| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
|---|
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS06400 | | response regulator transcription factor | strong | 100 | 100 |
| o | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS10600 | | DNA-binding response regulator | strong | 100 | 100 |
| o | Ralstonia solanacearum UW163 | UW163_RS02980 | | DNA-binding response regulator | strong | 100 | 100 |
| o | Ralstonia solanacearum GMI1000 | RS_RS01435 | | DNA-binding response regulator | strong | 99 | 100 |
| o | Ralstonia solanacearum PSI07 | RPSI07_RS22720 | | DNA-binding response regulator | strong | 99 | 100 |
| o | Cupriavidus basilensis FW507-4G11 | RR42_RS00785 | | LuxR family transcriptional regulator | insig. | 88 | 100 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00410 | | two component transcriptional regulator, LuxR family | insig. | 64 | 100 |
| o | Burkholderia phytofirmans PsJN | BPHYT_RS13150 | | hisitidine kinase | no data | 62 | 100 |
| o | Paraburkholderia sabiae LMG 24235 | QEN71_RS05525 | | response regulator transcription factor | insig. | 63 | 100 |
| o | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2789 | | DNA-binding response regulator, LuxR family | insig. | 59 | 100 |
| o | Methylophilus sp. DMC18 | GFF88 | | Response regulator UvrY | insig. | 58 | 100 |
| o | Variovorax sp. OAS795 | ABID97_RS07360 | | response regulator transcription factor | strong | 59 | 100 |
| o | Variovorax sp. SCN45 | GFF2564 | | Two-component transcriptional response regulator, LuxR family | cofit | 59 | 100 |
| | Variovorax sp. SCN45 | GFF5597 | | Two-component transcriptional response regulator, LuxR family | insig. | 58 | 100 |
| o | Acidovorax sp. GW101-3H11 | Ac3H11_3852 | | DNA-binding response regulator, LuxR family | no data | 58 | 100 |
| o | Collimonas humicola GW821-FHT01A05 | MPMX01_03984 | | Response regulator UvrY | insig. | 52 | 100 |
| o | Herbaspirillum seropedicae SmR1 | HSERO_RS13890 | | LuxR family transcriptional regulator | strong | 56 | 100 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS06015 | | hisitidine kinase | strong | 52 | 100 |
| | Methylophilus sp. DMC18 | GFF1242 | | Response regulator UvrY | cofit | 51 | 99 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_1417 | | Regulatory protein, LuxR:Response regulator receiver | cofit | 50 | 100 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1472 | | Regulatory protein, LuxR:Response regulator receiver | cofit | 50 | 100 |
| | Variovorax sp. SCN45 | GFF850 | | Two-component transcriptional response regulator, LuxR family | insig. | 48 | 98 |
| o | Dechlorosoma suillum PS | Dsui_3469 | | response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | cofit | 45 | 99 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS10275 | | LuxR family transcriptional regulator | sig. | 44 | 100 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS00505 | | response regulator transcription factor RqpR | strong | 46 | 100 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS42425 | | response regulator transcription factor | insig. | 45 | 100 |
| o | Paraburkholderia graminis OAS925 | ABIE53_000448 | | two-component system invasion response regulator UvrY | strong | 46 | 100 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS32080 | | response regulator transcription factor | insig. | 45 | 100 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS30900 | | transcriptional regulator | sig. | 46 | 100 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03107 | | two component transcriptional regulator, LuxR family | no data | 47 | 100 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS31295 | | LuxR family transcriptional regulator | insig. | 51 | 100 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02179 | | two component transcriptional regulator, LuxR family | cofit | 45 | 100 |
| | Paraburkholderia graminis OAS925 | ABIE53_004191 | | DNA-binding NarL/FixJ family response regulator | strong | 46 | 100 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS01790 | | LuxR family transcriptional regulator | strong | 45 | 100 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS27730 | | LuxR family transcriptional regulator | no data | 48 | 100 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS36960 | | response regulator transcription factor | insig. | 48 | 100 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS08970 | | response regulator transcription factor | insig. | 47 | 100 |
| | Dechlorosoma suillum PS | Dsui_2158 | | response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | cofit | 45 | 99 |
| o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3685 | | DNA-binding response regulator, LuxR family | insig. | 46 | 99 |
| o | Pseudomonas fluorescens FW300-N2C3 | AO356_29835 | | LuxR family transcriptional regulator | insig. | 46 | 100 |
| | Collimonas humicola GW821-FHT01A05 | MPMX01_04216 | | Response regulator UvrY | insig. | 44 | 100 |
| o | Pseudomonas sp. RS175 | PFR28_01435 | | Response regulator UvrY | insig. | 46 | 100 |
| o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1774 | | DNA-binding response regulator, LuxR family, near polyamine transporter | insig. | 45 | 100 |
| o | Pseudomonas syringae pv. syringae B728a | Psyr_4618 | | regulatory protein, LuxR:Response regulator receiver | insig. | 45 | 100 |
| o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_4618 | | regulatory protein, LuxR:Response regulator receiver | insig. | 45 | 100 |
| o | Vibrio cholerae E7946 ATCC 55056 | CSW01_06135 | | two-component system response regulator UvrY | no data | 40 | 100 |
| | Paraburkholderia graminis OAS925 | ABIE53_002843 | | DNA-binding NarL/FixJ family response regulator | sig. | 61 | 67 |
| o | Pseudomonas stutzeri RCH2 | Psest_3659 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | insig. | 43 | 100 |
| o | Pseudomonas sp. SVBP6 | COO64_RS22465 | | response regulator transcription factor | insig. | 43 | 100 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1948 | | Transcriptional regulatory protein UhpA | insig. | 45 | 96 |
| | Pseudomonas sp. RS175 | PFR28_04055 | | Response regulator UvrY | strong | 43 | 100 |
| o | Pseudomonas sp. S08-1 | OH686_15085 | | DNA-binding response regulator, LuxR family, near polyamine transporter | insig. | 43 | 100 |
| o | Pseudomonas sp. DMC3 | GFF28 | | Response regulator UvrY | insig. | 42 | 100 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS27420 | | response regulator transcription factor | insig. | 42 | 100 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS27420 | | response regulator transcription factor | insig. | 42 | 100 |
| o | Pseudomonas simiae WCS417 | PS417_25765 | | transcriptional regulator | insig. | 42 | 100 |
| o | Pseudomonas protegens RBAN4 | FABNJH_28400 | citB | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains | insig. | 42 | 100 |
| o | Pseudomonas lactucae CFBP13502 | GEMAOFIL_05273 | | Response regulator UvrY | cofit | 43 | 100 |
| o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_2537 | | DNA-binding response regulator, LuxR family, near polyamine transporter | insig. | 42 | 100 |
| o | Pseudomonas orientalis W4I3 | QF045_RS00165 | | response regulator transcription factor | insig. | 43 | 100 |
| o | Pseudomonas sp. FW215-L2 | GFF27 | | Response regulator UvrY | insig. | 42 | 100 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_1209 | | DNA-binding response regulator, LuxR family, near polyamine transporter | insig. | 41 | 100 |
| o | Pseudomonas fluorescens FW300-N2E3 | AO353_07270 | | transcriptional regulator | insig. | 42 | 100 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_14380 | | transcriptional regulator | insig. | 42 | 100 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_4814 | | DNA-binding response regulator, LuxR family, near polyamine transporter | insig. | 42 | 100 |
| o | Pectobacterium carotovorum WPP14 | HER17_RS07710 | | UvrY/SirA/GacA family response regulator transcription factor | strong | 40 | 99 |
| o | Pseudomonas putida KT2440 | PP_0410 | | DNA-binding response regulator UhpA | strong | 44 | 100 |
| | Pseudomonas sp. RS175 | PFR28_01410 | | Response regulator GacA | strong | 41 | 100 |
| o | Erwinia amylovora T8 | OLJFJH_08145 | | DNA-binding response regulator | cofit | 41 | 99 |
| o | Rahnella sp. WP5 | EX31_RS24145 | | UvrY/SirA/GacA family response regulator transcription factor | cofit | 39 | 99 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS20025 | | response regulator transcription factor | insig. | 44 | 99 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS15210 | | DNA-binding response regulator | insig. | 45 | 99 |
| o | Escherichia coli BW25113 | b1914 | uvrY | response regulator (NCBI) | strong | 42 | 100 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS09600 | | LuxR family transcriptional regulator | insig. | 44 | 99 |
| o | Pseudomonas sp. BP01 | JOY50_RS18185 | | response regulator transcription factor | insig. | 43 | 100 |
| o | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_05655 | citB | DNA-binding response regulator | cofit | 41 | 99 |
| o | Erwinia tracheiphila SCR3 | LU632_RS03195 | | response regulator transcription factor | strong | 41 | 99 |
| | Ralstonia solanacearum GMI1000 | RS_RS00950 | | DNA-binding response regulator | strong | 44 | 99 |
| o | Serratia liquefaciens MT49 | IAI46_09205 | | UvrY/SirA/GacA family response regulator transcription factor | strong | 40 | 99 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS02005 | | DNA-binding response regulator | insig. | 44 | 99 |
| | Ralstonia solanacearum UW163 | UW163_RS15330 | | DNA-binding response regulator | insig. | 44 | 99 |
| o | Escherichia fergusonii Becca | EFB2_02032 | | Response regulator UvrY | cofit | 41 | 100 |
| o | Escherichia coli ECOR27 | NOLOHH_16440 | uvrY | UvrY/SirA/GacA family response regulator transcription factor | strong | 41 | 100 |
| o | Escherichia coli ECRC62 | BNILDI_15230 | uvrY | UvrY/SirA/GacA family response regulator transcription factor | insig. | 41 | 100 |
| o | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01815 | | Response regulator UvrY | insig. | 41 | 100 |
| o | Escherichia coli Nissle 1917 | ECOLIN_RS10900 | | UvrY/SirA/GacA family response regulator transcription factor | no data | 41 | 100 |
| o | Pseudomonas aeruginosa MRSN321 | PFGADD_00611 | | Response regulator | strong | 41 | 100 |
| o | Pseudomonas aeruginosa PA14 | IKLFDK_22405 | | DNA-binding response regulator | strong | 41 | 100 |
| o | Pseudomonas aeruginosa PUPa3 | NPBIFN_00615 | | Response regulator | strong | 41 | 100 |
| o | Dickeya dianthicola 67-19 | HGI48_RS11705 | | response regulator | insig. | 40 | 100 |
| o | Dickeya dianthicola ME23 | DZA65_RS12190 | | response regulator transcription factor | insig. | 40 | 100 |
| o | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF1699 | | BarA-associated response regulator UvrY (= GacA = SirA) | cofit | 40 | 100 |
| o | Shewanella sp. ANA-3 | Shewana3_1608 | | response regulator (RefSeq) | strong | 38 | 100 |
| | Pseudomonas sp. SVBP6 | COO64_RS13925 | uvrY | UvrY/SirA/GacA family response regulator transcription factor | cofit | 41 | 100 |
| | Pseudomonas sp. BP01 | JOY50_RS06870 | uvrY | UvrY/SirA/GacA family response regulator transcription factor | cofit | 41 | 100 |
| o | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_09180 | | DNA-binding response regulator | insig. | 39 | 100 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS10765 | | UvrY/SirA/GacA family response regulator transcription factor | strong | 42 | 100 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS10765 | | UvrY/SirA/GacA family response regulator transcription factor | strong | 42 | 100 |
| | Pseudomonas simiae WCS417 | PS417_10720 | | chemotaxis protein CheY | strong | 42 | 100 |
| o | Enterobacter asburiae PDN3 | EX28DRAFT_0633 | | two component transcriptional regulator, LuxR family | strong | 41 | 100 |
| o | Enterobacter sp. TBS_079 | MPMX20_02839 | | Response regulator UvrY | strong | 41 | 100 |
| o | Shewanella oneidensis MR-1 | SO1860 | | DNA-binding response regulator, LuxR family (NCBI ptt file) | strong | 38 | 100 |
| | Pseudomonas orientalis W4I3 | QF045_RS12800 | | UvrY/SirA/GacA family response regulator transcription factor | strong | 42 | 100 |
| o | Escherichia coli ECOR38 | HEPCGN_04175 | uvrC | excinuclease ABC subunit UvrC | cofit | 41 | 100 |
| o | Escherichia coli ECRC100 | OKFHMN_25820 | uvrC | excinuclease ABC subunit UvrC | cofit | 41 | 100 |
| o | Escherichia coli ECRC101 | MCAODC_19570 | uvrC | excinuclease ABC subunit UvrC | insig. | 41 | 100 |
| o | Escherichia coli ECRC102 | NIAGMN_02230 | uvrC | excinuclease ABC subunit UvrC | insig. | 41 | 100 |
| o | Escherichia coli ECRC98 | JDDGAC_00410 | uvrC | excinuclease ABC subunit UvrC | insig. | 41 | 100 |
| o | Escherichia coli ECRC99 | KEDOAH_02270 | uvrC | excinuclease ABC subunit UvrC | no data | 41 | 100 |
| o | Dickeya dadantii 3937 | DDA3937_RS11645 | | response regulator transcription factor | insig. | 40 | 100 |
| o | Klebsiella michiganensis M5al | BWI76_RS18335 | | DNA-binding response regulator | strong | 40 | 100 |
| | Pseudomonas putida KT2440 | PP_4099 | | two-componenent system BarA/UvrY - regulatory subunit | strong | 40 | 100 |
| | Variovorax sp. SCN45 | GFF4727 | | Two-component transcriptional response regulator, LuxR family | insig. | 41 | 100 |
| o | Pseudomonas segetis P6 | ACVTMO_RS12520 | gacA | response regulator transcription factor GacA | strong | 40 | 100 |
| o | Klebsiella pneumoniae MKP103 | KDGMDA_25600 | | UvrY/SirA/GacA family response regulator transcription factor | strong | 40 | 100 |
| o | Klebsiella pneumoniae MRSN742743 | GJGHJB_01761 | uvrY | UvrY/SirA/GacA family response regulator transcription factor | strong | 40 | 100 |
| o | Shewanella loihica PV-4 | Shew_1824 | | response regulator (RefSeq) | no data | 40 | 100 |
| | Erwinia amylovora T8 | OLJFJH_15795 | | UvrY/SirA/GacA family response regulator transcription factor | strong | 39 | 99 |
| | Dickeya dianthicola 67-19 | HGI48_RS13800 | | UvrY/SirA/GacA family response regulator transcription factor | cofit | 38 | 99 |
| | Dickeya dianthicola ME23 | DZA65_RS14290 | | UvrY/SirA/GacA family response regulator transcription factor | strong | 38 | 99 |
| o | Acinetobacter baumannii LAC-4 | RR41_RS17790 | | response regulator | sig. | 42 | 100 |
| | Pectobacterium carotovorum WPP14 | HER17_RS10030 | | response regulator transcription factor | cofit | 39 | 99 |
| o | Pantoea sp. MT58 | IAI47_12470 | | UvrY/SirA/GacA family response regulator transcription factor | strong | 38 | 99 |
| o | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13516_RS12550 | uvrY | UvrY/SirA/GacA family response regulator transcription factor | strong | 37 | 99 |
| | Erwinia tracheiphila SCR3 | LU632_RS10190 | uvrY | UvrY/SirA/GacA family response regulator transcription factor | no data | 38 | 100 |
| | Dickeya dadantii 3937 | DDA3937_RS13705 | | UvrY/SirA/GacA family response regulator transcription factor | strong | 37 | 99 |
| o | Kangiella aquimarina DSM 16071 | B158DRAFT_1272 | | two component transcriptional regulator, LuxR family | strong | 40 | 100 |
| | Pseudomonas sp. S08-1 | OH686_00335 | | BarA-associated response regulator UvrY ( GacA SirA) | strong | 39 | 100 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_20735 | uvrY | UvrY/SirA/GacA family response regulator transcription factor | no data | 37 | 100 |
| o | Acinetobacter radioresistens SK82 | MPMX26_00164 | | Response regulator GacA | strong | 41 | 100 |
| | Pseudomonas stutzeri RCH2 | Psest_2260 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | strong | 39 | 100 |
| | Kangiella aquimarina DSM 16071 | B158DRAFT_1737 | | two component transcriptional regulator, LuxR family | insig. | 38 | 100 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_17605 | | DNA-binding response regulator | insig. | 41 | 100 |
| o | Magnetospirillum magneticum AMB-1 | AMB_RS18540 | | DNA-binding response regulator | cofit | 40 | 99 |
| o | Shewanella amazonensis SB2B | Sama_1607 | | response regulator (RefSeq) | strong | 39 | 100 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_2897 | | regulatory protein, LuxR:Response regulator receiver | strong | 37 | 100 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2897 | | regulatory protein, LuxR:Response regulator receiver | strong | 37 | 100 |
| | Pseudomonas aeruginosa MRSN321 | PFGADD_02498 | uvrY | UvrY/SirA/GacA family response regulator transcription factor | strong | 38 | 100 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_12975 | | UvrY/SirA/GacA family response regulator transcription factor | strong | 38 | 100 |
| | Pseudomonas aeruginosa PUPa3 | NPBIFN_02474 | uvrY | UvrY/SirA/GacA family response regulator transcription factor | strong | 38 | 100 |
| | Methylophilus sp. DMC18 | GFF1286 | | Response regulator UvrY | no data | 38 | 100 |
| o | Rhodanobacter denitrificans MT42 | LRK55_RS17740 | | response regulator | strong | 39 | 100 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS11530 | | LuxR family transcriptional regulator | insig. | 39 | 99 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS11330 | | response regulator transcription factor | insig. | 39 | 100 |
| o | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS11600 | | response regulator transcription factor | insig. | 39 | 100 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS16955 | | response regulator transcription factor | insig. | 39 | 100 |
| o | Alteromonas macleodii MIT1002 | MIT1002_02154 | | Response regulator UvrY | strong | 37 | 100 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS11475 | | response regulator | insig. | 38 | 100 |
| o | Rhodanobacter sp. FW510-T8 | OKGIIK_07415 | | DNA-binding response regulator | insig. | 38 | 100 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS21635 | | DNA-binding response regulator | no data | 37 | 99 |
| | Ralstonia solanacearum UW163 | UW163_RS17550 | | DNA-binding response regulator | insig. | 37 | 99 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS01490 | | DNA-binding response regulator | insig. | 38 | 99 |
| | Ralstonia solanacearum GMI1000 | RS_RS18990 | | DNA-binding response regulator | insig. | 37 | 99 |
| o | Marinobacter adhaerens HP15 | HP15_1567 | | two component transcriptional regulator, LuxR family | strong | 37 | 100 |
| | Pectobacterium carotovorum WPP14 | HER17_RS14245 | | response regulator transcription factor | insig. | 39 | 100 |
| | Variovorax sp. OAS795 | ABID97_RS12700 | | response regulator transcription factor | insig. | 39 | 100 |
| o | Cellulophaga baltica 18 | M666_RS08335 | | response regulator transcription factor | strong | 40 | 95 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_00355 | | chemotaxis protein CheY | strong | 39 | 91 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2022 | | BarA-associated response regulator UvrY (= GacA = SirA) | strong | 39 | 91 |
| | Pseudomonas protegens RBAN4 | FABNJH_18300 | uvrY | UvrY/SirA/GacA family response regulator transcription factor | insig. | 39 | 91 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS22180 | | response regulator transcription factor | sig. | 37 | 99 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_21830 | | chemotaxis protein CheY | strong | 40 | 91 |
| | Pseudomonas sp. DMC3 | GFF3646 | | Response regulator GacA | cofit | 39 | 91 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5619 | | BarA-associated response regulator UvrY (= GacA = SirA) | strong | 39 | 91 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_2885 | | BarA-associated response regulator UvrY (= GacA = SirA) | strong | 39 | 91 |
| o | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS02715 | | response regulator | insig. | 35 | 100 |
| | Collimonas humicola GW821-FHT01A05 | MPMX01_03944 | | Transcriptional regulatory protein DegU | insig. | 35 | 99 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02232 | | Response regulator GacA | cofit | 41 | 91 |
| | Pseudomonas sp. FW215-L2 | GFF5041 | | Response regulator UvrY | strong | 41 | 91 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_1897 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | strong | 36 | 94 |
| | Pseudomonas stutzeri RCH2 | Psest_2048 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | strong | 39 | 99 |
| | Pseudomonas stutzeri RCH2 | Psest_0662 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | insig. | 36 | 99 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS06830 | | DNA-binding response regulator | insig. | 36 | 100 |
| | Methylophilus sp. DMC18 | GFF35 | | Transcriptional activator protein ExaE | no data | 34 | 100 |
| | Cellulophaga baltica 18 | M666_RS04555 | | response regulator transcription factor | sig. | 35 | 99 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS10190 | | LuxR family transcriptional regulator | insig. | 43 | 98 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_2030 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | insig. | 35 | 100 |
| | Pseudomonas aeruginosa MRSN321 | PFGADD_01083 | narL | two-component system response regulator NarL | insig. | 34 | 99 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_19985 | | two-component system response regulator NarL | no data | 34 | 99 |
| | Pseudomonas aeruginosa PUPa3 | NPBIFN_01087 | narL | two-component system response regulator NarL | insig. | 34 | 99 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS17520 | | response regulator | insig. | 41 | 87 |
| | Pseudomonas sp. S08-1 | OH686_21830 | | Two-component transcriptional response regulator, NarL/FixJ family | insig. | 36 | 99 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS12850 | | LuxR family transcriptional regulator | strong | 34 | 99 |
| | Klebsiella michiganensis M5al | BWI76_RS06060 | | DNA-binding response regulator | sig. | 40 | 100 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01334 | | two component transcriptional regulator, LuxR family | no data | 38 | 99 |
| | Methylophilus sp. DMC18 | GFF57 | | Response regulator UvrY | insig. | 34 | 100 |
| o | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS16950 | | response regulator transcription factor | insig. | 34 | 100 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF304 | | Transcriptional regulatory protein UhpA | insig. | 39 | 96 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_06455 | | DNA-binding response regulator | insig. | 37 | 100 |
| | Pseudomonas sp. BP01 | JOY50_RS02900 | | response regulator transcription factor | no data | 36 | 99 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4833 | | DNA-binding response regulator, LuxR family | sig. | 35 | 99 |
| | Dickeya dianthicola 67-19 | HGI48_RS02840 | | transcriptional regulator UhpA | insig. | 39 | 95 |
| | Paraburkholderia graminis OAS925 | ABIE53_005478 | | two-component system invasion response regulator UvrY | sig. | 38 | 99 |
| | Pseudomonas putida KT2440 | PP_2126 | | DNA-binding response regulator, LuxR family | insig. | 34 | 99 |
| | Pseudomonas putida KT2440 | PP_2672 | | Transcriptional activator protein ExaE | strong | 36 | 99 |
| | Dickeya dadantii 3937 | DDA3937_RS02865 | | transcriptional regulator UhpA | strong | 39 | 95 |
| | Phaeobacter inhibens DSM 17395 | PGA1_c20200 | | two-component signal transduction system, response regulator | strong | 37 | 100 |
| | Dickeya dianthicola ME23 | DZA65_RS03015 | | transcriptional regulator UhpA | insig. | 38 | 95 |
| | Pseudomonas sp. RS175 | PFR28_01811 | | Transcriptional activator protein ExaE | insig. | 37 | 99 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_28065 | | LuxR family transcriptional regulator | strong | 37 | 99 |
| | Pseudomonas sp. SVBP6 | COO64_RS09150 | | response regulator transcription factor | insig. | 35 | 99 |
| | Ralstonia solanacearum GMI1000 | RS_RS11600 | | DNA-binding response regulator | insig. | 35 | 99 |
| | Pseudomonas sp. BP01 | JOY50_RS24990 | | response regulator transcription factor | insig. | 34 | 99 |
| | Klebsiella pneumoniae MRSN742743 | GJGHJB_00037 | uhpA | transcriptional regulator UhpA | insig. | 39 | 95 |
| o | Escherichia coli BL21 | ECD_03553 | | response regulator in two-component regulatory system wtih UhpB | insig. | 39 | 95 |
| | Escherichia fergusonii Becca | EFB2_00029 | | Transcriptional regulatory protein UhpA | insig. | 39 | 95 |
| | Escherichia coli ECOR27 | NOLOHH_07335 | uhpA_G97D | DNA-binding response regulator UhpA | insig. | 39 | 95 |
| | Escherichia coli ECOR38 | HEPCGN_13905 | uhpA_G97D | DNA-binding response regulator UhpA | insig. | 39 | 95 |
| | Escherichia coli ECRC100 | OKFHMN_15180 | uhpA_G97D | DNA-binding response regulator UhpA | insig. | 39 | 95 |
| | Escherichia coli ECRC101 | MCAODC_05690 | uhpA_G97D | DNA-binding response regulator UhpA | insig. | 39 | 95 |
| | Escherichia coli ECRC102 | NIAGMN_12940 | uhpA_G97D | DNA-binding response regulator UhpA | insig. | 39 | 95 |
| | Escherichia coli ECRC62 | BNILDI_04190 | uhpA_G97D | DNA-binding response regulator UhpA | insig. | 39 | 95 |
| | Escherichia coli ECRC98 | JDDGAC_18805 | uhpA_G97D | DNA-binding response regulator UhpA | insig. | 39 | 95 |
| | Escherichia coli ECRC99 | KEDOAH_12965 | uhpA_G97D | DNA-binding response regulator UhpA | no data | 39 | 95 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_00031 | | Transcriptional regulatory protein UhpA | insig. | 39 | 95 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS21160 | | transcriptional regulator UhpA | insig. | 39 | 95 |
| | Escherichia coli BW25113 | b3669 | uhpA | DNA-binding response regulator in two-component regulatory system wtih UhpB (NCBI) | sig. | 39 | 95 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_08505 | | transcriptional regulator UhpA | insig. | 38 | 95 |
| | Pseudomonas protegens RBAN4 | FABNJH_11585 | citB | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains | insig. | 36 | 99 |
| | Enterobacter sp. TBS_079 | MPMX20_00033 | | Transcriptional regulatory protein UhpA | sig. | 38 | 95 |
| o | Lysobacter sp. OAE881 | ABIE51_RS10620 | | response regulator transcription factor | insig. | 35 | 100 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1296 | | DNA-binding response regulator, LuxR family | strong | 34 | 100 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS04120 | | DNA-binding response regulator | insig. | 34 | 99 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1391 | | DNA-binding response regulator, LuxR family | strong | 37 | 99 |
| o | Desulfovibrio vulgaris Miyazaki F | DvMF_1607 | | two component transcriptional regulator, LuxR family (RefSeq) | insig. | 35 | 99 |
| | Ralstonia solanacearum UW163 | UW163_RS09550 | | DNA-binding response regulator | insig. | 34 | 99 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_3952 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | insig. | 39 | 95 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_03787 | | Transcriptional activator protein ExaE | cofit | 39 | 99 |
| | Lysobacter sp. OAE881 | ABIE51_RS16750 | | response regulator transcription factor | cofit | 38 | 97 |
| | Klebsiella michiganensis M5al | BWI76_RS27800 | | DNA-binding response regulator | sig. | 38 | 95 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_25245 | | regulator | strong | 35 | 99 |
| | Escherichia coli ECRC100 | OKFHMN_08705 | citB | DNA-binding response regulator | insig. | 39 | 100 |
| | Escherichia coli ECRC101 | MCAODC_27935 | citB | DNA-binding response regulator | insig. | 39 | 100 |
| | Escherichia coli ECRC102 | NIAGMN_06760 | citB | DNA-binding response regulator | insig. | 39 | 100 |
| | Escherichia coli ECRC98 | JDDGAC_12360 | citB | DNA-binding response regulator | insig. | 39 | 100 |
| | Escherichia coli ECRC99 | KEDOAH_19265 | citB | DNA-binding response regulator | no data | 39 | 100 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13516_RS16795 | uhpA | transcriptional regulator UhpA | insig. | 38 | 95 |
| | Pseudomonas simiae WCS417 | PS417_17470 | | LuxR family transcriptional regulator | insig. | 37 | 99 |
| o | Synechocystis sp000284455 PCC 6803 | SGL_RS15965 | | response regulator transcription factor | insig. | 35 | 99 |
| | Dinoroseobacter shibae DFL-12 | Dshi_2345 | | two component transcriptional regulator, LuxR family (RefSeq) | insig. | 35 | 99 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_24485 | | regulator | insig. | 35 | 99 |
| o | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.2612.1 | | BarA-associated response regulator UvrY (= GacA = SirA) | insig. | 37 | 100 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS30895 | | response regulator transcription factor | insig. | 33 | 99 |
| | Shewanella sp. ANA-3 | Shewana3_1152 | | two component LuxR family transcriptional regulator (RefSeq) | insig. | 36 | 90 |
| | Lysobacter sp. OAE881 | ABIE51_RS11810 | | response regulator | insig. | 37 | 100 |
| o | Azospirillum sp. SherDot2 | MPMX19_03688 | | Response regulator UvrY | insig. | 39 | 99 |
| o | Mycobacterium tuberculosis H37Rv | Rv3133c | | Two component transcriptional regulatory protein DevR (probably LuxR/UhpA-family) | sig. | 35 | 97 |
| o | Xanthobacter sp. DMC5 | GFF464 | | Response regulator UvrY | insig. | 35 | 98 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.3859.1 | | Two-component system regulatory protein | sig. | 37 | 92 |
| | Pseudomonas orientalis W4I3 | QF045_RS21775 | | response regulator transcription factor | insig. | 32 | 98 |