Homologs of DvMF_1124 from Desulfovibrio vulgaris Miyazaki F

radical SAM domain protein (RefSeq)
SEED: Queuosine Biosynthesis QueE Radical SAM

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Desulfovibrio vulgaris Miyazaki F DvMF_1124 radical SAM domain protein (RefSeq) insig. 100 100
o Desulfovibrio vulgaris Hildenborough JW710 DVU2658 conserved hypothetical protein (TIGR) sig. 70 100
o Magnetospirillum magneticum AMB-1 AMB_RS01255 7-carboxy-7-deazaguanine synthase insig. 59 100
o Ralstonia sp. UNC404CL21Col ABZR87_RS12145 7-carboxy-7-deazaguanine synthase strong 57 100
o Rhodopseudomonas palustris CGA009 TX73_006110 7-carboxy-7-deazaguanine synthase insig. 57 100
o Cupriavidus basilensis FW507-4G11 RR42_RS11390 7-cyano-7-deazaguanine reductase no data 56 100
o Ralstonia solanacearum PSI07 RPSI07_RS16890 7-carboxy-7-deazaguanine synthase no data 56 100
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02231 7-carboxy-7-deazaguanine synthase, Cx14CxxC type cofit 52 100
o Xanthobacter sp. DMC5 GFF3476 7-carboxy-7-deazaguanine synthase no data 58 100
o Paraburkholderia graminis OAS925 ABIE53_000397 7-carboxy-7-deazaguanine synthase strong 53 100
o Ralstonia solanacearum GMI1000 RS_RS07295 7-carboxy-7-deazaguanine synthase sig. 57 100
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS00615 7-carboxy-7-deazaguanine synthase no data 56 100
o Ralstonia solanacearum UW163 UW163_RS13945 7-carboxy-7-deazaguanine synthase no data 56 100
o Herbaspirillum seropedicae SmR1 HSERO_RS11035 7-cyano-7-deazaguanine reductase sig. 53 100
o Caulobacter crescentus NA1000 CCNA_03261 queuosine biosynthesis protein QueE strong 57 100
o Caulobacter crescentus NA1000 Δfur CCNA_03261 queuosine biosynthesis protein QueE cofit 57 100
o Paraburkholderia sabiae LMG 24235 QEN71_RS00205 7-carboxy-7-deazaguanine synthase insig. 52 100
o Burkholderia phytofirmans PsJN BPHYT_RS01505 7-cyano-7-deazaguanine reductase sig. 52 100
o Sphingomonas koreensis DSMZ 15582 Ga0059261_3210 Organic radical activating enzymes insig. 54 100
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4633 Queuosine Biosynthesis QueE Radical SAM insig. 52 100
o Marinobacter adhaerens HP15 HP15_3815 organic radical activating enzyme strong 52 99
o Acidovorax sp. GW101-3H11 Ac3H11_3825 Queuosine Biosynthesis QueE Radical SAM no data 54 100
o Variovorax sp. OAS795 ABID97_RS07425 7-carboxy-7-deazaguanine synthase no data 52 100
o Sphingobium sp. HT1-2 GFF3750 7-carboxy-7-deazaguanine synthase (EC 4.3.99.3) cofit 54 100
  Magnetospirillum magneticum AMB-1 AMB_RS18645 7-carboxy-7-deazaguanine synthase cofit 51 100
o Variovorax sp. SCN45 GFF2577 7-carboxy-7-deazaguanine synthase (EC 4.3.99.3) no data 51 100
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS08695 7-carboxy-7-deazaguanine synthase no data 48 100
o Bacteroides ovatus ATCC 8483 BACOVA_05261 radical SAM domain protein insig. 40 99
o Bacteroides thetaiotaomicron VPI-5482 BT4454 conserved hypothetical protein (NCBI ptt file) insig. 40 100
o Bacteroides stercoris CC31F HMPREF1181_RS13885 radical SAM protein insig. 40 99
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14880 radical SAM protein insig. 38 98
o Phocaeicola dorei CL03T12C01 ABI39_RS10600 radical SAM protein insig. 38 98
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS00750 radical SAM protein insig. 40 98
  Bacteroides stercoris CC31F HMPREF1181_RS07295 radical SAM protein insig. 34 99
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_6008 Queuosine Biosynthesis QueE Radical SAM no data 45 54
o Pantoea sp. MT58 IAI47_04140 7-carboxy-7-deazaguanine synthase QueE insig. 35 100
o Synechococcus elongatus PCC 7942 Synpcc7942_1332 hypothetical protein strong 35 98
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS16825 7-carboxy-7-deazaguanine synthase QueE insig. 35 100
o Erwinia amylovora T8 OLJFJH_09270 7-carboxy-7-deazaguanine synthase QueE insig. 33 100
o Vibrio cholerae E7946 ATCC 55056 CSW01_06870 7-carboxy-7-deazaguanine synthase QueE insig. 30 99
o Synechocystis sp000284455 PCC 6803 SGL_RS07750 7-carboxy-7-deazaguanine synthase QueE strong 32 100
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_17410 queE 7-carboxy-7-deazaguanine synthase QueE insig. 31 100
o Erwinia tracheiphila SCR3 LU632_RS06390 queE 7-carboxy-7-deazaguanine synthase QueE insig. 31 100
o Shewanella sp. ANA-3 Shewana3_2163 radical activating enzyme (RefSeq) insig. 31 100
o Alteromonas macleodii MIT1002 MIT1002_01264 7-carboxy-7-deazaguanine synthase strong 30 99
o Enterobacter sp. TBS_079 MPMX20_03645 7-carboxy-7-deazaguanine synthase sig. 32 100
o Enterobacter asburiae PDN3 EX28DRAFT_2855 putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE insig. 31 100
o Rahnella sp. WP5 EX31_RS07920 7-carboxy-7-deazaguanine synthase QueE insig. 31 100
o Klebsiella pneumoniae MKP103 KDGMDA_03310 7-carboxy-7-deazaguanine synthase QueE insig. 32 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4831 Queuosine Biosynthesis QueE Radical SAM insig. 31 100
o Escherichia coli ECOR27 NOLOHH_12170 queE 7-carboxy-7-deazaguanine synthase QueE insig. 32 100
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS09380 7-carboxy-7-deazaguanine synthase QueE cofit 29 98
o Escherichia coli BL21 ECD_02622 7-carboxy-7-deazaguanine synthase; queosine biosynthesis insig. 32 100
o Escherichia coli ECRC100 OKFHMN_20300 queE 7-carboxy-7-deazaguanine synthase QueE cofit 32 100
o Escherichia coli ECRC101 MCAODC_10825 queE 7-carboxy-7-deazaguanine synthase QueE insig. 32 100
o Escherichia coli ECRC102 NIAGMN_18070 queE 7-carboxy-7-deazaguanine synthase QueE insig. 32 100
o Escherichia coli ECRC62 BNILDI_10675 queE 7-carboxy-7-deazaguanine synthase QueE cofit 32 100
o Escherichia coli ECRC98 JDDGAC_23965 queE 7-carboxy-7-deazaguanine synthase QueE insig. 32 100
o Escherichia coli ECRC99 KEDOAH_07830 queE 7-carboxy-7-deazaguanine synthase QueE no data 32 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00957 7-carboxy-7-deazaguanine synthase insig. 32 100
o Escherichia coli BW25113 b2777 ygcF hypothetical protein (NCBI) insig. 32 100
o Shewanella oneidensis MR-1 SO2501 radical activating enzyme (NCBI ptt file) insig. 31 100
o Escherichia fergusonii Becca EFB2_01141 7-carboxy-7-deazaguanine synthase insig. 32 100
o Escherichia coli ECOR38 HEPCGN_19205 queE 7-carboxy-7-deazaguanine synthase QueE insig. 32 100
o Escherichia coli Nissle 1917 ECOLIN_RS15475 7-carboxy-7-deazaguanine synthase QueE strong 32 100
o Klebsiella michiganensis M5al BWI76_RS22780 7-carboxy-7-deazaguanine synthase QueE insig. 31 100
o Shewanella loihica PV-4 Shew_2061 radical SAM domain-containing protein (RefSeq) insig. 32 100
o Serratia liquefaciens MT49 IAI46_03675 7-carboxy-7-deazaguanine synthase QueE insig. 32 100
o Pectobacterium carotovorum WPP14 HER17_RS04200 7-carboxy-7-deazaguanine synthase QueE insig. 31 100
o Dickeya dadantii 3937 DDA3937_RS16970 7-carboxy-7-deazaguanine synthase QueE insig. 30 100
o Shewanella amazonensis SB2B Sama_1825 radical activating enzyme (RefSeq) insig. 30 99
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_07135 7-carboxy-7-deazaguanine synthase QueE strong 28 97
o Dickeya dianthicola 67-19 HGI48_RS17035 7-carboxy-7-deazaguanine synthase QueE insig. 32 100
o Dickeya dianthicola ME23 DZA65_RS18110 7-carboxy-7-deazaguanine synthase QueE insig. 32 100
o Rhodospirillum rubrum S1H Rru_A1959 Radical SAM (NCBI) insig. 32 98
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS08930 7-carboxy-7-deazaguanine synthase QueE strong 25 97
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4642 Organic radical activating enzymes sig. 27 98
  Cellulophaga baltica 18 M666_RS00760 7-carboxy-7-deazaguanine synthase QueE insig. 27 97
  Paraburkholderia sabiae LMG 24235 QEN71_RS41925 7-carboxy-7-deazaguanine synthase QueE insig. 31 100
o Azospirillum brasilense Sp245 AZOBR_RS04155 radical SAM protein insig. 30 98
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5545 Queuosine Biosynthesis QueE Radical SAM strong 29 97
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_629 Queuosine Biosynthesis QueE Radical SAM insig. 29 97
o Pseudomonas lactucae CFBP13502 GEMAOFIL_04633 7-carboxy-7-deazaguanine synthase cofit 27 97
o Pseudomonas fluorescens FW300-N2C3 AO356_18065 7-carboxy-7-deazaguanine synthase insig. 29 97
  Acinetobacter radioresistens SK82 MPMX26_02174 7-carboxy-7-deazaguanine synthase strong 34 65
o Pseudomonas fluorescens FW300-N2E3 AO353_03540 7-carboxy-7-deazaguanine synthase insig. 29 97
o Pseudomonas sp. RS175 PFR28_03404 7-carboxy-7-deazaguanine synthase sig. 29 97
  Pseudomonas simiae WCS417 PS417_22405 7-carboxy-7-deazaguanine synthase sig. 28 97
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1861 Queuosine Biosynthesis QueE Radical SAM insig. 27 97
  Methylophilus sp. DMC18 GFF2335 7-carboxy-7-deazaguanine synthase no data 26 97
o Pseudomonas sp. DMC3 GFF5176 7-carboxy-7-deazaguanine synthase cofit 29 97
  Pseudomonas segetis P6 MPMX49_01693 7-carboxy-7-deazaguanine synthase insig. 28 97
  Pseudomonas syringae pv. syringae B728a Psyr_1418 Radical SAM insig. 32 58
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1418 Radical SAM no data 32 58
  Pseudomonas fluorescens SBW25 PFLU_RS24045 7-carboxy-7-deazaguanine synthase QueE insig. 27 97
  Pseudomonas fluorescens SBW25-INTG PFLU_RS24045 7-carboxy-7-deazaguanine synthase QueE sig. 27 97
  Acinetobacter baumannii LAC-4 RR41_RS04755 7-carboxy-7-deazaguanine synthase QueE strong 30 82
  Pseudomonas stutzeri RCH2 Psest_1505 Organic radical activating enzymes sig. 32 58
  Pseudomonas sp. BP01 JOY50_RS01775 queE 7-carboxy-7-deazaguanine synthase QueE insig. 30 68
  Pseudomonas sp. SVBP6 COO64_RS20140 queE 7-carboxy-7-deazaguanine synthase QueE insig. 27 72