Homologs of CA265_RS23925 from Pedobacter sp. GW460-11-11-14-LB5

endonuclease
SEED: FIG00907143: hypothetical protein
KEGG: putative endonuclease

87 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS23925 endonuclease insig. 100 100
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS16055 YraN family protein insig. 54 99
o Bacteroides ovatus ATCC 8483 BACOVA_03109 hypothetical protein insig. 44 98
o Bacteroides thetaiotaomicron VPI-5482 BT2236 conserved hypothetical protein (NCBI ptt file) insig. 43 98
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_16405 YraN family protein insig. 43 97
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0673 Predicted endonuclease distantly related to archaeal Holliday junction resolvase insig. 43 98
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS13900 YraN family protein sig. 42 98
o Phocaeicola dorei CL03T12C01 ABI39_RS09505 YraN family protein insig. 41 98
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS04775 YraN family protein insig. 38 98
o Bacteroides stercoris CC31F HMPREF1181_RS09395 YraN family protein insig. 36 98
o Pseudomonas stutzeri RCH2 Psest_3272 TIGR00252 family protein insig. 33 97
  Desulfovibrio vulgaris Miyazaki F DvMF_2881 protein of unknown function UPF0102 (RefSeq) insig. 30 92
o Bifidobacterium breve UCC2003 BBR_RS14575 YraN family protein insig. 36 91
o Pseudomonas fluorescens SBW25 PFLU_RS04645 YraN family protein insig. 31 91
o Pseudomonas fluorescens SBW25-INTG PFLU_RS04645 YraN family protein insig. 31 91
o Acinetobacter radioresistens SK82 MPMX26_02280 hypothetical protein no data 31 97
o Pseudomonas simiae WCS417 PS417_04580 hypothetical protein insig. 31 91
o Pseudomonas syringae pv. syringae B728a Psyr_4114 Protein of unknown function UPF0102 insig. 32 91
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4114 Protein of unknown function UPF0102 insig. 32 91
o Desulfovibrio vulgaris Hildenborough JW710 DVU0833 conserved hypothetical protein TIGR00252 (TIGR) insig. 30 91
o Pseudomonas putida KT2440 PP_1324 putative endonuclease distantly related to archaeal Holliday junction resolvase sig. 29 91
o Shewanella oneidensis MR-1 SO0299 conserved hypothetical protein TIGR00252 (NCBI ptt file) insig. 35 81
  Vibrio cholerae E7946 ATCC 55056 CSW01_03080 YraN family protein insig. 34 77
o Shewanella amazonensis SB2B Sama_3355 hypothetical protein (RefSeq) insig. 33 91
o Kangiella aquimarina DSM 16071 B158DRAFT_2107 TIGR00252 family protein sig. 30 81
  Shewanella sp. ANA-3 Shewana3_3881 hypothetical protein (RefSeq) cofit 34 78
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1641 Predicted endonuclease distantly related to archaeal Holliday junction resolvase sig. 30 91
o Shewanella loihica PV-4 Shew_0226 hypothetical protein (RefSeq) insig. 32 82
  Fusobacterium nucleatum SB010 HUW76_08565 YraN family protein strong 33 79
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_955 Predicted endonuclease distantly related to archaeal Holliday junction resolvase no data 28 91
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5344 Predicted endonuclease distantly related to archaeal Holliday junction resolvase sig. 28 91
o Pseudomonas sp. RS175 PFR28_03599 hypothetical protein insig. 26 91
  Acidovorax sp. GW101-3H11 Ac3H11_4467 Predicted endonuclease distantly related to archaeal Holliday junction resolvase insig. 29 79
o Pseudomonas fluorescens FW300-N2C3 AO356_17100 hypothetical protein insig. 27 91
  Castellaniella sp019104865 MT123 ABCV34_RS14315 YraN family protein insig. 25 91
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS08490 YraN family protein insig. 31 93
  Ralstonia solanacearum UW163 UW163_RS05120 YraN family protein insig. 31 93
o Marinobacter adhaerens HP15 HP15_551 hypothetical protein cofit 28 92
  Serratia liquefaciens MT49 IAI46_22305 YraN family protein insig. 35 85
  Ralstonia sp. UNC404CL21Col ABZR87_RS03810 YraN family protein insig. 34 77
  Synechococcus elongatus PCC 7942 Synpcc7942_0312 hypothetical protein insig. 25 83
  Ralstonia solanacearum PSI07 RPSI07_RS08735 YraN family protein insig. 33 77
  Dickeya dianthicola ME23 DZA65_RS01675 YraN family protein insig. 30 80
  Herbaspirillum seropedicae SmR1 HSERO_RS23355 hypothetical protein no data 30 77
  Pectobacterium carotovorum WPP14 HER17_RS19870 YraN family protein insig. 34 74
o Cupriavidus basilensis FW507-4G11 RR42_RS19735 hypothetical protein insig. 32 97
  Escherichia coli ECOR38 HEPCGN_17100 yraN YraN family protein cofit 32 91
  Dickeya dadantii 3937 DDA3937_RS01705 YraN family protein insig. 30 80
  Enterobacter asburiae PDN3 EX28DRAFT_3197 TIGR00252 family protein insig. 35 72
  Escherichia coli ECRC62 BNILDI_01505 yraN YraN family protein insig. 32 91
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS12180 YraN family protein insig. 30 76
  Escherichia coli ECOR27 NOLOHH_10025 yraN YraN family protein cofit 33 85
  Dechlorosoma suillum PS Dsui_0252 TIGR00252 family protein cofit 31 75
  Dickeya dianthicola 67-19 HGI48_RS01600 YraN family protein insig. 30 78
  Rhodanobacter denitrificans MT42 LRK55_RS11915 YraN family protein insig. 30 76
  Ralstonia solanacearum GMI1000 RS_RS16355 YraN family protein insig. 32 88
  Klebsiella michiganensis M5al BWI76_RS24920 YraN family protein insig. 31 72
  Escherichia coli BL21 ECD_03015 UPF0102 family protein sig. 31 91
  Escherichia fergusonii Becca EFB2_00675 hypothetical protein insig. 31 91
  Escherichia coli Nissle 1917 ECOLIN_RS18095 YraN family protein insig. 31 91
  Escherichia coli BW25113 b3148 yraN hypothetical protein (NCBI) insig. 31 91
  Erwinia tracheiphila SCR3 LU632_RS02220 YraN family protein insig. 31 78
  Rhodanobacter sp. FW510-T8 OKGIIK_11745 yraN YraN family protein insig. 31 76
  Rahnella sp. WP5 EX31_RS12540 YraN family protein insig. 30 92
  Enterobacter sp. TBS_079 MPMX20_04052 hypothetical protein insig. 34 72
  Rhodopseudomonas palustris CGA009 TX73_001675 YraN family protein insig. 30 96
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1519 Predicted endonuclease distantly related to archaeal Holliday junction resolvase insig. 31 78
  Mycobacterium tuberculosis H37Rv Rv2898c Conserved hypothetical protein insig. 27 89
  Escherichia coli ECRC101 OKFHMN_18225 yraN YraN family protein insig. 31 85
  Escherichia coli ECRC101 MCAODC_08745 yraN YraN family protein insig. 31 85
  Escherichia coli ECRC102 NIAGMN_15985 yraN YraN family protein insig. 31 85
  Escherichia coli ECRC98 JDDGAC_21850 yraN YraN family protein no data 31 85
  Escherichia coli ECRC99 KEDOAH_09925 yraN YraN family protein no data 31 85
  Variovorax sp. SCN45 GFF3736 UPF0102 protein YraN insig. 30 77
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2756 Predicted endonuclease distantly related to archaeal Holliday junction resolvase insig. 42 44
  Dinoroseobacter shibae DFL-12 Dshi_2830 protein of unknown function UPF0102 (RefSeq) insig. 31 66
  Variovorax sp. OAS795 ABID97_RS00280 YraN family protein insig. 29 77
  Alteromonas macleodii MIT1002 MIT1002_03115 hypothetical protein insig. 32 77
  Agrobacterium fabrum C58 Atu0303 hypothetical protein insig. 30 91
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2716 Predicted endonuclease distantly related to archaeal Holliday junction resolvase no data 35 55
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS11390 YraN family protein insig. 29 73
  Caulobacter crescentus NA1000 CCNA_00142 endonuclease strong 28 71
  Caulobacter crescentus NA1000 Δfur CCNA_00142 endonuclease cofit 28 71
  Phaeobacter inhibens DSM 17395 PGA1_c26720 Predicted endonuclease distantly related to archaeal Holliday junction resolvase insig. 47 36
  Magnetospirillum magneticum AMB-1 AMB_RS22785 YraN family protein no data 39 43
  Lysobacter sp. OAE881 ABIE51_RS04685 YraN family protein insig. 29 86
  Rhizobium sp. OAE497 ABIE40_RS01375 YraN family protein insig. 32 77