Homologs of DVU1273 from Desulfovibrio vulgaris Hildenborough JW710

bacterial type II/III secretion system protein (TIGR)
SEED: Type IV pilus biogenesis protein PilQ
KEGG: type IV pilus assembly protein PilQ

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Desulfovibrio vulgaris Hildenborough JW710 DVU1273 bacterial type II/III secretion system protein (TIGR) strong 100 100
o Desulfovibrio vulgaris Miyazaki F DvMF_1027 type II and III secretion system protein (RefSeq) cofit 75 95
  Pseudomonas stutzeri RCH2 Psest_3715 type IV pilus secretin (or competence protein) PilQ strong 30 89
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1539 Type IV pilus biogenesis protein PilQ insig. 31 82
  Pseudomonas syringae pv. syringae B728a Psyr_0407 type II and III secretion system protein:NolW-like protein:NolW-like protein insig. 29 82
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0407 type II and III secretion system protein:NolW-like protein:NolW-like protein insig. 29 82
  Pseudomonas fluorescens GW456-L13 PfGW456L13_277 Type IV pilus biogenesis protein PilQ insig. 30 83
  Pseudomonas sp. S08-1 OH686_10025 Type IV pilus biogenesis protein PilQ cofit 30 82
  Pseudomonas fluorescens FW300-N2E3 AO353_12495 fimbrial protein insig. 30 82
  Pseudomonas sp. RS175 PFR28_05011 Type 3 secretion system secretin insig. 30 82
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3756 Type IV pilus biogenesis protein PilQ insig. 29 82
  Pseudomonas fluorescens FW300-N2C3 AO356_09395 fimbrial protein insig. 29 82
  Kangiella aquimarina DSM 16071 B158DRAFT_0762 type IV pilus secretin (or competence protein) PilQ cofit 30 88
o Paraburkholderia sabiae LMG 24235 QEN71_RS28045 type IV pilus secretin PilQ insig. 29 93
  Shewanella loihica PV-4 Shew_0212 type IV pilus secretin PilQ (RefSeq) sig. 29 86
  Shewanella amazonensis SB2B Sama_3369 type IV pilus biogenesis protein PilQ (RefSeq) insig. 29 84
o Enterobacter sp. TBS_079 MPMX20_04280 Type IV pilus biogenesis and competence protein PilQ sig. 31 83
  Alteromonas macleodii MIT1002 MIT1002_00449 Type IV pilus biogenesis and competence protein PilQ precursor insig. 30 83
  Shewanella oneidensis MR-1 SO0285 type IV pilus biogenesis protein PilQ (NCBI ptt file) insig. 28 82
o Klebsiella michiganensis M5al BWI76_RS26100 DNA transporter HofQ insig. 30 83
o Escherichia fergusonii Becca EFB2_00437 Type IV pilus biogenesis and competence protein PilQ insig. 29 82
  Shewanella sp. ANA-3 Shewana3_3895 type IV pilus secretin PilQ (RefSeq) insig. 27 82
o Dickeya dianthicola 67-19 HGI48_RS19685 DNA uptake porin HofQ insig. 29 82
o Dickeya dianthicola ME23 DZA65_RS20770 DNA uptake porin HofQ insig. 29 82
o Pseudomonas fluorescens SBW25 PFLU_RS02020 type IV pilus secretin PilQ family protein insig. 29 82
o Pseudomonas fluorescens SBW25-INTG PFLU_RS02020 type IV pilus secretin PilQ family protein insig. 29 82
  Burkholderia phytofirmans PsJN BPHYT_RS17895 secretin insig. 29 82
  Ralstonia sp. UNC404CL21Col ABZR87_RS02600 temperature dependent type IV pilus secretin PilQ strong 29 82
o Escherichia coli ECRC62 BNILDI_02625 hofQ DNA uptake porin HofQ insig. 29 82
o Escherichia coli Nissle 1917 ECOLIN_RS19370 DNA uptake porin HofQ insig. 29 82
o Escherichia coli BW25113 b3391 hofQ predicted fimbrial transporter (NCBI) strong 29 82
  Marinobacter adhaerens HP15 HP15_478 type 4 fimbrial biogenesis protein PilQ sig. 28 86
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS06945 type IV pilus secretin PilQ cofit 29 82
  Ralstonia solanacearum UW163 UW163_RS06670 type IV pilus secretin PilQ insig. 29 82
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05613 type IV pilus assembly protein PilQ insig. 29 82
o Escherichia coli ECOR38 HEPCGN_15925 hofQ DNA uptake porin HofQ cofit 29 82
o Escherichia coli ECRC101 OKFHMN_17105 hofQ DNA uptake porin HofQ insig. 29 82
o Escherichia coli ECRC101 MCAODC_07635 hofQ DNA uptake porin HofQ insig. 29 82
o Escherichia coli ECRC102 NIAGMN_14875 hofQ DNA uptake porin HofQ insig. 29 82
o Escherichia coli ECRC98 JDDGAC_20735 hofQ DNA uptake porin HofQ no data 29 82
o Escherichia coli ECRC99 KEDOAH_11035 hofQ DNA uptake porin HofQ no data 29 82
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00312 Type IV pilus biogenesis and competence protein PilQ insig. 29 82
  Ralstonia solanacearum PSI07 RPSI07_RS10290 type IV pilus secretin PilQ cofit 29 82
o Escherichia coli ECOR27 NOLOHH_08895 hofQ DNA uptake porin HofQ cofit 28 82
  Rhodanobacter sp. FW510-T8 OKGIIK_12040 pilQ type IV pilus secretin PilQ insig. 29 82
o Escherichia coli BL21 ECD_03243 DNA catabolic putative fimbrial transporter cofit 28 82
  Paraburkholderia graminis OAS925 ABIE53_003742 type IV pilus assembly protein PilQ insig. 28 82
o Enterobacter asburiae PDN3 EX28DRAFT_4151 type IV pilus secretin (or competence protein) PilQ insig. 29 82
o Dickeya dadantii 3937 DDA3937_RS19555 DNA uptake porin HofQ insig. 29 82
  Ralstonia solanacearum GMI1000 RS_RS14890 type IV pilus secretin PilQ insig. 29 82
o Serratia liquefaciens MT49 IAI46_23715 DNA uptake porin HofQ insig. 26 82
  Rhodanobacter denitrificans MT42 LRK55_RS11580 type IV pilus secretin PilQ cofit 29 82
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS11855 type IV pilus secretin PilQ strong 29 82
  Cupriavidus basilensis FW507-4G11 RR42_RS19015 secretin insig. 27 82
o Pseudomonas putida KT2440 PP_5080 type 4 pili biogenesis protein insig. 28 82
o Pseudomonas simiae WCS417 PS417_01975 pilus assembly protein PilQ insig. 28 82
o Rahnella sp. WP5 EX31_RS04730 DNA uptake porin HofQ insig. 26 83
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF628 Type IV pilus biogenesis protein PilQ insig. 28 80
  Herbaspirillum seropedicae SmR1 HSERO_RS20915 secretin insig. 29 83
  Acinetobacter radioresistens SK82 MPMX26_02812 Type 3 secretion system secretin cofit 27 82
o Pectobacterium carotovorum WPP14 HER17_RS01770 DNA uptake porin HofQ insig. 26 82
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1189.1 Type IV pilus biogenesis protein PilQ insig. 27 82
  Acidovorax sp. GW101-3H11 Ac3H11_4703 Type IV pilus biogenesis protein PilQ insig. 27 86
  Vibrio cholerae E7946 ATCC 55056 CSW01_13310 type IV pilus secretin PilQ insig. 27 86
  Variovorax sp. SCN45 GFF5323 Type IV pilus biogenesis protein PilQ strong 27 83
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS11790 type IV pilus secretin PilQ cofit 28 82
  Lysobacter sp. OAE881 ABIE51_RS17165 type IV pilus secretin PilQ family protein insig. 27 84
o Erwinia tracheiphila SCR3 LU632_RS22875 hofQ DNA uptake porin HofQ insig. 26 82
  Dechlorosoma suillum PS Dsui_1191 type IV pilus secretin PilQ/competence protein cofit 28 82
  Variovorax sp. OAS795 ABID97_RS23265 type IV pilus secretin PilQ strong 27 83
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1333 Type IV pilus biogenesis protein PilQ cofit 27 82
o Pantoea sp. MT58 IAI47_01885 DNA uptake porin HofQ insig. 27 82
  Acinetobacter radioresistens SK82 MPMX26_00196 Secretin XcpQ cofit 31 57
  Ralstonia solanacearum GMI1000 RS_RS15640 type II secretion system protein GspD strong 30 58
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS07740 type II secretion system protein GspD strong 30 58
  Ralstonia solanacearum UW163 UW163_RS05885 type II secretion system protein GspD insig. 30 58
  Ralstonia solanacearum PSI07 RPSI07_RS09520 type II secretion system protein GspD cofit 31 58
  Pseudomonas fluorescens FW300-N2C3 AO356_24790 type II secretion system protein GspD insig. 28 59
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_651 General secretion pathway protein D insig. 28 59
  Pseudomonas fluorescens SBW25 PFLU_RS15750 type II secretion system secretin GspD insig. 27 57
  Pseudomonas fluorescens SBW25-INTG PFLU_RS15750 type II secretion system secretin GspD insig. 27 57
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1390 General secretion pathway protein D insig. 28 58
  Shewanella amazonensis SB2B Sama_0169 type II and III secretion system protein (RefSeq) strong 28 63
  Escherichia fergusonii Becca EFB2_00845 Secretin GspD 2 insig. 26 63
  Pseudomonas fluorescens SBW25 PFLU_RS11890 type II secretion system secretin GspD insig. 26 56
  Pseudomonas fluorescens SBW25-INTG PFLU_RS11890 type II secretion system secretin GspD insig. 26 56
  Pseudomonas fluorescens GW456-L13 PfGW456L13_266 General secretion pathway protein D insig. 28 64
  Pseudomonas sp. RS175 PFR28_01750 Secretin XcpQ insig. 28 57
  Shewanella oneidensis MR-1 SO0166 gspD general secretion pathway protein D (NCBI ptt file) strong 27 63
  Pseudomonas fluorescens FW300-N2C3 AO356_09345 type II secretion system protein GspD insig. 28 64
  Shewanella sp. ANA-3 Shewana3_0151 general secretion pathway protein D (RefSeq) strong 27 63
  Escherichia coli ECOR27 NOLOHH_10975 gspD general secretion pathway protein D cofit 26 63
  Escherichia coli ECOR38 HEPCGN_18050 gspD general secretion pathway protein D strong 26 63
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00739 Type II secretion system protein D insig. 26 63
  Escherichia coli Nissle 1917 ECOLIN_RS17085 type II secretion system secretin GspD insig. 26 63
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3746 General secretion pathway protein D insig. 28 64
  Escherichia coli BL21 ECD_02838 putative type II secretion protein GspD strong 26 63
  Rahnella sp. WP5 EX31_RS16165 type II secretion system secretin GspD insig. 27 63
  Pseudomonas fluorescens FW300-N2E3 AO353_12545 type II secretion system protein GspD insig. 30 64
  Pseudomonas simiae WCS417 PS417_11295 general secretion pathway protein GspD insig. 26 56