Homologs of ABZR87_RS13315 from Ralstonia sp. UNC404CL21Col

RluA family pseudouridine synthase
SEED: Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)
KEGG: ribosomal large subunit pseudouridine synthase D

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Ralstonia sp. UNC404CL21Col ABZR87_RS13315 RluA family pseudouridine synthase strong 100 100
o Ralstonia solanacearum PSI07 RPSI07_RS15970 RluA family pseudouridine synthase insig. 89 100
o Ralstonia solanacearum GMI1000 RS_RS08205 RluA family pseudouridine synthase sig. 88 100
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS01520 RluA family pseudouridine synthase insig. 88 100
o Ralstonia solanacearum UW163 UW163_RS14830 RluA family pseudouridine synthase insig. 88 100
o Cupriavidus basilensis FW507-4G11 RR42_RS07590 pseudouridine synthase strong 65 99
o Paraburkholderia sabiae LMG 24235 QEN71_RS22215 RluA family pseudouridine synthase no data 66 85
o Paraburkholderia graminis OAS925 ABIE53_002062 23S rRNA pseudouridine1911/1915/1917 synthase strong 60 99
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00848 ribosomal large subunit pseudouridine synthase D (EC 5.4.99.-) insig. 59 98
o Burkholderia phytofirmans PsJN BPHYT_RS09135 ribosomal large subunit pseudouridine synthase D sig. 60 98
o Herbaspirillum seropedicae SmR1 HSERO_RS15070 ribosomal large subunit pseudouridine synthase D insig. 52 87
o Methylophilus sp. DMC18 GFF1213 Ribosomal large subunit pseudouridine synthase D insig. 52 83
o Dechlorosoma suillum PS Dsui_2530 pseudouridine synthase, RluA family sig. 53 87
o Pseudomonas putida KT2440 PP_0623 23S rRNA pseudouridine(1911,1915,1917) synthase no data 52 86
o Marinobacter adhaerens HP15 HP15_527 pseudouridine synthase, RluA family strong 52 83
o Pseudomonas sp. BP01 JOY50_RS27130 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD sig. 51 86
o Pseudomonas fluorescens FW300-N2C3 AO356_15925 ribosomal large subunit pseudouridine synthase D strong 51 86
o Pseudomonas syringae pv. syringae B728a Psyr_0726 ribosomal large subunit pseudouridine synthase D strong 50 86
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0726 ribosomal large subunit pseudouridine synthase D strong 50 86
o Pseudomonas fluorescens FW300-N2E3 AO353_14220 ribosomal large subunit pseudouridine synthase D strong 50 86
o Pseudomonas lactucae CFBP13502 GEMAOFIL_00969 Ribosomal large subunit pseudouridine synthase D cofit 50 86
o Pseudomonas stutzeri RCH2 Psest_0709 pseudouridine synthase, RluA family strong 50 86
o Pseudomonas segetis P6 MPMX49_03922 Ribosomal large subunit pseudouridine synthase D strong 50 86
o Pseudomonas sp. DMC3 GFF4004 Ribosomal large subunit pseudouridine synthase D cofit 49 86
o Pseudomonas sp. RS175 PFR28_03748 Ribosomal large subunit pseudouridine synthase D strong 51 84
o Pseudomonas sp. SVBP6 COO64_RS11055 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD sig. 50 86
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2822 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) no data 50 84
o Pseudomonas sp. S08-1 OH686_16410 LSU rRNA pseudouridine(1911/1915/1917) synthase cofit 49 86
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5127 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) no data 51 84
o Pseudomonas fluorescens SBW25 PFLU_RS03870 23S rRNA pseudouridine(1911/1915/1917) synthase RluD insig. 49 86
o Pseudomonas fluorescens SBW25-INTG PFLU_RS03870 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 49 86
o Pseudomonas simiae WCS417 PS417_03820 ribosomal large subunit pseudouridine synthase D no data 50 86
o Castellaniella sp019104865 MT123 ABCV34_RS01885 RluA family pseudouridine synthase strong 49 92
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1493 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) no data 50 84
o Rhodanobacter denitrificans MT42 LRK55_RS04745 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 51 84
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS04965 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 51 84
o Dickeya dianthicola ME23 DZA65_RS17330 23S rRNA pseudouridine(1911/1915/1917) synthase RluD cofit 50 85
o Lysobacter sp. OAE881 ABIE51_RS04885 23S rRNA pseudouridine(1911/1915/1917) synthase RluD cofit 51 86
o Shewanella sp. ANA-3 Shewana3_3171 ribosomal large subunit pseudouridine synthase D (RefSeq) strong 51 84
o Shewanella loihica PV-4 Shew_2950 RluA family pseudouridine synthase (RefSeq) strong 50 85
o Pseudomonas aeruginosa PA14 IKLFDK_00810 23S rRNA pseudouridine(1911/1915/1917) synthase RluD cofit 50 86
o Dickeya dianthicola 67-19 HGI48_RS16235 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 50 84
o Acidovorax sp. GW101-3H11 Ac3H11_1787 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) sig. 50 86
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS05045 23S rRNA pseudouridine(1911/1915/1917) synthase RluD no data 51 84
o Dickeya dadantii 3937 DDA3937_RS16110 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 49 85
o Rhodanobacter sp. FW510-T8 OKGIIK_01790 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 51 84
o Shewanella amazonensis SB2B Sama_2605 pseudouridylate synthase (RefSeq) no data 50 85
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_26870 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 49 84
o Erwinia tracheiphila SCR3 LU632_RS16945 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD sig. 49 84
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4870 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) sig. 50 84
o Variovorax sp. OAS795 ABID97_RS14190 RluA family pseudouridine synthase strong 52 84
o Pectobacterium carotovorum WPP14 HER17_RS05400 23S rRNA pseudouridine(1911/1915/1917) synthase RluD sig. 48 85
o Escherichia coli ECOR38 HEPCGN_20375 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 48 84
o Erwinia amylovora T8 OLJFJH_09725 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 47 85
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4182 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) strong 48 84
o Kangiella aquimarina DSM 16071 B158DRAFT_2532 Pseudouridylate synthases, 23S RNA-specific strong 48 84
o Escherichia fergusonii Becca EFB2_01296 Ribosomal large subunit pseudouridine synthase D sig. 48 84
o Escherichia coli Nissle 1917 ECOLIN_RS14675 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 48 84
o Escherichia coli BL21 ECD_02484 23S rRNA pseudouridine(1911,1915,1917) synthase strong 47 84
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01112 Ribosomal large subunit pseudouridine synthase D sig. 47 84
o Escherichia coli BW25113 b2594 rluD 23S rRNA pseudouridine synthase (NCBI) no data 47 84
o Escherichia coli ECOR27 NOLOHH_12925 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD cofit 48 84
o Escherichia coli ECRC62 BNILDI_11730 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 48 84
o Escherichia coli ECRC100 OKFHMN_21250 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD cofit 47 84
o Escherichia coli ECRC101 MCAODC_11780 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 47 84
o Escherichia coli ECRC102 NIAGMN_19020 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 47 84
o Escherichia coli ECRC98 JDDGAC_24915 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 47 84
o Escherichia coli ECRC99 KEDOAH_06970 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD no data 47 84
o Alteromonas macleodii MIT1002 MIT1002_02679 Ribosomal large subunit pseudouridine synthase D cofit 51 83
o Rahnella sp. WP5 EX31_RS07570 23S rRNA pseudouridine(1911/1915/1917) synthase RluD cofit 48 84
o Serratia liquefaciens MT49 IAI46_03985 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 48 84
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS10965 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 49 84
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1362.1 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) sig. 49 84
o Klebsiella pneumoniae MKP103 KDGMDA_02140 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 47 85
o Variovorax sp. SCN45 GFF988 LSU rRNA pseudouridine(1911/1915/1917) synthase (EC 5.4.99.23) cofit 50 85
o Enterobacter asburiae PDN3 EX28DRAFT_2695 pseudouridine synthase, RluA family cofit 47 84
o Klebsiella michiganensis M5al BWI76_RS21450 23S rRNA pseudouridine(1911/1915/1917) synthase sig. 48 84
o Enterobacter sp. TBS_079 MPMX20_03463 Ribosomal large subunit pseudouridine synthase D strong 47 84
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0642 pseudouridine synthase, RluA family strong 43 89
o Pantoea sp. MT58 IAI47_04425 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 48 84
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS16540 23S rRNA pseudouridine(1911/1915/1917) synthase RluD cofit 48 84
o Acinetobacter baumannii LAC-4 RR41_RS15070 23S rRNA pseudouridine(1911/1915/1917) synthase RluD insig. 45 84
o Vibrio cholerae E7946 ATCC 55056 CSW01_03695 ribosomal large subunit pseudouridine synthase D strong 46 85
o Acinetobacter radioresistens SK82 MPMX26_00735 Ribosomal large subunit pseudouridine synthase D strong 44 91
o Azospirillum sp. SherDot2 MPMX19_05442 Ribosomal large subunit pseudouridine synthase D strong 48 83
o Sphingobium sp. HT1-2 GFF4062 LSU rRNA pseudouridine(1911/1915/1917) synthase (EC 5.4.99.23) cofit 43 85
o Phocaeicola dorei CL03T12C01 ABI39_RS02845 RluA family pseudouridine synthase strong 41 90
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS08615 RluA family pseudouridine synthase strong 41 90
o Sphingomonas koreensis DSMZ 15582 Ga0059261_0664 pseudouridine synthase, RluA family strong 44 85
o Xanthobacter sp. DMC5 GFF2508 Ribosomal large subunit pseudouridine synthase D insig. 43 92
o Bacteroides stercoris CC31F HMPREF1181_RS03250 RluA family pseudouridine synthase strong 39 90
o Bacteroides thetaiotaomicron VPI-5482 BT3712 ribosomal large subunit pseudouridine synthase D (NCBI ptt file) strong 40 90
o Magnetospirillum magneticum AMB-1 AMB_RS16095 RluA family pseudouridine synthase insig. 43 85
o Bacteroides ovatus ATCC 8483 BACOVA_03528 pseudouridine synthase, RluA family strong 40 90
o Cellulophaga baltica 18 M666_RS09010 RluA family pseudouridine synthase sig. 37 91
o Synechocystis sp000284455 PCC 6803 SGL_RS11530 RluA family pseudouridine synthase strong 44 83
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS03985 RluA family pseudouridine synthase sig. 37 87
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_15205 RNA pseudouridine synthase strong 40 91
o Rhodospirillum rubrum S1H Rru_A1111 Pseudouridine synthase, RluD (NCBI) strong 42 88
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS12640 RluA family pseudouridine synthase strong 41 80