribonuclease V subunit beta strong 26 45
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS04805 UvrD-helicase domain-containing protein strong 24 42
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1301 Exodeoxyribonuclease V beta chain (EC 3.1.11.5) no data 25 46
  Pseudomonas simiae WCS417 PS417_23775 exodeoxyribonuclease V subunit beta strong 27 41
  Bifidobacterium breve UCC2003 BBR_RS14985 ATP-dependent DNA helicase PcrA strong 26 45
  Bacteroides stercoris CC31F HMPREF1181_RS16505 UvrD-helicase domain-containing protein insig. 22 49
  Pseudomonas fluorescens SBW25 PFLU_RS25590 exodeoxyribonuclease V subunit beta strong 27 41
  Pseudomonas fluorescens SBW25-INTG PFLU_RS25590 exodeoxyribonuclease V subunit beta no data 27 41
  Kangiella aquimarina DSM 16071 B158DRAFT_2168 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) strong 28 26
  Bacteroides thetaiotaomicron VPI-5482 BT0657 ATP-dependent DNA helicase (NCBI ptt file) no data 24 43
  Bacteroides stercoris CC31F HMPREF1181_RS15235 UvrD-helicase domain-containing protein cofit 22 75
  Dickeya dianthicola 67-19 HGI48_RS11100 exodeoxyribonuclease V subunit beta no data 26 48
  Pseudomonas sp. S08-1 OH686_12075 Exodeoxyribonuclease V beta chain cofit 27 45
  Paraburkholderia graminis OAS925 ABIE53_000495 exodeoxyribonuclease V beta subunit insig. 28 41
  Caulobacter crescentus NA1000 CCNA_01596 DNA helicase II strong 25 52
  Caulobacter crescentus NA1000 Δfur CCNA_01596 DNA helicase II cofit 25 52
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS03535 UvrD-helicase domain-containing protein cofit 24 42
  Bacteroides ovatus ATCC 8483 BACOVA_02365 UvrD/REP helicase no data 24 43
  Desulfovibrio vulgaris Miyazaki F DvMF_0764 UvrD/REP helicase (RefSeq) insig. 24 75
  Phocaeicola dorei CL03T12C01 ABI39_RS17615 UvrD-helicase domain-containing protein no data 24 42
  Serratia liquefaciens MT49 IAI46_20405 exodeoxyribonuclease V subunit beta no data 26 41
  Dickeya dianthicola ME23 DZA65_RS11480 exodeoxyribonuclease V subunit beta no data 27 46
  Rhodopseudomonas palustris CGA009 TX73_011430 UvrD-helicase domain-containing protein cofit 34 11
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_07795 ATP-dependent DNA helicase no data 21 53
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.5266.1 ATP-dependent DNA helicase Rep no data 25 46
  Rhodopseudomonas palustris CGA009 TX73_014510 ATP-dependent helicase insig. 32 15
  Rhodospirillum rubrum S1H Rru_A1536 UvrD/REP helicase (NCBI) strong 27 45