Homologs of DVU1768 from Desulfovibrio vulgaris Hildenborough JW710

GTP-binding protein (TIGR)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Desulfovibrio vulgaris Hildenborough JW710 DVU1768 GTP-binding protein (TIGR) insig. 100 100
o Shewanella sp. ANA-3 Shewana3_0705 small GTP-binding protein (RefSeq) cofit 48 97
o Shewanella oneidensis MR-1 SO3926 GTP-binding protein (NCBI ptt file) insig. 47 95
o Bacteroides ovatus ATCC 8483 BACOVA_04583 hydrogenase maturation GTPase HydF strong 43 96
o Phocaeicola dorei CL03T12C01 ABI39_RS01915 [FeFe] hydrogenase H-cluster maturation GTPase HydF strong 43 96
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS02625 [FeFe] hydrogenase H-cluster maturation GTPase HydF strong 44 96
o Bacteroides thetaiotaomicron VPI-5482 BT1837 putative GTP-binding protein, putative GTPase (NCBI ptt file) strong 41 95
  Synechococcus elongatus PCC 7942 Synpcc7942_1582 trmE tRNA modification GTPase TrmE no data 41 30
  Burkholderia phytofirmans PsJN BPHYT_RS19830 tRNA modification GTPase TrmE no data 35 42
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS10450 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE no data 31 41
  Paraburkholderia sabiae LMG 24235 QEN71_RS29655 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE no data 36 42
  Variovorax sp. SCN45 GFF3275 tRNA-5-carboxymethylaminomethyl-2-thiouridine(34) synthesis protein MnmE no data 33 42
  Desulfovibrio vulgaris Miyazaki F DvMF_0886 trmE tRNA modification GTPase TrmE (RefSeq) insig. 33 36
  Variovorax sp. OAS795 ABID97_RS02655 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE no data 32 42
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02320 tRNA modification GTPase trmE no data 31 42
  Rhodanobacter sp. FW510-T8 OKGIIK_15285 mnmE tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE insig. 33 41
  Paraburkholderia graminis OAS925 ABIE53_000332 tRNA modification GTPase no data 31 42
  Herbaspirillum seropedicae SmR1 HSERO_RS21670 tRNA modification GTPase TrmE no data 31 39
  Fusobacterium nucleatum SB010 HUW76_10755 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE no data 29 40
  Ralstonia solanacearum PSI07 RPSI07_RS23950 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE no data 33 39
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS09410 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE no data 32 39
  Ralstonia solanacearum UW163 UW163_RS04170 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE no data 32 39
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS15115 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE cofit 31 41
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2437 GTPase and tRNA-U34 5-formylation enzyme TrmE no data 30 39
  Ralstonia sp. UNC404CL21Col ABZR87_RS05350 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE strong 42 20
  Ralstonia solanacearum GMI1000 RS_RS00020 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE no data 42 20
  Cupriavidus basilensis FW507-4G11 RR42_RS20805 tRNA modification GTPase TrmE no data 44 20
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS13880 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE cofit 32 38
  Azospirillum brasilense Sp245 AZOBR_RS01805 tRNA modification GTPase TrmE insig. 49 17
  Bacteroides thetaiotaomicron VPI-5482 BT4551 putative GTPase, ThdF family (NCBI ptt file) strong 29 41
  Pectobacterium carotovorum WPP14 HER17_RS05820 GTPase Era no data 25 39
  Bosea sp. OAE506 ABIE41_RS04680 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE insig. 34 39
  Azospirillum sp. SherDot2 MPMX19_02568 tRNA modification GTPase MnmE no data 54 14
  Sinorhizobium meliloti 1021 SMc02797 tRNA modification GTPase TrmE no data 39 29
  Shewanella amazonensis SB2B Sama_0008 trmE tRNA modification GTPase TrmE (RefSeq) no data 34 37
  Dickeya dianthicola ME23 DZA65_RS16895 GTPase Era no data 26 39
  Dickeya dadantii 3937 DDA3937_RS15730 GTPase Era no data 26 39
  Dickeya dianthicola 67-19 HGI48_RS15815 GTPase Era no data 26 39
  Bifidobacterium breve UCC2003 BBR_RS15705 ribosome biogenesis GTPase Der no data 42 22
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_06625 tRNA modification GTPase no data 31 36
  Bacteroides ovatus ATCC 8483 BACOVA_05338 tRNA modification GTPase TrmE strong 42 20
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS07145 GTPase Era no data 34 28
  Phocaeicola dorei CL03T12C01 ABI39_RS18355 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE strong 36 27
  Bacteroides stercoris CC31F HMPREF1181_RS13360 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE cofit 42 20
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS05755 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE strong 36 27
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS19070 GTP-binding protein insig. 33 34
  Azospirillum brasilense Sp245 AZOBR_RS10310 ribosome-associated GTPase EngA no data 32 44
  Dechlorosoma suillum PS Dsui_0837 tRNA modification GTPase TrmE strong 40 23
  Enterobacter sp. TBS_079 MPMX20_04650 tRNA modification GTPase MnmE strong 30 37
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1750 GTPase and tRNA-U34 5-formylation enzyme TrmE strong 30 37
  Castellaniella sp019104865 MT123 ABCV34_RS11895 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE no data 36 39
  Rhodanobacter denitrificans MT42 LRK55_RS08270 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE insig. 33 41
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS08505 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE insig. 33 41
  Rhodanobacter sp. FW510-T8 OKGIIK_07865 era GTPase Era no data 33 28
  Rhodanobacter denitrificans MT42 LRK55_RS16690 GTPase Era no data 30 38
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS16975 GTPase Era no data 30 38
  Phaeobacter inhibens DSM 17395 PGA1_c35110 tRNA modification GTPase MnmE no data 45 16
  Rahnella sp. WP5 EX31_RS21840 GTPase Era no data 26 39
  Acidovorax sp. GW101-3H11 Ac3H11_4264 GTPase and tRNA-U34 5-formylation enzyme TrmE strong 43 18
  Rhodospirillum rubrum S1H Rru_A3624 tRNA modification GTPase TrmE (NCBI) no data 42 18
  Desulfovibrio vulgaris Miyazaki F DvMF_2263 engA GTP-binding protein EngA (RefSeq) no data 35 31
  Alteromonas macleodii MIT1002 MIT1002_04128 tRNA modification GTPase MnmE no data 29 38
  Magnetospirillum magneticum AMB-1 AMB_RS00005 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE no data 47 15
  Enterobacter asburiae PDN3 EX28DRAFT_3993 tRNA modification GTPase TrmE no data 30 37
  Synechococcus elongatus PCC 7942 Synpcc7942_0107 Small GTP-binding protein domain no data 31 31
  Klebsiella michiganensis M5al BWI76_RS00050 tRNA modification GTPase no data 30 37
  Pantoea sp. MT58 IAI47_04885 GTPase Era no data 25 39
  Vibrio cholerae E7946 ATCC 55056 CSW01_00015 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE strong 31 37
  Desulfovibrio vulgaris Hildenborough JW710 DVU3194 engA GTP-binding protein EngA (TIGR) no data 34 30
  Rahnella sp. WP5 EX31_RS06000 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE strong 29 37
  Rhodopseudomonas palustris CGA009 TX73_001535 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE strong 47 15
  Shewanella oneidensis MR-1 SO0003 trmE tRNA modification GTPase TrmE (NCBI ptt file) strong 37 23
  Marinobacter adhaerens HP15 HP15_3698 tRNA modification GTPase TrmE no data 36 24
  Lysobacter sp. OAE881 ABIE51_RS09440 ribosome biogenesis GTPase Der no data 31 39
  Lysobacter sp. OAE881 ABIE51_RS13855 GTPase Era no data 28 44
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.5407.1 GTPase and tRNA-U34 5-formylation enzyme TrmE insig. 35 23
  Rhodanobacter sp. FW510-T8 OKGIIK_01580 GTP-binding protein HSR1 insig. 30 31
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS02725 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE no data 48 15
  Shewanella sp. ANA-3 Shewana3_0005 trmE tRNA modification GTPase TrmE (RefSeq) strong 37 23
  Desulfovibrio vulgaris Hildenborough JW710 DVU1079 trmE tRNA modification GTPase TrmE (TIGR) sig. 35 20
  Pseudomonas stutzeri RCH2 Psest_4373 tRNA modification GTPase TrmE no data 30 36
  Escherichia coli ECRC101 OKFHMN_14985 tRNA modification GTPase MnmE no data 30 37
  Escherichia coli ECRC101 MCAODC_05495 tRNA modification GTPase MnmE no data 30 37
  Escherichia coli ECRC102 NIAGMN_12740 tRNA modification GTPase MnmE no data 30 37
  Escherichia coli ECRC98 JDDGAC_18605 tRNA modification GTPase MnmE no data 30 37
  Escherichia coli ECRC99 KEDOAH_13165 tRNA modification GTPase MnmE no data 30 37
  Lysobacter sp. OAE881 ABIE51_RS19010 ribosome biogenesis GTP-binding protein YihA/YsxC no data 30 38
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2732.1 GTP-binding protein EngA no data 29 44
  Erwinia tracheiphila SCR3 LU632_RS25300 mnmE tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE no data 29 37
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3509 tRNA modification GTPase TrmE no data 37 21
  Acinetobacter radioresistens SK82 MPMX26_03070 tRNA modification GTPase MnmE strong 35 22
  Pectobacterium carotovorum WPP14 HER17_RS21825 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE sig. 30 37
  Escherichia fergusonii Becca EFB2_04925 tRNA modification GTPase MnmE cofit 30 37
  Escherichia coli ECOR38 HEPCGN_13680 tRNA modification GTPase MnmE cofit 30 37
  Escherichia coli ECRC62 BNILDI_04405 tRNA modification GTPase MnmE insig. 30 37
  Escherichia coli Nissle 1917 ECOLIN_RS21345 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE cofit 30 37
  Escherichia coli BW25113 b3706 trmE tRNA modification GTPase (NCBI) strong 30 37
  Dinoroseobacter shibae DFL-12 Dshi_3454 tRNA modification GTPase TrmE (RefSeq) no data 44 16
  Shewanella loihica PV-4 Shew_3865 trmE tRNA modification GTPase TrmE (RefSeq) no data 30 42
  Lysobacter sp. OAE881 ABIE51_RS00735 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE cofit 39 21