Homologs of Atu0073 from Agrobacterium fabrum C58

recF-like protein
SEED: DNA recombination and repair protein RecF
KEGG: DNA replication and repair protein RecF

107 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Agrobacterium fabrum C58 Atu0073 recF-like protein strong 100 100
o Rhizobium sp. OAE497 ABIE40_RS00200 DNA replication/repair protein RecF sig. 74 100
o Sinorhizobium meliloti 1021 SMc02863 recombination protein F cofit 72 100
o Rhodopseudomonas palustris CGA009 TX73_000015 DNA replication/repair protein RecF insig. 52 98
o Bosea sp. OAE506 ABIE41_RS04170 DNA replication/repair protein RecF insig. 50 98
o Azospirillum sp. SherDot2 MPMX19_02716 DNA replication and repair protein RecF no data 50 98
o Magnetospirillum magneticum AMB-1 AMB_RS03285 DNA replication and repair protein RecF no data 50 98
o Xanthobacter sp. DMC5 GFF3876 DNA replication and repair protein RecF insig. 49 98
o Azospirillum brasilense Sp245 AZOBR_RS17670 recombinase RecF insig. 49 99
o Sphingobium sp. HT1-2 GFF730 DNA recombination and repair protein RecF cofit 48 94
o Sphingomonas koreensis DSMZ 15582 Ga0059261_2727 DNA replication and repair protein RecF no data 49 96
o Phaeobacter inhibens DSM 17395 PGA1_c00030 DNA replication and repair protein RecF strong 45 98
o Caulobacter crescentus NA1000 CCNA_00158 DNA replication and repair protein recF strong 46 99
o Caulobacter crescentus NA1000 Δfur CCNA_00158 DNA replication and repair protein recF cofit 46 99
o Dinoroseobacter shibae DFL-12 Dshi_3375 SMC domain protein (RefSeq) strong 45 97
o Rhodospirillum rubrum S1H Rru_A0003 RecF protein (NCBI) no data 43 98
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS15360 DNA replication/repair protein RecF insig. 44 98
  Marinobacter adhaerens HP15 HP15_3705 DNA replication and repair protein recF sig. 29 99
  Pseudomonas aeruginosa PA14 IKLFDK_25545 DNA replication/repair protein RecF strong 31 99
  Pseudomonas stutzeri RCH2 Psest_0004 recF protein strong 31 99
  Serratia liquefaciens MT49 IAI46_00015 DNA replication/repair protein RecF cofit 29 98
  Pectobacterium carotovorum WPP14 HER17_RS00015 DNA replication/repair protein RecF insig. 29 99
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS15145 DNA replication/repair protein RecF strong 30 98
  Dickeya dadantii 3937 DDA3937_RS21285 DNA replication/repair protein RecF sig. 29 99
  Dickeya dianthicola 67-19 HGI48_RS00015 DNA replication/repair protein RecF insig. 29 99
  Dickeya dianthicola ME23 DZA65_RS00015 DNA replication/repair protein RecF insig. 29 99
  Rahnella sp. WP5 EX31_RS05975 DNA replication/repair protein RecF insig. 31 98
  Pseudomonas putida KT2440 PP_0012 DNA replication and repair protein sig. 28 99
  Pseudomonas segetis P6 ACVTMO_RS01255 recF DNA replication/repair protein RecF insig. 29 99
  Pseudomonas fluorescens FW300-N2E3 AO353_10480 recombinase RecF strong 28 99
  Alteromonas macleodii MIT1002 MIT1002_00003 DNA replication and repair protein RecF insig. 26 98
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS00015 DNA replication/repair protein RecF insig. 30 99
  Pseudomonas syringae pv. syringae B728a Psyr_0003 DNA replication and repair protein RecF strong 28 99
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0003 DNA replication and repair protein RecF strong 28 99
  Pseudomonas sp. RS175 PFR28_04593 DNA replication and repair protein RecF insig. 28 99
  Escherichia coli ECOR38 HEPCGN_13720 recF DNA replication/repair protein RecF cofit 29 99
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1927 DNA recombination and repair protein RecF strong 28 99
  Pseudomonas fluorescens FW300-N2C3 AO356_11635 recombinase RecF strong 28 99
  Escherichia coli BL21 ECD_03583 gap repair protein strong 29 99
  Escherichia fergusonii Becca EFB2_00003 DNA replication and repair protein RecF insig. 29 99
  Escherichia coli ECOR27 NOLOHH_07165 recF DNA replication/repair protein RecF cofit 29 99
  Escherichia coli ECRC100 OKFHMN_15025 recF DNA replication/repair protein RecF insig. 29 99
  Escherichia coli ECRC101 MCAODC_05535 recF DNA replication/repair protein RecF insig. 29 99
  Escherichia coli ECRC102 NIAGMN_12780 recF DNA replication/repair protein RecF cofit 29 99
  Escherichia coli ECRC62 BNILDI_04365 recF DNA replication/repair protein RecF insig. 29 99
  Escherichia coli ECRC98 JDDGAC_18645 recF DNA replication/repair protein RecF sig. 29 99
  Escherichia coli ECRC99 KEDOAH_13125 recF DNA replication/repair protein RecF no data 29 99
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00003 DNA replication and repair protein RecF insig. 29 99
  Escherichia coli Nissle 1917 ECOLIN_RS21310 DNA replication/repair protein RecF insig. 29 99
  Escherichia coli BW25113 b3700 recF recombination protein F (NCBI) strong 29 99
  Pseudomonas sp. DMC3 GFF578 DNA replication and repair protein RecF insig. 28 99
  Shewanella loihica PV-4 Shew_0003 DNA replication and repair protein RecF (RefSeq) strong 28 99
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_17475 DNA replication and repair protein RecF strong 27 92
  Pseudomonas orientalis W4I3 QF045_RS02960 DNA replication/repair protein RecF insig. 29 99
  Pseudomonas sp. BP01 JOY50_RS08340 recF DNA replication/repair protein RecF insig. 28 99
  Pseudomonas fluorescens SBW25 PFLU_RS00015 DNA replication/repair protein RecF insig. 28 99
  Pseudomonas fluorescens SBW25-INTG PFLU_RS00015 DNA replication/repair protein RecF sig. 28 99
  Pseudomonas sp. SVBP6 COO64_RS02120 recF DNA replication/repair protein RecF insig. 28 99
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS24760 DNA replication and repair protein RecF strong 26 98
  Pantoea sp. MT58 IAI47_00015 DNA replication/repair protein RecF insig. 27 98
  Pseudomonas simiae WCS417 PS417_00015 recombinase RecF strong 28 99
  Pseudomonas sp. S08-1 OH686_12620 DNA recombination and repair protein RecF insig. 29 99
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS21650 DNA replication/repair protein RecF insig. 26 98
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00183 DNA replication and repair protein RecF insig. 28 99
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS19305 DNA replication/repair protein RecF cofit 27 98
  Rhodanobacter sp. FW510-T8 OKGIIK_15255 recF DNA replication/repair protein RecF insig. 29 99
  Shewanella oneidensis MR-1 SO0010 recF DNA replication and repair protein RecF (NCBI ptt file) strong 27 99
  Klebsiella pneumoniae MKP103 KDGMDA_08670 DNA replication/repair protein RecF sig. 28 99
  Klebsiella pneumoniae MRSN742743 KFA93_RS08465 recF;go_function=single-stranded DNA replication/repair protein RecF sig. 28 99
  Pseudomonas fluorescens GW456-L13 PfGW456L13_664 DNA recombination and repair protein RecF sig. 28 96
  Enterobacter sp. TBS_079 MPMX20_00003 DNA replication and repair protein RecF strong 28 99
  Erwinia amylovora T8 OLJFJH_05150 DNA replication/repair protein RecF insig. 28 98
  Erwinia tracheiphila SCR3 LU632_RS00015 recF DNA replication/repair protein RecF sig. 28 98
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4197 DNA recombination and repair protein RecF strong 28 96
  Klebsiella michiganensis M5al BWI76_RS00010 DNA replication and repair protein RecF sig. 29 98
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS08475 DNA replication/repair protein RecF sig. 29 97
  Shewanella amazonensis SB2B Sama_0015 recF recombination protein F (RefSeq) strong 27 99
  Lysobacter sp. OAE881 ABIE51_RS00765 DNA replication/repair protein RecF insig. 30 99
  Vibrio cholerae E7946 ATCC 55056 CSW01_00065 DNA replication and repair protein RecF sig. 26 98
  Rhodanobacter denitrificans MT42 LRK55_RS08240 DNA replication/repair protein RecF insig. 29 97
  Shewanella sp. ANA-3 Shewana3_0011 recF recombination protein F (RefSeq) strong 27 99
  Enterobacter asburiae PDN3 EX28DRAFT_3987 DNA replication and repair protein RecF cofit 28 99
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_09800 recF DNA replication/repair protein RecF insig. 27 98
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1756 DNA recombination and repair protein RecF cofit 27 99
  Kangiella aquimarina DSM 16071 B158DRAFT_0366 DNA replication and repair protein RecF strong 26 99
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4.1 DNA recombination and repair protein RecF insig. 29 99
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1156 recF protein strong 26 92
  Mycobacterium tuberculosis H37Rv Rv0003 DNA replication and repair protein RecF (single-strand DNA binding protein) cofit 30 88
  Bacteroides stercoris CC31F HMPREF1181_RS06185 DNA replication and repair protein RecF insig. 27 98
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS17135 DNA replication and repair protein RecF strong 27 98
  Acinetobacter radioresistens SK82 MPMX26_00003 DNA replication and repair protein RecF insig. 25 98
  Acinetobacter baumannii LAC-4 RR41_RS00015 DNA replication/repair protein RecF insig. 25 99
  Bacteroides ovatus ATCC 8483 BACOVA_05088 DNA replication and repair protein RecF insig. 27 98
  Phocaeicola dorei CL03T12C01 ABI39_RS13135 DNA replication and repair protein RecF insig. 26 98
  Fusobacterium nucleatum SB010 HUW76_00025 DNA replication/repair protein RecF no data 21 98
  Bacteroides thetaiotaomicron VPI-5482 BT4255 DNA replication and repair protein RecF, ABC family ATPase (NCBI ptt file) strong 27 98
  Cellulophaga baltica 18 M666_RS11055 DNA replication and repair protein RecF sig. 25 93
  Synechococcus elongatus PCC 7942 Synpcc7942_2250 recF recombination protein F strong 28 98
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS14620 DNA replication and repair protein RecF strong 25 97
  Bifidobacterium breve UCC2003 BBR_RS10265 DNA replication and repair protein RecF strong 27 89
  Variovorax sp. SCN45 GFF7580 DNA recombination and repair protein RecF no data 27 55
  Synechocystis sp000284455 PCC 6803 SGL_RS07025 DNA replication/repair protein RecF no data 26 98
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2313 condensin subunit Smc insig. 33 30
  Sphingobium sp. HT1-2 GFF1065 Chromosome partition protein smc cofit 30 30
  Dickeya dianthicola 67-19 HGI48_RS00185 AAA family ATPase insig. 27 54
  Paraburkholderia sabiae LMG 24235 QEN71_RS44070 ATPase, T2SS/T4P/T4SS family insig. 43 14
  Variovorax sp. SCN45 GFF4373 FIG131328: Predicted ATP-dependent endonuclease of the OLD family insig. 38 14