Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Rhodopseudomonas palustris CGA009 | 1.0 | TX73_000960 | | dihydrolipoyl dehydrogenase | 1.0 | TX73_024110 | | transketolase | 0.46 | 11 |
Sinorhizobium meliloti 1021 | 0.69 | SMc02487 | | dihydrolipoamide dehydrogenase | 0.58 | SM_b20200 | | transketolase | — | — |
Caulobacter crescentus NA1000 | 0.63 | CCNA_00346 | | dihydrolipoamide dehydrogenase | 0.53 | CCNA_03735 | | transketolase | — | — |
Caulobacter crescentus NA1000 Δfur | 0.63 | CCNA_00346 | | dihydrolipoamide dehydrogenase | 0.53 | CCNA_03735 | | transketolase | — | — |
Azospirillum brasilense Sp245 | 0.62 | AZOBR_RS03960 | | dihydrolipoamide dehydrogenase | 0.59 | AZOBR_RS09010 | | transketolase | — | — |
Azospirillum sp. SherDot2 | 0.61 | MPMX19_02113 | | Dihydrolipoyl dehydrogenase 3 | 0.60 | MPMX19_00690 | | Transketolase 1 | — | — |
Pseudomonas fluorescens FW300-N2C3 | 0.60 | AO356_11880 | | dihydrolipoamide dehydrogenase | 0.51 | AO356_13680 | | transketolase | — | — |
Rhodospirillum rubrum S1H | 0.60 | Rru_A1215 | | Dihydrolipoamide dehydrogenase (NCBI) | 0.58 | Rru_A0595 | | transketolase (NCBI) | — | — |
Pseudomonas fluorescens FW300-N1B4 | 0.60 | Pf1N1B4_1976 | | Dihydrolipoamide dehydrogenase (EC 1.8.1.4) | 0.50 | Pf1N1B4_2397 | | Transketolase (EC 2.2.1.1) | — | — |
Pseudomonas fluorescens FW300-N2E2 | 0.60 | Pf6N2E2_4251 | | Dihydrolipoamide dehydrogenase (EC 1.8.1.4) | 0.51 | Pf6N2E2_4655 | | Transketolase (EC 2.2.1.1) | — | — |
Pseudomonas sp. RS175 | 0.60 | PFR28_04545 | | Dihydrolipoyl dehydrogenase 3 | 0.51 | PFR28_04188 | | Transketolase 1 | — | — |
Pseudomonas fluorescens GW456-L13 | 0.59 | PfGW456L13_698 | | Dihydrolipoamide dehydrogenase (EC 1.8.1.4) | 0.48 | PfGW456L13_1064 | | Transketolase (EC 2.2.1.1) | — | — |
Brevundimonas sp. GW460-12-10-14-LB2 | 0.59 | A4249_RS12115 | | dihydrolipoyl dehydrogenase | 0.57 | A4249_RS00780 | | transketolase | — | — |
Magnetospirillum magneticum AMB-1 | 0.59 | AMB_RS20050 | | dihydrolipoyl dehydrogenase | 0.56 | AMB_RS06990 | | transketolase | — | — |
Pseudomonas sp. S08-1 | 0.59 | OH686_23900 | | dihydrolipoyl dehydrogenase | 0.50 | OH686_10770 | | transketolase | — | — |
Pseudomonas putida KT2440 | 0.58 | PP_5366 | | dihydrolipoyl dehydrogenase | 0.50 | PP_4965 | | transketolase A | — | — |
Sphingomonas koreensis DSMZ 15582 | 0.56 | Ga0059261_1343 | | dihydrolipoamide dehydrogenase (EC 1.8.1.4) | 0.51 | Ga0059261_0731 | | transketolase, bacterial and yeast | — | — |
Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.55 | ABZR88_RS16575 | | dihydrolipoyl dehydrogenase | 0.43 | ABZR88_RS02950 | | transketolase | — | — |
Dechlorosoma suillum PS | 0.51 | Dsui_2219 | | dihydrolipoamide dehydrogenase | 0.49 | Dsui_1561 | | transketolase | — | — |
Paraburkholderia graminis OAS925 | 0.50 | ABIE53_002451 | | dihydrolipoamide dehydrogenase | 0.48 | ABIE53_003537 | | transketolase | — | — |
Paraburkholderia sabiae LMG 24235 | 0.50 | QEN71_RS23050 | | dihydrolipoyl dehydrogenase | 0.48 | QEN71_RS27010 | | transketolase | — | — |
Paraburkholderia bryophila 376MFSha3.1 | 0.50 | H281DRAFT_05115 | | dihydrolipoamide dehydrogenase | 0.48 | H281DRAFT_01312 | | transketolase | — | — |
Castellaniella sp019104865 MT123 | 0.50 | ABCV34_RS01730 | | dihydrolipoyl dehydrogenase | 0.48 | ABCV34_RS15450 | | transketolase | — | — |
Pseudomonas stutzeri RCH2 | 0.50 | Psest_2492 | | dihydrolipoamide dehydrogenase | 0.50 | Psest_0328 | | transketolase, bacterial and yeast | — | — |
Ralstonia solanacearum IBSBF1503 | 0.49 | RALBFv3_RS15590 | | dihydrolipoyl dehydrogenase | 0.49 | RALBFv3_RS05870 | | transketolase | — | — |
Cupriavidus basilensis FW507-4G11 | 0.49 | RR42_RS12930 | | dihydrolipoamide dehydrogenase | 0.49 | RR42_RS17575 | | transketolase | — | — |
Ralstonia solanacearum UW163 | 0.49 | UW163_RS13050 | | dihydrolipoyl dehydrogenase | 0.49 | UW163_RS07755 | | transketolase | — | — |
Burkholderia phytofirmans PsJN | 0.49 | BPHYT_RS08120 | | dihydrolipoamide dehydrogenase | 0.49 | BPHYT_RS16840 | | transketolase | — | — |
Marinobacter adhaerens HP15 | 0.49 | HP15_1523 | | dihydrolipoamide dehydrogenase | 0.48 | HP15_2913 | | bacterial transketolase | — | — |
Ralstonia solanacearum PSI07 | 0.49 | RPSI07_RS17765 | | dihydrolipoyl dehydrogenase | 0.48 | RPSI07_RS11430 | | transketolase | — | — |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.49 | Psyr_2011 | | dihydrolipoamide dehydrogenase | 0.51 | Psyr_4792 | | transketolase | — | — |
Pseudomonas syringae pv. syringae B728a | 0.49 | Psyr_2011 | | dihydrolipoamide dehydrogenase | 0.51 | Psyr_4792 | | transketolase | — | — |
Ralstonia sp. UNC404CL21Col | 0.49 | ABZR87_RS11120 | | dihydrolipoyl dehydrogenase | 0.50 | ABZR87_RS01440 | | transketolase | — | — |
Ralstonia solanacearum GMI1000 | 0.49 | RS_RS06370 | | dihydrolipoyl dehydrogenase | 0.49 | RS_RS13760 | | transketolase | — | — |
Dyella japonica UNC79MFTsu3.2 | 0.49 | ABZR86_RS05930 | | dihydrolipoyl dehydrogenase | 0.47 | ABZR86_RS18655 | | transketolase | — | — |
Pseudomonas fluorescens FW300-N2E3 | 0.48 | AO353_01825 | | dihydrolipoamide dehydrogenase | 0.49 | AO353_07955 | | transketolase | — | — |
Rhodanobacter sp. FW510-T8 | 0.48 | OKGIIK_05930 | lpdA | dihydrolipoyl dehydrogenase | 0.49 | OKGIIK_01095 | tkt | transketolase | — | — |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.48 | GFF4875 | | Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4) | 0.49 | GFF2200 | | Transketolase (EC 2.2.1.1) | — | — |
Variovorax sp. OAS795 | 0.48 | ABID97_RS14155 | | dihydrolipoyl dehydrogenase | 0.46 | ABID97_RS12885 | | transketolase | — | — |
Variovorax sp. SCN45 | 0.48 | GFF981 | | Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4) | 0.44 | GFF7176 | | Transketolase (EC 2.2.1.1) | — | — |
Herbaspirillum seropedicae SmR1 | 0.48 | HSERO_RS14875 | | dihydrolipoamide dehydrogenase | 0.48 | HSERO_RS07115 | | transketolase | — | — |
Pseudomonas fluorescens SBW25-INTG | 0.47 | PFLU_RS08965 | | dihydrolipoyl dehydrogenase | 0.50 | PFLU_RS28095 | | transketolase | — | — |
Rhodanobacter denitrificans FW104-10B01 | 0.47 | LRK54_RS00960 | | dihydrolipoyl dehydrogenase | 0.49 | LRK54_RS05750 | | transketolase | — | — |
Pseudomonas fluorescens SBW25 | 0.47 | PFLU_RS08965 | | dihydrolipoyl dehydrogenase | 0.50 | PFLU_RS28095 | | transketolase | — | — |
Rhodanobacter denitrificans MT42 | 0.47 | LRK55_RS00735 | | dihydrolipoyl dehydrogenase | 0.49 | LRK55_RS05505 | | transketolase | — | — |
Pseudomonas simiae WCS417 | 0.47 | PS417_08905 | | dihydrolipoamide dehydrogenase | 0.50 | PS417_26440 | | transketolase | — | — |
Acidovorax sp. GW101-3H11 | 0.47 | Ac3H11_2465 | | Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4) | 0.48 | Ac3H11_649 | | Transketolase (EC 2.2.1.1) | — | — |
Acinetobacter radioresistens SK82 | 0.46 | MPMX26_00753 | | Dihydrolipoyl dehydrogenase | 0.47 | MPMX26_01775 | | Transketolase 1 | — | — |
Xanthomonas campestris pv. campestris strain 8004 | 0.46 | Xcc-8004.3414.1 | | Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4) | 0.49 | Xcc-8004.1180.1 | | Transketolase (EC 2.2.1.1) | — | — |
Lysobacter sp. OAE881 | 0.45 | ABIE51_RS08980 | | dihydrolipoyl dehydrogenase | 0.49 | ABIE51_RS17120 | | transketolase | — | — |
Shewanella sp. ANA-3 | 0.38 | Shewana3_0428 | | dihydrolipoamide dehydrogenase (RefSeq) | 0.48 | Shewana3_3353 | | transketolase (RefSeq) | — | — |
Shewanella oneidensis MR-1 | 0.38 | SO0426 | lpdA | pyruvate dehydrogenase complex, E3 component, lipoamide dehydrogenase (NCBI ptt file) | 0.47 | SO0930 | tkt | transketolase (NCBI ptt file) | — | — |
Pectobacterium carotovorum WPP14 | 0.38 | HER17_RS03300 | | dihydrolipoyl dehydrogenase | 0.49 | HER17_RS02680 | | transketolase | — | — |
Shewanella loihica PV-4 | 0.37 | Shew_3429 | | dihydrolipoamide dehydrogenase (RefSeq) | 0.48 | Shew_0752 | | transketolase (RefSeq) | — | — |
Shewanella amazonensis SB2B | 0.37 | Sama_0377 | | dihydrolipoamide dehydrogenase (RefSeq) | 0.47 | Sama_2759 | | transketolase (RefSeq) | — | — |
Escherichia coli ECRC100 | 0.37 | OKFHMN_10490 | lpdA | dihydrolipoyl dehydrogenase | 0.50 | OKFHMN_19325 | tkt | transketolase | — | — |
Enterobacter asburiae PDN3 | 0.37 | EX28DRAFT_3712 | | dihydrolipoamide dehydrogenase | 0.49 | EX28DRAFT_2974 | | transketolase, bacterial and yeast | — | — |
Escherichia coli Nissle 1917 | 0.37 | ECOLIN_RS00650 | | dihydrolipoyl dehydrogenase | 0.50 | ECOLIN_RS16330 | | transketolase | — | — |
Escherichia coli ECOR27 | 0.37 | NOLOHH_02835 | lpdA | dihydrolipoyl dehydrogenase | 0.50 | NOLOHH_11230 | tkt | transketolase | — | — |
Dickeya dadantii 3937 | 0.37 | DDA3937_RS17915 | | dihydrolipoyl dehydrogenase | 0.49 | DDA3937_RS18525 | | transketolase | — | — |
Escherichia coli ECOR38 | 0.37 | HEPCGN_08470 | lpdA | dihydrolipoyl dehydrogenase | 0.50 | HEPCGN_18630 | tkt | transketolase | — | — |
Escherichia coli ECRC101 | 0.37 | MCAODC_01005 | lpdA | dihydrolipoyl dehydrogenase | 0.50 | MCAODC_09845 | tkt | transketolase | — | — |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.37 | OHPLBJKB_03545 | | Dihydrolipoyl dehydrogenase | 0.50 | OHPLBJKB_00781 | | Transketolase 1 | — | — |
Escherichia coli ECRC99 | 0.37 | KEDOAH_17665 | lpdA | dihydrolipoyl dehydrogenase | 0.50 | KEDOAH_08815 | tkt | transketolase | — | — |
Dickeya dianthicola 67-19 | 0.37 | HGI48_RS17840 | | dihydrolipoyl dehydrogenase | 0.48 | HGI48_RS18450 | | transketolase | — | — |
Escherichia coli ECRC98 | 0.37 | JDDGAC_14085 | lpdA | dihydrolipoyl dehydrogenase | 0.50 | JDDGAC_22955 | tkt | transketolase | — | — |
Erwinia tracheiphila SCR3 | 0.37 | LU632_RS03090 | lpdA | dihydrolipoyl dehydrogenase | 0.49 | LU632_RS05520 | tkt | transketolase | — | — |
Escherichia coli BW25113 | 0.37 | b0116 | lpd | dihydrolipoamide dehydrogenase (NCBI) | 0.50 | b2935 | tktA | transketolase 1, thiamin-binding (NCBI) | — | — |
Escherichia coli BL21 | 0.37 | ECD_00115 | | dihydrolipoyl dehydrogenase; E3 component of pyruvate and 2-oxoglutarate dehydrogenases complexes; glycine cleavage system L protein; dihydrolipoamide dehydrogenase | 0.50 | ECD_02765 | | transketolase 1, thiamine triphosphate-binding | — | — |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.37 | GFF120 | | Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4) | 0.50 | GFF3028 | | Transketolase (EC 2.2.1.1) | — | — |
Escherichia fergusonii Becca | 0.37 | EFB2_03929 | | Dihydrolipoyl dehydrogenase | 0.50 | EFB2_00966 | | Transketolase 1 | — | — |
Escherichia coli ECRC102 | 0.37 | NIAGMN_08340 | lpdA | dihydrolipoyl dehydrogenase | 0.50 | NIAGMN_17090 | tkt | transketolase | — | — |
Dickeya dianthicola ME23 | 0.37 | DZA65_RS18990 | | dihydrolipoyl dehydrogenase | 0.48 | DZA65_RS19585 | | transketolase | — | — |
Klebsiella michiganensis M5al | 0.36 | BWI76_RS04890 | | dihydrolipoyl dehydrogenase | 0.50 | BWI76_RS24015 | | transketolase | — | — |
Enterobacter sp. TBS_079 | 0.36 | MPMX20_00809 | | Dihydrolipoyl dehydrogenase | 0.49 | MPMX20_03780 | | Transketolase 1 | — | — |
Escherichia coli ECRC62 | 0.36 | BNILDI_08775 | lpdA | dihydrolipoyl dehydrogenase | 0.50 | BNILDI_09775 | tkt | transketolase | — | — |
Vibrio cholerae E7946 ATCC 55056 | 0.36 | CSW01_12210 | | dihydrolipoyl dehydrogenase | 0.49 | CSW01_02515 | | transketolase | — | — |
Serratia liquefaciens MT49 | 0.36 | IAI46_21315 | | dihydrolipoyl dehydrogenase | 0.48 | IAI46_21045 | | transketolase | — | — |
Pantoea sp. MT58 | 0.36 | IAI47_15800 | | dihydrolipoyl dehydrogenase | 0.48 | IAI47_03680 | | transketolase | — | — |
Kangiella aquimarina DSM 16071 | 0.35 | B158DRAFT_2146 | | dihydrolipoamide dehydrogenase | 0.49 | B158DRAFT_0510 | | transketolase, bacterial and yeast | — | — |
Rahnella sp. WP5 | 0.35 | EX31_RS03465 | | dihydrolipoyl dehydrogenase | 0.49 | EX31_RS20285 | | transketolase | — | — |
Alteromonas macleodii MIT1002 | 0.35 | MIT1002_03001 | | Dihydrolipoyl dehydrogenase | 0.49 | MIT1002_00861 | | Transketolase 1 | — | — |
Bifidobacterium breve UCC2003 | 0.27 | BBR_RS13835 | | FAD-dependent oxidoreductase | 0.35 | BBR_RS15580 | | transketolase | — | — |
Desulfovibrio vulgaris Hildenborough JW710 | 0.24 | DVU1423 | lpdA | 2-oxoglutarate dehydrogenase, E3 component, lipoamide dehydrogenase (TIGR) | 0.47 | DVU2530 | tkt | transketolase (TIGR) | — | — |
Not shown: 9 genomes with orthologs for TX73_000960 only; 9 genomes with orthologs for TX73_024110 only