Homologs of Shew_0951 from Shewanella loihica PV-4

response regulator receiver modulated diguanylate phosphodiesterase (RefSeq)
SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella loihica PV-4 Shew_0951 response regulator receiver modulated diguanylate phosphodiesterase (RefSeq) insig. 100 100
o Shewanella amazonensis SB2B Sama_0809 putative diguanylate phosphodiesterase (RefSeq) insig. 57 99
  Shewanella amazonensis SB2B Sama_2580 putative diguanylate phosphodiesterase (RefSeq) insig. 32 97
o Herbaspirillum seropedicae SmR1 HSERO_RS03135 diguanylate cyclase sig. 31 98
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1770.1 hypothetical protein insig. 29 97
  Rhodospirillum rubrum S1H Rru_A3494 Putative diguanylate phosphodiesterase (EAL domain) with Response Regulator Receiver modulation (NCBI) insig. 30 91
  Vibrio cholerae E7946 ATCC 55056 CSW01_08305 diguanylate phosphodiesterase insig. 30 96
  Methylophilus sp. DMC18 GFF1835 Regulator of RpoS cofit 31 98
o Magnetospirillum magneticum AMB-1 AMB_RS10945 diguanylate phosphodiesterase insig. 29 94
  Alteromonas macleodii MIT1002 MIT1002_04215 Bacteriophytochrome cph2 insig. 30 86
  Caulobacter crescentus NA1000 CCNA_00089 MHYT/PAS-family GGDEF/EAL protein cofit 35 62
  Caulobacter crescentus NA1000 Δfur CCNA_00089 MHYT/PAS-family GGDEF/EAL protein cofit 35 62
  Marinobacter adhaerens HP15 HP15_1415 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) insig. 33 66
  Pseudomonas aeruginosa MRSN321 DY961_RS13125 rocR;inference=COORDINATES two-component system response regulator cyclic di-GMP-specific phosphodiesterase RocR insig. 28 89
  Pseudomonas aeruginosa PA14 IKLFDK_20360 two-component system response regulator cyclic di-GMP-specific phosphodiesterase RocR insig. 28 89
  Pseudomonas aeruginosa PUPa3 DQ20_RS48445 rocR;inference=COORDINATES two-component system response regulator cyclic di-GMP-specific phosphodiesterase RocR insig. 28 89
  Rhodopseudomonas palustris CGA009 TX73_008635 EAL domain-containing response regulator insig. 30 85
o Pseudomonas sp. SVBP6 COO64_RS04950 EAL domain-containing protein insig. 28 98
  Magnetospirillum magneticum AMB-1 AMB_RS16740 diguanylate phosphodiesterase insig. 29 86
o Pseudomonas syringae pv. syringae B728a Psyr_1293 EAL:Response regulator receiver insig. 28 97
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1293 EAL:Response regulator receiver insig. 28 97
  Dechlorosoma suillum PS Dsui_0262 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 32 63
  Rhodospirillum rubrum S1H Rru_A3560 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) insig. 31 64
  Shewanella sp. ANA-3 Shewana3_4029 diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(s) (RefSeq) cofit 34 62
  Pseudomonas sp. RS175 PFR28_01497 Sensor histidine kinase RcsC insig. 28 96
  Paraburkholderia sabiae LMG 24235 QEN71_RS02090 EAL domain-containing protein insig. 34 58
  Herbaspirillum seropedicae SmR1 HSERO_RS13620 diguanylate cyclase strong 32 63
  Rhodopseudomonas palustris CGA009 TX73_002030 EAL domain-containing protein insig. 33 61
  Pseudomonas fluorescens FW300-N2E3 AO353_18200 diguanylate phosphodiesterase insig. 26 96
  Acidovorax sp. GW101-3H11 Ac3H11_1143 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) sig. 31 62
  Pseudomonas sp. SVBP6 COO64_RS26085 EAL domain-containing protein insig. 28 94
o Pseudomonas fluorescens SBW25 PFLU_RS07895 EAL domain-containing protein insig. 27 94
o Pseudomonas fluorescens SBW25-INTG PFLU_RS07895 EAL domain-containing protein sig. 27 94
  Pantoea sp. MT58 IAI47_11105 bifunctional diguanylate cyclase/phosphodiesterase insig. 34 60
  Magnetospirillum magneticum AMB-1 AMB_RS23225 GGDEF domain-containing protein insig. 31 60
  Azospirillum sp. SherDot2 MPMX19_02219 hypothetical protein insig. 32 62
  Desulfovibrio vulgaris Hildenborough JW710 DVU0408 response regulator/sensory box/GGDEF domain/EAL domain protein (TIGR) sig. 32 63
  Paraburkholderia sabiae LMG 24235 QEN71_RS10745 EAL domain-containing protein insig. 31 65
  Marinobacter adhaerens HP15 HP15_3631 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) insig. 31 63
  Magnetospirillum magneticum AMB-1 AMB_RS21860 GGDEF domain-containing protein cofit 33 63
  Methylophilus sp. DMC18 GFF1786 hypothetical protein insig. 33 66
  Rhodospirillum rubrum S1H Rru_A2406 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) and Response Regulator Receiver modulation (NCBI) insig. 31 62
  Pseudomonas fluorescens SBW25 PFLU_RS05360 GGDEF and EAL domain-containing protein insig. 34 63
  Pseudomonas fluorescens SBW25-INTG PFLU_RS05360 GGDEF and EAL domain-containing protein insig. 34 63
  Dechlorosoma suillum PS Dsui_1429 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 31 61
  Lysobacter sp. OAE881 ABIE51_RS13765 EAL domain-containing protein sig. 33 59
  Cupriavidus basilensis FW507-4G11 RR42_RS28225 diguanylate cyclase insig. 34 61
  Serratia liquefaciens MT49 IAI46_24280 cyclic di-GMP phosphodiesterase cofit 31 62
  Agrobacterium fabrum C58 Atu3495 diguanylate cyclase sig. 33 61
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS00470 bifunctional diguanylate cyclase/phosphodiesterase insig. 33 63
  Kangiella aquimarina DSM 16071 B158DRAFT_0054 PAS domain S-box/diguanylate cyclase (GGDEF) domain insig. 32 62
  Pseudomonas sp. SVBP6 COO64_RS26040 EAL domain-containing protein insig. 27 89
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3263 Sensory box/GGDEF family protein insig. 31 69
  Sphingomonas koreensis DSMZ 15582 Ga0059261_4157 diguanylate cyclase (GGDEF) domain insig. 30 63
  Dechlorosoma suillum PS Dsui_2425 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 35 59
  Marinobacter adhaerens HP15 HP15_845 sensory box/GGDEF family protein insig. 34 60
  Cupriavidus basilensis FW507-4G11 RR42_RS34815 diguanylate cyclase strong 31 62
  Pseudomonas aeruginosa PA14 IKLFDK_00990 diguanylate phosphodiesterase insig. 27 98
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_467 Sensory box/GGDEF family protein insig. 31 66
  Marinobacter adhaerens HP15 HP15_1500 sensory box/GGDEF family protein insig. 30 66
  Pseudomonas sp. S08-1 OH686_19830 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 30 61
  Acinetobacter radioresistens SK82 MPMX26_01977 hypothetical protein insig. 34 61
  Dechlorosoma suillum PS Dsui_2160 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 34 62
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0097 diguanylate cyclase (GGDEF) domain insig. 32 59
  Pseudomonas sp. S08-1 OH686_08910 Phytochrome-like protein / Cph2 cofit 31 63
  Azospirillum sp. SherDot2 MPMX19_06128 hypothetical protein insig. 31 62
  Vibrio cholerae E7946 ATCC 55056 CSW01_13870 sensor domain-containing phosphodiesterase insig. 30 64
  Acidovorax sp. GW101-3H11 Ac3H11_3122 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 34 64
  Pseudomonas sp. S08-1 OH686_06280 Sensory box/GGDEF family protein insig. 33 67
  Pseudomonas sp. SVBP6 COO64_RS26530 bifunctional diguanylate cyclase/phosphodiesterase no data 31 62
  Pseudomonas syringae pv. syringae B728a Psyr_2711 diguanylate cyclase/phosphodiesterase insig. 31 81
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2711 diguanylate cyclase/phosphodiesterase insig. 31 81
  Agrobacterium fabrum C58 Atu2226 GGDEF family protein insig. 30 61
  Enterobacter asburiae PDN3 EX28DRAFT_1011 FOG: EAL domain insig. 33 63
  Rhodopseudomonas palustris CGA009 TX73_004040 EAL domain-containing protein insig. 33 60
  Pseudomonas orientalis W4I3 QF045_RS02595 EAL domain-containing protein insig. 33 62
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS17490 bifunctional diguanylate cyclase/phosphodiesterase cofit 33 60
  Rahnella sp. WP5 EX31_RS09160 EAL domain-containing protein insig. 33 60
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2512 sensory box/GGDEF domain/EAL domain protein insig. 33 61
  Rhizobium sp. OAE497 ABIE40_RS04625 EAL domain-containing protein cofit 32 62
  Variovorax sp. SCN45 GFF1448 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) sig. 31 63
  Rhizobium sp. OAE497 ABIE40_RS15510 bifunctional diguanylate cyclase/phosphodiesterase insig. 31 64
  Paraburkholderia sabiae LMG 24235 QEN71_RS10895 cyclic di-GMP phosphodiesterase strong 31 63
  Pseudomonas fluorescens FW300-N2E3 AO353_17145 diguanylate phosphodiesterase insig. 31 64
  Pseudomonas sp. S08-1 OH686_13725 Sensory box/GGDEF family protein cofit 30 64
  Rahnella sp. WP5 EX31_RS07415 bifunctional diguanylate cyclase/phosphodiesterase insig. 33 67
  Paraburkholderia sabiae LMG 24235 QEN71_RS14325 EAL domain-containing protein insig. 32 59
  Agrobacterium fabrum C58 Atu4692 diguanylate cyclase insig. 30 64
  Shewanella amazonensis SB2B Sama_3600 putative diguanylate phosphodiesterase (RefSeq) insig. 29 70
  Paraburkholderia sabiae LMG 24235 QEN71_RS30355 bifunctional diguanylate cyclase/phosphodiesterase insig. 34 61
  Pseudomonas fluorescens FW300-N2C3 AO356_22925 histidine kinase insig. 33 63
  Pseudomonas simiae WCS417 PS417_28235 diguanylate cyclase insig. 32 61
  Rhizobium sp. OAE497 ABIE40_RS26770 EAL domain-containing protein cofit 30 61
  Kangiella aquimarina DSM 16071 B158DRAFT_0955 PAS domain S-box/diguanylate cyclase (GGDEF) domain insig. 30 64
  Marinobacter adhaerens HP15 HP15_4115 sensory box/GGDEF/EAL family protein cofit 31 59
  Pseudomonas fluorescens FW300-N2E3 AO353_22910 histidine kinase insig. 31 65
  Methylophilus sp. DMC18 GFF174 hypothetical protein insig. 30 75
  Agrobacterium fabrum C58 Atu3244 diguanylate cyclase insig. 30 67
  Rhizobium sp. OAE497 ABIE40_RS26645 EAL domain-containing protein insig. 31 61
  Pseudomonas sp. RS175 PFR28_02059 Oxygen sensor protein DosP insig. 34 62