Homologs of Atu0701 from Agrobacterium fabrum C58

GGDEF family protein
SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Agrobacterium fabrum C58 Atu0701 GGDEF family protein sig. 100 100
o Rhizobium sp. OAE497 ABIE40_RS05245 EAL domain-containing protein insig. 82 98
o Sinorhizobium meliloti 1021 SMc00887 hypothetical protein insig. 74 94
  Caulobacter crescentus NA1000 CCNA_03191 PAS-family GGDEF/EAL family protein cofit 39 97
  Caulobacter crescentus NA1000 Δfur CCNA_03191 PAS-family GGDEF/EAL family protein cofit 39 97
  Pseudomonas syringae pv. syringae B728a Psyr_2711 diguanylate cyclase/phosphodiesterase insig. 38 94
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2711 diguanylate cyclase/phosphodiesterase insig. 38 94
  Sphingobium sp. HT1-2 GFF362 Sensory box/GGDEF family protein cofit 38 93
  Rhizobium sp. OAE497 ABIE40_RS00480 EAL domain-containing protein insig. 39 95
  Paraburkholderia sabiae LMG 24235 QEN71_RS08805 EAL domain-containing protein insig. 37 94
  Paraburkholderia sabiae LMG 24235 QEN71_RS15270 EAL domain-containing protein insig. 38 94
  Pseudomonas syringae pv. syringae B728a Psyr_4493 PAS:GGDEF insig. 36 93
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4493 PAS:GGDEF cofit 36 93
  Rhizobium sp. OAE497 ABIE40_RS02655 EAL domain-containing protein cofit 37 97
  Pseudomonas stutzeri RCH2 Psest_1712 PAS domain S-box/diguanylate cyclase (GGDEF) domain insig. 39 95
  Marinobacter adhaerens HP15 HP15_1500 sensory box/GGDEF family protein insig. 34 96
  Burkholderia phytofirmans PsJN BPHYT_RS13030 diguanylate cyclase insig. 39 95
  Klebsiella pneumoniae MKP103 KDGMDA_25960 GGDEF-domain containing protein insig. 37 95
  Azospirillum brasilense Sp245 AZOBR_RS30045 uncharacterized signaling protein CC_0091 insig. 39 95
  Klebsiella pneumoniae MRSN742743 KFA93_RS07215 putative bifunctional diguanylate cyclase/phosphodiesterase insig. 37 95
  Shewanella loihica PV-4 Shew_0979 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 37 92
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3704 diguanylate cyclase (GGDEF) domain insig. 40 95
  Rhizobium sp. OAE497 ABIE40_RS15540 EAL domain-containing protein insig. 38 95
  Klebsiella michiganensis M5al BWI76_RS18710 GGDEF-domain containing protein strong 38 95
  Ralstonia solanacearum PSI07 RPSI07_RS21070 PAS domain S-box protein insig. 38 95
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01352 diguanylate cyclase/phosphodiesterase insig. 36 96
  Pseudomonas fluorescens SBW25 PFLU_RS16810 EAL domain-containing protein insig. 38 95
  Pseudomonas fluorescens SBW25-INTG PFLU_RS16810 EAL domain-containing protein insig. 38 95
  Ralstonia solanacearum GMI1000 RS_RS02945 PAS domain S-box protein insig. 38 95
  Agrobacterium fabrum C58 Atu3495 diguanylate cyclase sig. 37 95
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3423 PAS domain S-box/diguanylate cyclase (GGDEF) domain insig. 38 93
  Pseudomonas lactucae CFBP13502 GEMAOFIL_03279 hypothetical protein cofit 37 97
  Rhodopseudomonas palustris CGA009 TX73_017630 EAL domain-containing protein insig. 37 93
  Agrobacterium fabrum C58 Atu4628 diguanylate cyclase insig. 36 93
  Sphingobium sp. HT1-2 GFF714 hypothetical protein cofit 38 94
  Shewanella amazonensis SB2B Sama_2405 sensory box protein (RefSeq) insig. 36 96
  Erwinia amylovora T8 OLJFJH_03300 GGDEF domain-containing protein cofit 35 92
  Dechlorosoma suillum PS Dsui_2365 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 35 95
  Sphingomonas koreensis DSMZ 15582 Ga0059261_4157 diguanylate cyclase (GGDEF) domain insig. 37 94
  Paraburkholderia graminis OAS925 ABIE53_003996 diguanylate cyclase (GGDEF)-like protein sig. 36 96
  Dechlorosoma suillum PS Dsui_1429 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 35 94
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS12250 diguanylate cyclase insig. 37 95
  Ralstonia solanacearum UW163 UW163_RS01355 diguanylate cyclase insig. 37 95
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2238 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 36 94
  Paraburkholderia graminis OAS925 ABIE53_002821 diguanylate cyclase (GGDEF)-like protein/PAS domain S-box-containing protein sig. 38 94
  Enterobacter asburiae PDN3 EX28DRAFT_2619 diguanylate cyclase (GGDEF) domain strong 35 94
  Shewanella oneidensis MR-1 SO0141 sensory box protein (NCBI ptt file) strong 35 94
  Marinobacter adhaerens HP15 HP15_806 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 37 93
  Ralstonia sp. UNC404CL21Col ABZR87_RS08150 EAL domain-containing protein insig. 37 96
  Acidovorax sp. GW101-3H11 Ac3H11_448 Sensory box/GGDEF family protein insig. 36 96
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00437 PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein insig. 37 96
  Pseudomonas aeruginosa PUPa3 DQ20_RS37920 EAL domain-containing protein strong 37 95
  Paraburkholderia sabiae LMG 24235 QEN71_RS33665 EAL domain-containing protein insig. 37 97
  Pseudomonas aeruginosa MRSN321 DY961_RS21370 EAL domain-containing protein strong 36 95
  Pseudomonas aeruginosa PA14 IKLFDK_24035 GGDEF domain-containing protein insig. 36 95
  Paraburkholderia sabiae LMG 24235 QEN71_RS10895 cyclic di-GMP phosphodiesterase strong 35 96
  Synechococcus elongatus PCC 7942 Synpcc7942_1859 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 35 94
  Herbaspirillum seropedicae SmR1 HSERO_RS18020 diguanylate cyclase insig. 36 95
  Burkholderia phytofirmans PsJN BPHYT_RS23230 histidine kinase insig. 35 96
  Pseudomonas syringae pv. syringae B728a Psyr_4642 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 36 99
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4642 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 36 99
  Herbaspirillum seropedicae SmR1 HSERO_RS23840 hypothetical protein sig. 37 96
  Enterobacter sp. TBS_079 MPMX20_01206 hypothetical protein strong 37 93
  Pseudomonas simiae WCS417 PS417_14800 diguanylate cyclase insig. 37 93
  Ralstonia solanacearum GMI1000 RS_RS22695 bifunctional diguanylate cyclase/phosphodiesterase insig. 39 95
  Sinorhizobium meliloti 1021 SMa1548 Diguanylate cyclase/phosphodiesterase insig. 35 97
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3422 diguanylate cyclase (GGDEF) domain insig. 37 90
  Rhodopseudomonas palustris CGA009 TX73_004010 EAL domain-containing protein insig. 38 93
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS18290 bifunctional diguanylate cyclase/phosphodiesterase insig. 38 96
  Ralstonia solanacearum UW163 UW163_RS20840 bifunctional diguanylate cyclase/phosphodiesterase insig. 38 96
  Dechlorosoma suillum PS Dsui_0894 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 36 95
  Dechlorosoma suillum PS Dsui_3113 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 39 92
  Methylophilus sp. DMC18 GFF1786 hypothetical protein insig. 35 95
  Dechlorosoma suillum PS Dsui_1011 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 35 96
  Pseudomonas sp. SVBP6 COO64_RS17205 EAL domain-containing protein insig. 37 96
  Ralstonia solanacearum GMI1000 RS_RS02540 bifunctional diguanylate cyclase/phosphodiesterase insig. 37 95
  Desulfovibrio vulgaris Miyazaki F DvMF_0211 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) sig. 37 93
  Caulobacter crescentus NA1000 CCNA_00940 sensory box GGDEF/EAL protein insig. 36 94
  Caulobacter crescentus NA1000 Δfur CCNA_00940 sensory box GGDEF/EAL protein insig. 36 94
  Pseudomonas sp. S08-1 OH686_14965 Sensory box/GGDEF family protein cofit 36 95
  Sinorhizobium meliloti 1021 SM_b20447 hypothetical protein insig. 35 94
  Magnetospirillum magneticum AMB-1 AMB_RS23535 PAS domain S-box protein cofit 35 95
  Pseudomonas sp. RS175 PFR28_01206 hypothetical protein insig. 35 94
  Pseudomonas sp. RS175 PFR28_04760 hypothetical protein strong 35 93
  Herbaspirillum seropedicae SmR1 HSERO_RS02730 histidine kinase insig. 38 95
  Ralstonia sp. UNC404CL21Col ABZR87_RS19215 EAL domain-containing protein cofit 37 95
  Rahnella sp. WP5 EX31_RS07415 bifunctional diguanylate cyclase/phosphodiesterase insig. 36 92
  Rhodopseudomonas palustris CGA009 TX73_021600 EAL domain-containing protein insig. 36 93
  Rahnella sp. WP5 EX31_RS09160 EAL domain-containing protein insig. 36 93
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2512 sensory box/GGDEF domain/EAL domain protein insig. 35 95
  Acidovorax sp. GW101-3H11 Ac3H11_2715 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 35 95
  Agrobacterium fabrum C58 Atu3244 diguanylate cyclase insig. 34 95
  Klebsiella pneumoniae MRSN742743 KFA93_RS24560 EAL domain-containing protein insig. 34 93
  Caulobacter crescentus NA1000 CCNA_00089 MHYT/PAS-family GGDEF/EAL protein cofit 37 94
  Caulobacter crescentus NA1000 Δfur CCNA_00089 MHYT/PAS-family GGDEF/EAL protein cofit 37 94
  Rhodopseudomonas palustris CGA009 TX73_002030 EAL domain-containing protein insig. 36 92
  Pseudomonas stutzeri RCH2 Psest_0263 PAS domain S-box/diguanylate cyclase (GGDEF) domain sig. 35 95
  Lysobacter sp. OAE881 ABIE51_RS14975 EAL domain-containing protein insig. 37 94
  Shewanella amazonensis SB2B Sama_3298 sensory box protein (RefSeq) insig. 36 93
  Agrobacterium fabrum C58 Atu4353 hypothetical protein insig. 36 94