| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Xanthomonas campestris pv. campestris strain 8004 | 1.0 | Xcc-8004.1205.1 | | hypothetical protein | 1.0 | Xcc-8004.2322.1 | | N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) | 0.80 | 6 |
| Lysobacter sp. OAE881 | 0.82 | ABIE51_RS17260 | | RidA family protein | 0.65 | ABIE51_RS13385 | | N-acetyl-gamma-glutamyl-phosphate reductase | 0.90 | 27 |
| Dyella japonica UNC79MFTsu3.2 | 0.79 | ABZR86_RS11845 | | RidA family protein | 0.70 | ABZR86_RS08700 | | N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) | low | > 74 |
| Rhodanobacter sp. FW510-T8 | 0.79 | OKGIIK_12095 | ridA | reactive intermediate/imine deaminase | 0.71 | OKGIIK_09435 | argC | N-acetyl-gamma-glutamyl-phosphate reductase | low | > 52 |
| Rhodanobacter denitrificans MT42 | 0.79 | LRK55_RS11525 | | RidA family protein | 0.71 | LRK55_RS02140 | | N-acetyl-gamma-glutamyl-phosphate reductase | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.79 | LRK54_RS11800 | | RidA family protein | 0.71 | LRK54_RS02385 | | N-acetyl-gamma-glutamyl-phosphate reductase | 0.68 | 16 |
| Pseudomonas stutzeri RCH2 | 0.64 | Psest_3818 | | endoribonuclease L-PSP, putative | 0.23 | Psest_3639 | | N-acetyl-gamma-glutamyl-phosphate reductase, common form | — | — |
| Marinobacter adhaerens HP15 | 0.62 | HP15_306 | | YjgF-like protein | 0.23 | HP15_352 | | N-acetyl-gamma-glutamyl-phosphate reductase | 0.75 | 23 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.62 | Psyr_0208 | | endoribonuclease L-PSP | 0.22 | Psyr_4569 | | N-acetyl-gamma-glutamyl-phosphate reductase | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.62 | Psyr_0208 | | endoribonuclease L-PSP | 0.22 | Psyr_4569 | | N-acetyl-gamma-glutamyl-phosphate reductase | — | — |
| Pseudomonas putida KT2440 | 0.61 | PP_5303 | | aminoacrylate/iminopropionate hydrolase/deaminase | 0.24 | PP_0432 | | N-acetyl-gamma-glutamyl-phosphate reductase 1 | low | > 96 |
| Pseudomonas simiae WCS417 | 0.61 | PS417_27835 | | endoribonuclease | 0.23 | PS417_25660 | | N-acetyl-gamma-glutamyl-phosphate reductase | — | — |
| Pseudomonas fluorescens SBW25 | 0.61 | PFLU_RS29515 | | RidA family protein | 0.22 | PFLU_RS27315 | | N-acetyl-gamma-glutamyl-phosphate reductase | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.61 | PFLU_RS29515 | | RidA family protein | 0.22 | PFLU_RS27315 | | N-acetyl-gamma-glutamyl-phosphate reductase | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.61 | Pf6N2E2_4360 | | Bona fide RidA/YjgF/TdcF/RutC subgroup | 0.23 | Pf6N2E2_4836 | | N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) | low | > 103 |
| Pseudomonas sp. RS175 | 0.61 | PFR28_04425 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.23 | PFR28_04033 | | N-acetyl-gamma-glutamyl-phosphate reductase | low | > 88 |
| Dechlorosoma suillum PS | 0.61 | Dsui_0312 | | endoribonuclease L-PSP, putative | 0.16 | Dsui_0782 | | N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.60 | Pf1N1B4_2112 | | Bona fide RidA/YjgF/TdcF/RutC subgroup | 0.23 | Pf1N1B4_2559 | | N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.60 | AO356_12475 | | reactive intermediate/imine deaminase | 0.23 | AO356_14490 | | N-acetyl-gamma-glutamyl-phosphate reductase | low | > 104 |
| Pseudomonas fluorescens FW300-N2E3 | 0.60 | AO353_09285 | | reactive intermediate/imine deaminase | 0.23 | AO353_07155 | | N-acetyl-gamma-glutamyl-phosphate reductase | low | > 101 |
| Pseudomonas fluorescens GW456-L13 | 0.60 | PfGW456L13_779 | | Bona fide RidA/YjgF/TdcF/RutC subgroup | 0.23 | PfGW456L13_1233 | | N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) | 0.64 | 37 |
| Alteromonas macleodii MIT1002 | 0.58 | MIT1002_00109 | | Putative reactive intermediate deaminase TdcF | 0.18 | MIT1002_00471 | | N-acetyl-gamma-glutamyl-phosphate reductase | low | > 70 |
| Kangiella aquimarina DSM 16071 | 0.57 | B158DRAFT_0573 | | endoribonuclease L-PSP, putative | 0.47 | B158DRAFT_1979 | | N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) | low | > 40 |
| Shewanella amazonensis SB2B | 0.57 | Sama_0263 | | YjgF-like protein (RefSeq) | 0.19 | Sama_0256 | argC | N-acetyl-gamma-glutamyl-phosphate reductase (RefSeq) | 0.65 | 55 |
| Acinetobacter radioresistens SK82 | 0.57 | MPMX26_02797 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.24 | MPMX26_01281 | | N-acetyl-gamma-glutamyl-phosphate reductase | low | > 36 |
| Castellaniella sp019104865 MT123 | 0.57 | ABCV34_RS03565 | | Rid family detoxifying hydrolase | 0.23 | ABCV34_RS10590 | | N-acetyl-gamma-glutamyl-phosphate reductase | — | — |
| Pseudomonas sp. S08-1 | 0.57 | OH686_13545 | | RidA/YER057c/UK114 superfamily protein | 0.24 | OH686_15195 | | N-acetyl-gamma-glutamyl-phosphate reductase | low | > 80 |
| Shewanella oneidensis MR-1 | 0.56 | SO0358 | | endoribonuclease L-PSP, putative (NCBI ptt file) | 0.18 | SO0275 | argC | N-acetyl-gamma-glutamyl-phosphate reductase (NCBI ptt file) | low | > 76 |
| Azospirillum brasilense Sp245 | 0.56 | AZOBR_RS32435 | | dfrA | 0.21 | AZOBR_RS07795 | | N-acetyl-gamma-glutamyl-phosphate reductase | — | — |
| Shewanella loihica PV-4 | 0.56 | Shew_3500 | | putative endoribonuclease L-PSP (RefSeq) | 0.19 | Shew_0202 | argC | N-acetyl-gamma-glutamyl-phosphate reductase (RefSeq) | 0.74 | 27 |
| Shewanella sp. ANA-3 | 0.56 | Shewana3_3813 | | putative endoribonuclease L-PSP (RefSeq) | 0.18 | Shewana3_3905 | argC | N-acetyl-gamma-glutamyl-phosphate reductase (RefSeq) | low | > 73 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.53 | DVU2647 | | endoribonuclease, L-PSP family (TIGR) | 0.21 | DVU0492 | argC | N-acetyl-gamma-glutamyl-phosphate reductase (TIGR) | low | > 55 |
| Vibrio cholerae E7946 ATCC 55056 | 0.52 | CSW01_12735 | | RidA family protein | 0.22 | CSW01_13380 | | N-acetyl-gamma-glutamyl-phosphate reductase | low | > 62 |
| Dickeya dadantii 3937 | 0.51 | DDA3937_RS01915 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.22 | DDA3937_RS20350 | | N-acetyl-gamma-glutamyl-phosphate reductase | low | > 74 |
| Phocaeicola vulgatus CL09T03C04 | 0.51 | HMPREF1058_RS18400 | | RidA family protein | 0.22 | HMPREF1058_RS08840 | | N-acetyl-gamma-glutamyl-phosphate reductase | low | > 67 |
| Phocaeicola dorei CL03T12C01 | 0.51 | ABI39_RS14715 | | RidA family protein | 0.22 | ABI39_RS02970 | | N-acetyl-gamma-glutamyl-phosphate reductase | low | > 72 |
| Dickeya dianthicola 67-19 | 0.51 | HGI48_RS01890 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.22 | HGI48_RS00875 | | N-acetyl-gamma-glutamyl-phosphate reductase | — | — |
| Dickeya dianthicola ME23 | 0.51 | DZA65_RS01960 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.22 | DZA65_RS00935 | | N-acetyl-gamma-glutamyl-phosphate reductase | low | > 75 |
| Escherichia coli ECRC99 | 0.50 | KEDOAH_16280 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.18 | KEDOAH_14575 | argC | N-acetyl-gamma-glutamyl-phosphate reductase | — | — |
| Escherichia coli ECOR27 | 0.50 | NOLOHH_04135 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.19 | NOLOHH_05730 | argC | N-acetyl-gamma-glutamyl-phosphate reductase | low | > 75 |
| Escherichia coli ECRC98 | 0.50 | JDDGAC_15515 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.18 | JDDGAC_17210 | argC | N-acetyl-gamma-glutamyl-phosphate reductase | low | > 86 |
| Escherichia coli ECRC62 | 0.50 | BNILDI_07375 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.19 | BNILDI_05795 | argC | N-acetyl-gamma-glutamyl-phosphate reductase | low | > 75 |
| Escherichia coli Nissle 1917 | 0.50 | ECOLIN_RS24615 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.18 | ECOLIN_RS22845 | | N-acetyl-gamma-glutamyl-phosphate reductase | low | > 55 |
| Escherichia coli ECRC102 | 0.50 | NIAGMN_09725 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.18 | NIAGMN_11335 | argC | N-acetyl-gamma-glutamyl-phosphate reductase | — | — |
| Escherichia coli ECRC101 | 0.50 | MCAODC_02380 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.18 | MCAODC_04085 | argC | N-acetyl-gamma-glutamyl-phosphate reductase | low | > 87 |
| Escherichia coli ECRC100 | 0.50 | OKFHMN_11875 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.18 | OKFHMN_13585 | argC | N-acetyl-gamma-glutamyl-phosphate reductase | low | > 80 |
| Escherichia coli ECOR38 | 0.50 | HEPCGN_10070 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.19 | HEPCGN_12230 | argC | N-acetyl-gamma-glutamyl-phosphate reductase | low | > 87 |
| Escherichia fergusonii Becca | 0.50 | EFB2_04290 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.18 | EFB2_04656 | | N-acetyl-gamma-glutamyl-phosphate reductase | low | > 86 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.50 | OHPLBJKB_03791 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.19 | OHPLBJKB_04092 | | N-acetyl-gamma-glutamyl-phosphate reductase | low | > 73 |
| Escherichia coli BW25113 | 0.50 | b4243 | yjgF | orf, hypothetical protein (VIMSS) | 0.19 | b3958 | argC | N-acetyl-gamma-glutamyl-phosphate reductase (NCBI) | low | > 76 |
| Escherichia coli BL21 | 0.50 | ECD_04111 | | enamine/imine deaminase, reaction intermediate detoxification | 0.19 | ECD_03843 | | N-acetyl-gamma-glutamylphosphate reductase, NAD(P)-binding | low | > 61 |
| Klebsiella michiganensis M5al | 0.49 | BWI76_RS02985 | | reactive intermediate/imine deaminase | 0.20 | BWI76_RS00845 | | N-acetyl-gamma-glutamyl-phosphate reductase | 0.42 | 23 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.49 | CA265_RS22825 | | reactive intermediate/imine deaminase | 0.21 | CA265_RS18540 | | N-succinylglutamylphosphate reductase (EC 1.2.1.38) (from data) | 0.80 | 52 |
| Paraburkholderia sabiae LMG 24235 | 0.49 | QEN71_RS41190 | | RidA family protein | 0.17 | QEN71_RS28485 | | N-acetyl-gamma-glutamyl-phosphate reductase | — | — |
| Pantoea sp. MT58 | 0.48 | IAI47_16870 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.20 | IAI47_00905 | | N-acetyl-gamma-glutamyl-phosphate reductase | low | > 76 |
| Rahnella sp. WP5 | 0.48 | EX31_RS12775 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.19 | EX31_RS14190 | | N-acetyl-gamma-glutamyl-phosphate reductase | low | > 89 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.47 | GFF928 | | Endoribonuclease L-PSP | 0.18 | GFF2344 | | N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) | low | > 78 |
| Enterobacter sp. TBS_079 | 0.47 | MPMX20_00542 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.20 | MPMX20_04522 | | N-acetyl-gamma-glutamyl-phosphate reductase | 0.31 | 69 |
| Enterobacter asburiae PDN3 | 0.47 | EX28DRAFT_3444 | | reactive intermediate/imine deaminase | 0.20 | EX28DRAFT_4420 | | N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) | low | > 76 |
| Pectobacterium carotovorum WPP14 | 0.47 | HER17_RS19520 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.22 | HER17_RS20630 | | N-acetyl-gamma-glutamyl-phosphate reductase | 0.51 | 66 |
| Parabacteroides merdae CL09T00C40 | 0.46 | HMPREF1078_RS02020 | | RidA family protein | 0.23 | HMPREF1078_RS10580 | | N-acetyl-gamma-glutamyl-phosphate reductase | low | > 61 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.44 | BT1336 | | putative translation initiation inhibitor (NCBI ptt file) | 0.25 | BT3759 | | N-succinylglutamylphosphate reductase (EC 1.2.1.-) (from data) | 0.65 | 34 |
| Bacteroides ovatus ATCC 8483 | 0.44 | BACOVA_00589 | | putative endoribonuclease L-PSP | 0.24 | BACOVA_03589 | | N-acetyl-gamma-glutamyl-phosphate reductase | 0.61 | 35 |
| Erwinia tracheiphila SCR3 | 0.44 | LU632_RS20960 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.20 | LU632_RS19615 | argC | N-acetyl-gamma-glutamyl-phosphate reductase | 0.54 | 69 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.43 | ABZR88_RS17245 | | RidA family protein | 0.24 | ABZR88_RS15505 | | N-acetyl-gamma-glutamyl-phosphate reductase | — | — |
| Desulfovibrio vulgaris Miyazaki F | 0.43 | DvMF_1512 | | endoribonuclease L-PSP (RefSeq) | 0.18 | DvMF_1717 | argC | N-acetyl-gamma-glutamyl-phosphate reductase (RefSeq) | — | — |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.43 | Echvi_1327 | | endoribonuclease L-PSP, putative | 0.23 | Echvi_3847 | | N-succinylglutamylphosphate reductase (EC 1.2.1.-) (from data) | low | > 79 |
| Bacteroides stercoris CC31F | 0.43 | HMPREF1181_RS10885 | | RidA family protein | 0.24 | HMPREF1181_RS03450 | | N-acetyl-gamma-glutamyl-phosphate reductase | low | > 56 |
| Synechococcus elongatus PCC 7942 | 0.43 | Synpcc7942_0972 | | YjgF-like protein | 0.22 | Synpcc7942_1433 | argC | N-acetyl-gamma-glutamyl-phosphate reductase | — | — |
| Serratia liquefaciens MT49 | 0.42 | IAI46_02265 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.20 | IAI46_24515 | | N-acetyl-gamma-glutamyl-phosphate reductase | low | > 86 |
| Ralstonia solanacearum UW163 | 0.39 | UW163_RS22060 | | endoribonuclease L-PSP | 0.17 | UW163_RS03490 | | N-acetyl-gamma-glutamyl-phosphate reductase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.39 | RALBFv3_RS20925 | | endoribonuclease L-PSP | 0.17 | RALBFv3_RS10090 | | N-acetyl-gamma-glutamyl-phosphate reductase | low | > 76 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.38 | CA264_17590 | | RidA family protein | 0.23 | CA264_06250 | | N-acetyl-gamma-glutamyl-phosphate reductase | low | > 74 |
| Bifidobacterium breve UCC2003 | 0.35 | BBR_RS12070 | | endoribonuclease L-PSP | 0.18 | BBR_RS13885 | | N-acetyl-gamma-glutamyl-phosphate reductase | low | > 34 |
| Variovorax sp. SCN45 | 0.33 | GFF3442 | | RidA/YER057c/UK114 superfamily protein | 0.13 | GFF4146 | | N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) | low | > 127 |
| Sinorhizobium meliloti 1021 | 0.33 | SM_b20377 | | translation initiation inhibitor protein | 0.16 | SMc01801 | | N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) | low | > 103 |
| Variovorax sp. OAS795 | 0.32 | ABID97_RS22895 | | RidA family protein | 0.12 | ABID97_RS02250 | | N-acetyl-gamma-glutamyl-phosphate reductase | — | — |
| Dinoroseobacter shibae DFL-12 | 0.31 | Dshi_0720 | | Endoribonuclease L-PSP (RefSeq) | 0.19 | Dshi_1759 | | N-acetyl-gamma-glutamyl-phosphate reductase (RefSeq) | — | — |
| Agrobacterium fabrum C58 | 0.30 | Atu3926 | | translation initiation inhibitor | 0.16 | Atu1244 | | N-acetyl-gamma-glutamyl-phosphate reductase | — | — |
| Azospirillum sp. SherDot2 | 0.30 | MPMX19_04018 | | 2-aminomuconate deaminase | 0.21 | MPMX19_03843 | | N-acetyl-gamma-glutamyl-phosphate reductase | — | — |
| Paraburkholderia graminis OAS925 | 0.28 | ABIE53_000758 | | reactive intermediate/imine deaminase | 0.15 | ABIE53_000020 | | N-acetyl-gamma-glutamyl-phosphate reductase | low | > 113 |
| Herbaspirillum seropedicae SmR1 | 0.28 | HSERO_RS08735 | | hypothetical protein | 0.21 | HSERO_RS19210 | | N-acetyl-gamma-glutamyl-phosphate reductase | low | > 78 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.28 | GFF3622 | | Bona fide RidA/YjgF/TdcF/RutC subgroup | 0.14 | GFF2503 | | N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) | — | — |
| Rhizobium sp. OAE497 | 0.28 | ABIE40_RS21405 | | RidA family protein | 0.14 | ABIE40_RS06930 | | N-acetyl-gamma-glutamyl-phosphate reductase | low | > 107 |
| Caulobacter crescentus NA1000 | 0.27 | CCNA_02886 | | RutC-family pyrimidine utilization protein C | 0.16 | CCNA_01442 | | N-acetyl-gamma-glutamyl-phosphate reductase | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.27 | CCNA_02886 | | RutC-family pyrimidine utilization protein C | 0.16 | CCNA_01442 | | N-acetyl-gamma-glutamyl-phosphate reductase | low | > 67 |
| Ralstonia solanacearum GMI1000 | 0.26 | RS_RS24425 | | RidA family protein | 0.17 | RS_RS00700 | | N-acetyl-gamma-glutamyl-phosphate reductase | — | — |
| Ralstonia sp. UNC404CL21Col | 0.25 | ABZR87_RS17675 | | RidA family protein | 0.17 | ABZR87_RS05600 | | N-acetyl-gamma-glutamyl-phosphate reductase | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.25 | RPSI07_RS06815 | | RidA family protein | 0.18 | RPSI07_RS23280 | | N-acetyl-gamma-glutamyl-phosphate reductase | low | > 81 |
| Bosea sp. OAE506 | 0.22 | ABIE41_RS17855 | | RidA family protein | 0.20 | ABIE41_RS15755 | | N-acetyl-gamma-glutamyl-phosphate reductase | low | > 77 |
Not shown: 3 genomes with orthologs for Xcc-8004.1205.1 only; 9 genomes with orthologs for Xcc-8004.2322.1 only