Homologs of ABI39_RS08190 from Phocaeicola dorei CL03T12C01

HD domain-containing protein
SEED: tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Phocaeicola dorei CL03T12C01 ABI39_RS08190 HD domain-containing protein no data 100 100
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS00570 HD domain-containing protein no data 99 97
o Bacteroides ovatus ATCC 8483 BACOVA_00695 tRNA nucleotidyltransferase/poly(A) polymerase family protein no data 85 94
o Bacteroides thetaiotaomicron VPI-5482 BT1975 tRNA nucleotidyltransferase (NCBI ptt file) no data 84 94
o Bacteroides stercoris CC31F HMPREF1181_RS08045 HD domain-containing protein no data 84 93
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS16615 HD domain-containing protein no data 74 93
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS02970 tRNA nucleotidyltransferase no data 62 94
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS17460 CCA tRNA nucleotidyltransferase no data 60 94
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2403 tRNA nucleotidyltransferase/poly(A) polymerase no data 61 92
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_11040 tRNA nucleotidyltransferase no data 58 94
o Bifidobacterium breve UCC2003 BBR_RS20435 CCA tRNA nucleotidyltransferase strong 37 88
o Mycobacterium tuberculosis H37Rv Rv3907c Probable poly(A) polymerase PcnA (polynucleotide adenylyltransferase) (NTP polymerase) (RNA adenylating enzyme) (poly(A) polymerase) no data 34 89
o Fusobacterium nucleatum SB010 HUW76_08405 CCA tRNA nucleotidyltransferase strong 29 87
  Ralstonia solanacearum GMI1000 RS_RS00430 multifunctional tRNA nucleotidyltransferase/2',3'-cyclic phosphodiesterase/2' nucleotidase/2'phosphatase no data 36 61
  Ralstonia solanacearum PSI07 RPSI07_RS23525 multifunctional CCA addition/repair protein cofit 35 61
o Shewanella amazonensis SB2B Sama_0834 polynucleotide adenylyltransferase region (RefSeq) no data 30 83
  Pseudomonas sp. S08-1 OH686_15005 CCA tRNA nucleotidyltransferase no data 36 60
  Escherichia fergusonii Becca EFB2_00755 Multifunctional CCA protein no data 33 71
  Escherichia coli Nissle 1917 ECOLIN_RS17650 fused tRNA nucleotidyltransferase/2',3'-cyclic phosphodiesterase/2' nucleotidase/phosphatase Cca no data 35 63
  Escherichia coli ECRC62 BNILDI_01015 cca fused tRNA nucleotidyltransferase/2',3'-cyclic phosphodiesterase/2' nucleotidase/phosphatase Cca no data 33 71
  Escherichia coli ECOR27 NOLOHH_10500 cca fused tRNA nucleotidyltransferase/2',3'-cyclic phosphodiesterase/2' nucleotidase/phosphatase Cca no data 33 71
  Escherichia coli BL21 ECD_02926 fused tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase and phosphatase no data 33 71
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00648 Multifunctional CCA protein no data 33 71
  Escherichia coli BW25113 b3056 cca fused tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase and phosphatase (NCBI) no data 33 71
  Escherichia coli ECOR38 HEPCGN_17570 cca fused tRNA nucleotidyltransferase/2',3'-cyclic phosphodiesterase/2' nucleotidase/phosphatase Cca no data 33 71
  Kangiella aquimarina DSM 16071 B158DRAFT_0834 tRNA nucleotidyltransferase/poly(A) polymerase no data 34 71
  Shewanella sp. ANA-3 Shewana3_3076 metal dependent phosphohydrolase (RefSeq) no data 31 71
  Escherichia coli ECRC100 OKFHMN_18715 cca fused tRNA nucleotidyltransferase/2',3'-cyclic phosphodiesterase/2' nucleotidase/phosphatase Cca no data 33 71
  Escherichia coli ECRC101 MCAODC_09230 cca fused tRNA nucleotidyltransferase/2',3'-cyclic phosphodiesterase/2' nucleotidase/phosphatase Cca no data 33 71
  Escherichia coli ECRC102 NIAGMN_16480 cca fused tRNA nucleotidyltransferase/2',3'-cyclic phosphodiesterase/2' nucleotidase/phosphatase Cca no data 33 71
  Escherichia coli ECRC98 JDDGAC_22350 cca fused tRNA nucleotidyltransferase/2',3'-cyclic phosphodiesterase/2' nucleotidase/phosphatase Cca no data 33 71
  Escherichia coli ECRC99 KEDOAH_09430 cca fused tRNA nucleotidyltransferase/2',3'-cyclic phosphodiesterase/2' nucleotidase/phosphatase Cca no data 33 71
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS09845 multifunctional CCA addition/repair protein insig. 34 61
  Ralstonia solanacearum UW163 UW163_RS03735 multifunctional CCA addition/repair protein no data 34 61
  Dickeya dadantii 3937 DDA3937_RS17120 multifunctional CCA addition/repair protein no data 33 60
  Herbaspirillum seropedicae SmR1 HSERO_RS21400 tRNA nucleotidyl transferase no data 34 60
  Dickeya dianthicola 67-19 HGI48_RS17170 multifunctional CCA addition/repair protein no data 33 60
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4798 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) no data 35 60
  Pseudomonas fluorescens FW300-N2E3 AO353_07350 2', 3'-cyclic nucleotide 2'-phosphodiesterase no data 35 60
  Ralstonia sp. UNC404CL21Col ABZR87_RS04900 multifunctional CCA addition/repair protein no data 35 54
  Dickeya dianthicola ME23 DZA65_RS18255 multifunctional CCA addition/repair protein no data 33 60
  Pseudomonas sp. RS175 PFR28_04071 Multifunctional CCA protein insig. 36 60
  Serratia liquefaciens MT49 IAI46_22075 multifunctional CCA addition/repair protein no data 31 73
  Pseudomonas fluorescens FW300-N2C3 AO356_14300 2', 3'-cyclic nucleotide 2'-phosphodiesterase no data 35 60
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3170 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) no data 32 71
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2520 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) no data 35 60
  Erwinia tracheiphila SCR3 LU632_RS20690 multifunctional CCA addition/repair protein no data 34 60
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1193 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) no data 30 80
  Desulfovibrio vulgaris Hildenborough JW710 DVU1653 polyA polymerase family protein (TIGR) strong 36 44
  Klebsiella michiganensis M5al BWI76_RS24475 multifunctional CCA tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase no data 33 64
  Rahnella sp. WP5 EX31_RS08160 multifunctional CCA addition/repair protein no data 31 73
  Enterobacter sp. TBS_079 MPMX20_03893 Multifunctional CCA protein no data 33 65
  Enterobacter asburiae PDN3 EX28DRAFT_3084 tRNA nucleotidyltransferase/poly(A) polymerase no data 33 65
  Pantoea sp. MT58 IAI47_03085 multifunctional CCA addition/repair protein no data 33 60
  Vibrio cholerae E7946 ATCC 55056 CSW01_12385 multifunctional CCA tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase insig. 30 70
  Cupriavidus basilensis FW507-4G11 RR42_RS01420 2', 3'-cyclic nucleotide 2'-phosphodiesterase insig. 35 54
  Pseudomonas syringae pv. syringae B728a Psyr_4634 Polynucleotide adenylyltransferase:Metal-dependent phosphohydrolase, HD subdomain protein insig. 33 60
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4634 Polynucleotide adenylyltransferase:Metal-dependent phosphohydrolase, HD subdomain protein insig. 33 60
  Paraburkholderia sabiae LMG 24235 QEN71_RS28620 multifunctional CCA addition/repair protein insig. 34 54
  Pectobacterium carotovorum WPP14 HER17_RS04020 multifunctional CCA addition/repair protein no data 33 60
  Dechlorosoma suillum PS Dsui_0686 tRNA nucleotidyltransferase/poly(A) polymerase no data 31 73
  Burkholderia phytofirmans PsJN BPHYT_RS18595 multifunctional CCA protein no data 34 54
  Shewanella loihica PV-4 Shew_1008 metal dependent phosphohydrolase (RefSeq) no data 29 73
  Acidovorax sp. GW101-3H11 Ac3H11_1829 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) no data 29 70
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.960.1 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) no data 31 74
  Pseudomonas simiae WCS417 PS417_25845 2', 3'-cyclic nucleotide 2'-phosphodiesterase no data 35 60
  Pseudomonas fluorescens SBW25 PFLU_RS27500 multifunctional CCA addition/repair protein no data 35 60
  Pseudomonas fluorescens SBW25-INTG PFLU_RS27500 multifunctional CCA addition/repair protein no data 35 60
  Paraburkholderia graminis OAS925 ABIE53_000041 tRNA nucleotidyltransferase (CCA-adding enzyme) no data 33 54
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05819 tRNA nucleotidyltransferase (CCA-adding enzyme) insig. 33 54
  Acinetobacter radioresistens SK82 MPMX26_00999 Multifunctional CCA protein no data 33 54
  Variovorax sp. SCN45 GFF5159 CCA tRNA nucleotidyltransferase (EC 2.7.7.72) no data 32 54
  Pseudomonas stutzeri RCH2 Psest_3675 tRNA nucleotidyltransferase/poly(A) polymerase no data 33 53
  Synechococcus elongatus PCC 7942 Synpcc7942_0976 CBS no data 38 36
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS12755 multifunctional CCA addition/repair protein no data 35 54
  Pseudomonas putida KT2440 PP_0394 tRNA nucleotidyltransferase - 2',3'-cyclic phosphodiesterase - 2' nucleotidase and phosphatase no data 33 53
  Variovorax sp. OAS795 ABID97_RS06580 multifunctional CCA addition/repair protein no data 32 54
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1621 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) no data 35 53
  Synechococcus elongatus PCC 7942 Synpcc7942_0791 pcnB polyA polymerase no data 33 48
  Lysobacter sp. OAE881 ABIE51_RS08015 polynucleotide adenylyltransferase PcnB cofit 31 44
  Rhodanobacter sp. FW510-T8 OKGIIK_16370 multifunctional CCA addition/repair protein no data 34 63
  Serratia liquefaciens MT49 IAI46_21220 polynucleotide adenylyltransferase PcnB cofit 31 44
  Castellaniella sp019104865 MT123 ABCV34_RS13565 tRNA CCA-pyrophosphorylase no data 36 44
  Marinobacter adhaerens HP15 HP15_2994 polynucleotide adenylyltransferase/metal dependent phosphohydrolase no data 36 44
  Lysobacter sp. OAE881 ABIE51_RS19085 multifunctional CCA addition/repair protein no data 31 70
  Pseudomonas stutzeri RCH2 Psest_0998 poly(A) polymerase strong 30 48
  Rhodanobacter denitrificans MT42 LRK55_RS14820 polynucleotide adenylyltransferase PcnB strong 32 44
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS15105 polynucleotide adenylyltransferase PcnB strong 32 44
  Pantoea sp. MT58 IAI47_15645 polynucleotide adenylyltransferase PcnB strong 29 51
  Rhodanobacter denitrificans MT42 LRK55_RS07010 multifunctional CCA addition/repair protein no data 36 57
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS07280 multifunctional CCA addition/repair protein no data 36 57
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS05300 polynucleotide adenylyltransferase PcnB strong 31 46
  Ralstonia solanacearum PSI07 RPSI07_RS12000 polynucleotide adenylyltransferase PcnB strong 31 46
  Cupriavidus basilensis FW507-4G11 RR42_RS17235 poly(A) polymerase strong 31 46
  Dickeya dianthicola ME23 DZA65_RS17145 polynucleotide adenylyltransferase PcnB sig. 30 43
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF89 Poly(A) polymerase (EC 2.7.7.19) sig. 29 52
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3054.1 Poly(A) polymerase (EC 2.7.7.19) insig. 32 44
  Shewanella oneidensis MR-1 SO0872 pcnB polyA polymerase (NCBI ptt file) strong 31 52
  Alteromonas macleodii MIT1002 MIT1002_03692 Poly(A) polymerase I precursor strong 31 44
  Ralstonia solanacearum GMI1000 RS_RS13165 polynucleotide adenylyltransferase PcnB strong 31 46