Homologs of Shew_2224 from Shewanella loihica PV-4

DNA topoisomerase I (RefSeq)
SEED: DNA topoisomerase I (EC 5.99.1.2)
KEGG: DNA topoisomerase I

Top 100 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth Species Gene Name Description Fitness %Id Cov
  Shewanella loihica PV-4 Shew_2224 DNA topoisomerase I (RefSeq) no data 100 100
o Shewanella sp. ANA-3 Shewana3_1729 DNA topoisomerase I (RefSeq) no data 84 100
o Shewanella oneidensis MR-1 SO2705 topA DNA topoisomerase I (NCBI ptt file) no data 84 98
o Shewanella amazonensis SB2B Sama_1322 DNA topoisomerase I (RefSeq) no data 83 97
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2714 DNA topoisomerase I (EC 5.99.1.2) no data 72 97
o Escherichia coli BL21 ECD_01250 DNA topoisomerase I, omega subunit strong 71 97
o Escherichia fergusonii Becca EFB2_02653 DNA topoisomerase 1 strong 71 97
o Escherichia coli ECOR27 NOLOHH_20270 type I DNA topoisomerase no data 71 97
o Escherichia coli ECOR38 HEPCGN_25595 type I DNA topoisomerase strong 71 97
o Escherichia coli ECRC100 OKFHMN_02605 type I DNA topoisomerase no data 71 97
o Escherichia coli ECRC101 MCAODC_15660 type I DNA topoisomerase no data 71 97
o Escherichia coli ECRC102 NIAGMN_26775 type I DNA topoisomerase no data 71 97
o Escherichia coli ECRC98 JDDGAC_05150 type I DNA topoisomerase no data 71 97
o Escherichia coli ECRC99 KEDOAH_26160 type I DNA topoisomerase no data 71 97
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02410 DNA topoisomerase 1 strong 71 97
o Escherichia coli Nissle 1917 ECOLIN_RS07675 type I DNA topoisomerase no data 71 97
o Escherichia coli BW25113 b1274 topA DNA topoisomerase I (NCBI) no data 71 97
o Escherichia coli ECRC62 BNILDI_18420 type I DNA topoisomerase insig. 71 97
o Enterobacter sp. TBS_079 MPMX20_02502 DNA topoisomerase 1 no data 72 97
o Dickeya dadantii 3937 DDA3937_RS10535 type I DNA topoisomerase no data 70 97
o Enterobacter asburiae PDN3 EX28DRAFT_0945 DNA topoisomerase I, bacterial no data 71 97
o Pectobacterium carotovorum WPP14 HER17_RS10875 type I DNA topoisomerase no data 70 97
o Klebsiella pneumoniae MKP103 KDGMDA_19615 type I DNA topoisomerase strong 71 97
o Klebsiella michiganensis M5al BWI76_RS11925 DNA topoisomerase I no data 71 97
o Alteromonas macleodii MIT1002 MIT1002_01705 DNA topoisomerase 1 no data 71 97
o Serratia liquefaciens MT49 IAI46_13970 type I DNA topoisomerase sig. 71 97
o Rahnella sp. WP5 EX31_RS09895 type I DNA topoisomerase cofit 71 97
o Dickeya dianthicola 67-19 HGI48_RS10535 type I DNA topoisomerase no data 70 97
o Dickeya dianthicola ME23 DZA65_RS11015 type I DNA topoisomerase no data 70 97
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS06950 type I DNA topoisomerase no data 70 97
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_23715 type I DNA topoisomerase no data 69 98
o Erwinia tracheiphila SCR3 LU632_RS12555 topA type I DNA topoisomerase no data 69 98
o Pantoea sp. MT58 IAI47_09235 type I DNA topoisomerase insig. 70 97
o Erwinia amylovora T8 OLJFJH_13525 type I DNA topoisomerase no data 70 97
o Pseudomonas sp. RS175 PFR28_01113 DNA topoisomerase 1 strong 67 97
o Pseudomonas aeruginosa PA14 IKLFDK_15320 type I DNA topoisomerase no data 68 97
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2287 DNA topoisomerase I (EC 5.99.1.2) no data 67 97
o Vibrio cholerae E7946 ATCC 55056 CSW01_08695 DNA topoisomerase 1 no data 68 97
o Pseudomonas fluorescens FW300-N2C3 AO356_02315 DNA topoisomerase I strong 67 97
o Pseudomonas stutzeri RCH2 Psest_2651 DNA topoisomerase I, bacterial strong 67 97
o Pseudomonas sp. DMC3 GFF1274 DNA topoisomerase 1 no data 67 98
o Pseudomonas sp. BP01 JOY50_RS25050 topA type I DNA topoisomerase no data 67 97
o Pseudomonas putida KT2440 PP_2139 DNA topoisomerase I no data 67 97
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4038 DNA topoisomerase I (EC 5.99.1.2) strong 67 98
o Pseudomonas simiae WCS417 PS417_07590 DNA topoisomerase I no data 67 97
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3906 DNA topoisomerase I (EC 5.99.1.2) strong 67 98
o Pseudomonas fluorescens FW300-N2E3 AO353_00495 DNA topoisomerase I strong 67 97
o Pseudomonas segetis P6 MPMX49_02992 DNA topoisomerase 1 no data 68 97
o Pseudomonas lactucae CFBP13502 GEMAOFIL_01650 DNA topoisomerase 1 no data 67 97
o Pseudomonas fluorescens SBW25 PFLU_RS07665 type I DNA topoisomerase strong 67 97
o Pseudomonas fluorescens SBW25-INTG PFLU_RS07665 type I DNA topoisomerase strong 67 97
o Pseudomonas sp. S08-1 OH686_21940 DNA topoisomerase I no data 67 97
o Pseudomonas syringae pv. syringae B728a Psyr_3287 DNA topoisomerase I strong 66 97
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3287 DNA topoisomerase I no data 66 97
o Pseudomonas sp. SVBP6 COO64_RS09410 topA type I DNA topoisomerase strong 67 97
o Kangiella aquimarina DSM 16071 B158DRAFT_2227 DNA topoisomerase I, bacterial strong 65 97
o Marinobacter adhaerens HP15 HP15_1514 DNA topoisomerase I no data 65 97
o Acinetobacter radioresistens SK82 MPMX26_00365 DNA topoisomerase 1 no data 64 96
o Acinetobacter baumannii LAC-4 RR41_RS16785 type I DNA topoisomerase no data 63 97
o Desulfovibrio vulgaris Miyazaki F DvMF_2069 DNA topoisomerase I (RefSeq) no data 39 89
o Desulfovibrio vulgaris Hildenborough JW710 DVU3389 topA DNA topoisomerase I (TIGR) no data 38 89
  Methylophilus sp. DMC18 GFF1540 DNA topoisomerase 1 no data 43 71
  Cellulophaga baltica 18 M666_RS02295 type I DNA topoisomerase no data 42 70
  Azospirillum sp. SherDot2 MPMX19_01509 DNA topoisomerase 1 no data 41 70
  Sphingobium sp. HT1-2 GFF115 DNA topoisomerase I (EC 5.99.1.2) no data 40 71
o Phocaeicola dorei CL03T12C01 ABI39_RS04700 type I DNA topoisomerase strong 38 82
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS12100 type I DNA topoisomerase no data 38 82
  Rhodospirillum rubrum S1H Rru_A3202 DNA topoisomerase (NCBI) strong 40 72
  Azospirillum brasilense Sp245 AZOBR_RS15890 DNA topoisomerase I strong 40 70
  Dinoroseobacter shibae DFL-12 Dshi_1137 DNA topoisomerase I (RefSeq) no data 38 72
  Rhodanobacter sp. FW510-T8 OKGIIK_13765 topA DNA topoisomerase I no data 42 70
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4752.1 DNA topoisomerase I (EC 5.99.1.2) insig. 41 73
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3133 DNA topoisomerase I, bacterial no data 42 69
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2450 DNA topoisomerase I, bacterial no data 40 72
  Caulobacter crescentus NA1000 CCNA_02535 DNA topoisomerase I insig. 40 73
  Caulobacter crescentus NA1000 Δfur CCNA_02535 DNA topoisomerase I no data 40 73
o Rhodanobacter denitrificans MT42 LRK55_RS09790 DNA topoisomerase I no data 38 86
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS10150 DNA topoisomerase I strong 38 86
  Lysobacter sp. OAE881 ABIE51_RS02220 DNA topoisomerase I strong 41 70
  Rhodopseudomonas palustris CGA009 TX73_016155 type I DNA topoisomerase strong 38 70
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS05015 type I DNA topoisomerase no data 40 70
  Phaeobacter inhibens DSM 17395 PGA1_c06220 DNA topoisomerase TopA no data 38 70
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS07115 DNA topoisomerase I no data 42 65
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_07630 DNA topoisomerase I no data 41 65
  Xanthobacter sp. DMC5 GFF934 DNA topoisomerase 1 no data 39 71
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS02930 DNA topoisomerase I no data 38 86
  Sinorhizobium meliloti 1021 SMc01364 DNA topoisomerase I insig. 37 74
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS13865 DNA topoisomerase I sig. 36 86
  Magnetospirillum magneticum AMB-1 AMB_RS03505 type I DNA topoisomerase no data 39 71
o Fusobacterium nucleatum SB010 HUW76_06805 type I DNA topoisomerase no data 34 83
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS04230 type I DNA topoisomerase no data 39 73
  Rhizobium sp. OAE497 ABIE40_RS07355 type I DNA topoisomerase sig. 37 74
  Agrobacterium fabrum C58 Atu1304 DNA topoisomerase I no data 37 73
  Bacteroides stercoris CC31F HMPREF1181_RS01095 type I DNA topoisomerase strong 39 70
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS11640 type I DNA topoisomerase no data 40 69
  Bosea sp. OAE506 ABIE41_RS17240 type I DNA topoisomerase no data 38 71
  Mycobacterium tuberculosis H37Rv Rv3646c DNA topoisomerase I TopA (omega-protein) (relaxing enzyme) (untwisting enzyme) (swivelase) (type I DNA topoisomerase) (nicking-closing enzyme) (TOPO I) no data 40 72
  Synechocystis sp000284455 PCC 6803 SGL_RS08530 type I DNA topoisomerase no data 42 64
  Bacteroides ovatus ATCC 8483 BACOVA_02074 DNA topoisomerase I cofit 40 65
  Bacteroides thetaiotaomicron VPI-5482 BT2827 DNA topoisomerase I (NCBI ptt file) no data 38 69