Conservation of cofitness between Psyr_3442 and Psyr_3457 in Pseudomonas syringae pv. syringae B728a

91 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_3442 Flagellar biosynthesis protein FliR 1.0 Psyr_3457 Flagellar FliF M-ring protein 0.81 4
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_3442 Flagellar biosynthesis protein FliR 1.00 Psyr_3457 Flagellar FliF M-ring protein 0.47 56
Pseudomonas fluorescens FW300-N2C3 0.82 AO356_03760 flagellar biosynthetic protein FliR 0.83 AO356_03835 flagellar M-ring protein FliF 0.95 2
Pseudomonas fluorescens FW300-N2E2 0.81 Pf6N2E2_2578 Flagellar biosynthesis protein FliR 0.83 Pf6N2E2_2593 Flagellar M-ring protein FliF 0.55 37
Pseudomonas orientalis W4I3 0.80 QF045_RS21860 flagellar biosynthetic protein FliR 0.81 QF045_RS21935 flagellar basal-body MS-ring/collar protein FliF low > 93
Pseudomonas fluorescens SBW25-INTG 0.80 PFLU_RS21700 flagellar type III secretion system protein FliR 0.81 PFLU_RS21775 flagellar basal body M-ring protein FliF 0.90 22
Pseudomonas fluorescens SBW25 0.80 PFLU_RS21700 flagellar type III secretion system protein FliR 0.81 PFLU_RS21775 flagellar basal body M-ring protein FliF 0.81 27
Pseudomonas lactucae CFBP13502 0.80 GEMAOFIL_04144 Flagellar biosynthetic protein FliR 0.82 GEMAOFIL_04159 Flagellar M-ring protein 0.60 55
Pseudomonas simiae WCS417 0.80 PS417_19730 flagellar biosynthesis protein FliR 0.82 PS417_19805 flagellar M-ring protein FliF 0.83 36
Pseudomonas sp. RS175 0.79 PFR28_00847 Flagellar biosynthetic protein FliR 0.83 PFR28_00832 Flagellar M-ring protein 0.94 7
Pseudomonas fluorescens FW300-N2E3 0.79 AO353_18755 flagellar biosynthetic protein FliR 0.84 AO353_18680 flagellar M-ring protein FliF 0.80 12
Pseudomonas fluorescens GW456-L13 0.76 PfGW456L13_4337 Flagellar biosynthesis protein FliR 0.83 PfGW456L13_4353 Flagellar M-ring protein FliF low > 87
Pseudomonas fluorescens FW300-N1B4 0.76 Pf1N1B4_3620 Flagellar biosynthesis protein FliR 0.84 Pf1N1B4_3604 Flagellar M-ring protein FliF low > 87
Pseudomonas sp. DMC3 0.75 GFF2465 Flagellar biosynthetic protein FliR 0.83 GFF2449 Flagellar M-ring protein 0.86 6
Pseudomonas sp. SVBP6 0.74 COO64_RS21205 fliR flagellar biosynthetic protein FliR 0.83 COO64_RS21280 fliF flagellar basal-body MS-ring/collar protein FliF 0.93 4
Pseudomonas segetis P6 0.69 MPMX49_03132 Flagellar biosynthetic protein FliR 0.74 MPMX49_03145 Flagellar M-ring protein 0.97 3
Pseudomonas sp. BP01 0.67 JOY50_RS00610 fliR flagellar biosynthetic protein FliR 0.78 JOY50_RS00685 fliF flagellar basal-body MS-ring/collar protein FliF 0.80 9
Pseudomonas aeruginosa PUPa3 0.67 DQ20_RS47120 fliR;go_component=membrane|0016020||IEA;go_process=protein flagellar biosynthetic protein FliR 0.75 DQ20_RS45890 fliF;go_component=bacterial-type flagellar basal-body MS-ring/collar protein FliF 0.83 9
Pseudomonas aeruginosa PA14 0.67 IKLFDK_06885 flagellar biosynthetic protein FliR 0.75 IKLFDK_05065 flagellar M-ring protein FliF 0.68 3
Pseudomonas aeruginosa MRSN321 0.67 DY961_RS05670 fliR;go_component=membrane|0016020||IEA;go_process=protein flagellar biosynthetic protein FliR 0.75 DY961_RS06945 fliF;go_component=bacterial-type flagellar basal-body MS-ring/collar protein FliF 0.49 18
Pseudomonas putida KT2440 0.64 PP_4353 Flagellar biosynthetic protein fliR 0.78 PP_4369 Flagellar M-ring protein 0.84 23
Pseudomonas sp. S08-1 0.62 OH686_02760 flagellar biosynthetic protein FliR 0.73 OH686_02835 flagellar M-ring protein FliF 0.96 11
Pseudomonas stutzeri RCH2 0.62 Psest_1734 flagellar biosynthetic protein FliR 0.74 Psest_1719 flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) 0.90 6
Marinobacter adhaerens HP15 0.49 HP15_2310 flagellar biosynthesis protein FliR 0.42 HP15_2326 flagellar MS-ring protein 0.90 17
Shewanella sp. ANA-3 0.43 Shewana3_1354 fliR flagellar biosynthesis protein FliR (RefSeq) 0.25 Shewana3_1342 fliF flagellar MS-ring protein (RefSeq) 0.74 14
Shewanella oneidensis MR-1 0.43 SO3216 fliR flagellar biosynthetic protein FliR (NCBI ptt file) 0.25 SO3228 fliF flagellar M-ring protein FliF (NCBI ptt file) 0.78 17
Shewanella loihica PV-4 0.40 Shew_1378 fliR flagellar biosynthesis protein FliR (RefSeq) 0.25 Shew_1366 fliF flagellar MS-ring protein (RefSeq) — —
Shewanella amazonensis SB2B 0.40 Sama_2285 fliR flagellar biosynthesis protein FliR (RefSeq) 0.25 Sama_2297 fliF flagellar MS-ring protein (RefSeq) 0.99 2
Vibrio cholerae E7946 ATCC 55056 0.39 CSW01_10585 flagellar type III secretion system protein FliR 0.21 CSW01_10650 flagellar basal body M-ring protein FliF 0.96 2
Alteromonas macleodii MIT1002 0.36 MIT1002_01097 Flagellar biosynthetic protein FliR 0.26 MIT1002_01085 Flagellar M-ring protein low > 70
Variovorax sp. SCN45 0.35 GFF5738 Flagellar biosynthesis protein FliR 0.24 GFF5750 Flagellar M-ring protein FliF low > 127
Dechlorosoma suillum PS 0.35 Dsui_1744 flagellar biosynthetic protein FliR 0.26 Dsui_1756 flagellar basal-body M-ring protein/flagellar hook-basal body protein FliF 0.91 1
Castellaniella sp019104865 MT123 0.34 ABCV34_RS05705 flagellar biosynthetic protein FliR 0.23 ABCV34_RS05645 flagellar basal-body MS-ring/collar protein FliF — —
Paraburkholderia sabiae LMG 24235 0.33 QEN71_RS28855 flagellar biosynthetic protein FliR 0.25 QEN71_RS28795 flagellar basal-body MS-ring/collar protein FliF 0.96 25
Paraburkholderia graminis OAS925 0.32 ABIE53_000086 flagellar biosynthetic protein FliR 0.27 ABIE53_000074 flagellar M-ring protein FliF 0.99 2
Enterobacter sp. TBS_079 0.32 MPMX20_02947 Flagellar biosynthetic protein FliR 0.23 MPMX20_02935 Flagellar M-ring protein 0.90 7
Burkholderia phytofirmans PsJN 0.32 BPHYT_RS18835 flagellar biosynthesis protein FliR 0.27 BPHYT_RS18775 flagellar M-ring protein FliF 0.56 6
Enterobacter asburiae PDN3 0.32 EX28DRAFT_0604 flagellar biosynthetic protein FliR 0.23 EX28DRAFT_0616 flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) 0.85 4
Dyella japonica UNC79MFTsu3.2 0.31 ABZR86_RS20240 flagellar biosynthetic protein FliR 0.29 ABZR86_RS20170 flagellar basal-body MS-ring/collar protein FliF low > 74
Paraburkholderia bryophila 376MFSha3.1 0.31 H281DRAFT_05774 flagellar biosynthetic protein FliR 0.27 H281DRAFT_05786 flagellar M-ring protein FliF 0.75 4
Herbaspirillum seropedicae SmR1 0.30 HSERO_RS10250 flagellar biosynthesis protein FliR 0.28 HSERO_RS10310 flagellar M-ring protein FliF 0.96 5
Pectobacterium carotovorum WPP14 0.30 HER17_RS08220 flagellar type III secretion system protein FliR 0.21 HER17_RS08280 flagellar M-ring protein FliF 0.95 3
Methylophilus sp. DMC18 0.30 GFF552 Flagellar biosynthetic protein FliR 0.26 GFF540 Flagellar M-ring protein low > 43
Cupriavidus basilensis FW507-4G11 0.30 RR42_RS23350 flagellar biosynthesis protein FliR 0.19 RR42_RS23570 flagellar M-ring protein FliF low > 128
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.30 GFF4006 Flagellar biosynthesis protein FliR 0.23 GFF4018 Flagellar M-ring protein FliF 0.84 18
Ralstonia sp. UNC404CL21Col 0.30 ABZR87_RS22220 flagellar biosynthetic protein FliR 0.25 ABZR87_RS22080 flagellar basal-body MS-ring/collar protein FliF 0.97 4
Rahnella sp. WP5 0.29 EX31_RS09600 flagellar type III secretion system protein FliR 0.26 EX31_RS09540 flagellar basal body M-ring protein FliF 0.50 9
Hydrogenophaga sp. GW460-11-11-14-LB1 0.29 GFF1463 Flagellar biosynthesis protein FliR 0.23 GFF1450 Flagellar M-ring protein FliF — —
Ralstonia solanacearum PSI07 0.29 RPSI07_RS01450 flagellar biosynthetic protein FliR 0.24 RPSI07_RS01535 flagellar basal body M-ring protein FliF low > 81
Xanthomonas campestris pv. campestris strain 8004 0.29 Xcc-8004.2823.1 Flagellar biosynthesis protein FliR 0.25 Xcc-8004.2809.1 Flagellar M-ring protein FliF low > 74
Ralstonia solanacearum IBSBF1503 0.28 RALBFv3_RS21675 flagellar biosynthetic protein FliR 0.25 RALBFv3_RS21590 flagellar basal body M-ring protein FliF low > 76
Acidovorax sp. GW101-3H11 0.28 Ac3H11_1416 Flagellar biosynthesis protein FliR 0.24 Ac3H11_1404 Flagellar M-ring protein FliF 0.60 3
Ralstonia solanacearum UW163 0.28 UW163_RS17510 flagellar biosynthetic protein FliR 0.25 UW163_RS17600 flagellar basal body M-ring protein FliF — —
Escherichia coli ECRC99 0.28 KEDOAH_02440 fliR flagellar type III secretion system protein FliR 0.24 KEDOAH_02380 fliF flagellar M-ring protein FliF — —
Escherichia coli ECRC102 0.28 NIAGMN_02400 fliR flagellar type III secretion system protein FliR 0.24 NIAGMN_02340 fliF flagellar M-ring protein FliF low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.28 OHPLBJKB_01779 hypothetical protein 0.24 OHPLBJKB_01791 Flagellar M-ring protein — —
Escherichia coli ECRC101 0.28 MCAODC_19740 fliR flagellar type III secretion system protein FliR 0.24 MCAODC_19680 fliF flagellar M-ring protein FliF 0.39 5
Escherichia coli ECRC98 0.28 JDDGAC_00240 fliR flagellar type III secretion system protein FliR 0.24 JDDGAC_00300 fliF flagellar M-ring protein FliF low > 87
Escherichia coli ECRC100 0.28 OKFHMN_25655 fliR flagellar type III secretion system protein FliR 0.24 OKFHMN_25715 fliF flagellar M-ring protein FliF low > 79
Dickeya dianthicola 67-19 0.28 HGI48_RS13470 flagellar type III secretion system protein FliR 0.23 HGI48_RS13410 flagellar M-ring protein FliF 0.97 1
Escherichia coli BW25113 0.28 b1950 fliR flagellar biosynthesis protein R (NCBI) 0.24 b1938 fliF flagellar M-ring protein (NCBI) 0.36 7
Escherichia coli ECOR27 0.28 NOLOHH_16285 fliR flagellar type III secretion system protein FliR 0.24 NOLOHH_16345 fliF flagellar M-ring protein FliF 0.65 10
Dickeya dianthicola ME23 0.28 DZA65_RS13955 flagellar type III secretion system protein FliR 0.23 DZA65_RS13895 flagellar basal body M-ring protein FliF 1.00 1
Ralstonia solanacearum GMI1000 0.28 RS_RS18950 flagellar biosynthetic protein FliR 0.24 RS_RS19035 flagellar basal body M-ring protein FliF low > 80
Escherichia coli ECRC62 0.28 BNILDI_15075 fliR flagellar type III secretion system protein FliR 0.24 BNILDI_15135 fliF flagellar M-ring protein FliF 0.46 52
Escherichia fergusonii Becca 0.27 EFB2_01996 Flagellar biosynthetic protein FliR 0.24 EFB2_02008 Flagellar M-ring protein low > 86
Dickeya dadantii 3937 0.27 DDA3937_RS13425 flagellar type III secretion system protein FliR 0.23 DDA3937_RS13365 flagellar M-ring protein FliF 0.99 3
Rhodanobacter sp000427505 FW510-R12 0.27 LRK53_RS15020 flagellar biosynthetic protein FliR 0.23 LRK53_RS15080 flagellar M-ring protein FliF low > 59
Pantoea sp. MT58 0.27 IAI47_07970 flagellar type III secretion system protein FliR 0.23 IAI47_08030 flagellar M-ring protein FliF 0.87 12
Pantoea agglomerans CFBP13505 P0401 0.27 PagCFBP13505_RS01880 flagellar type III secretion system protein FliR 0.23 PagCFBP13505_RS01940 flagellar basal body M-ring protein FliF 0.96 10
Erwinia amylovora T8 0.26 OLJFJH_15415 flagellar type III secretion system protein FliR 0.25 OLJFJH_09920 flagellar M-ring protein FliF low > 58
Sphingobium sp. HT1-2 0.26 GFF3740 Flagellar biosynthesis protein FliR 0.21 GFF3728 Flagellar M-ring protein FliF low > 95
Rhodanobacter sp. FW510-T8 0.25 OKGIIK_02805 fliR flagellar biosynthetic protein FliR 0.23 OKGIIK_02745 fliF flagellar M-ring protein FliF 0.59 6
Serratia liquefaciens MT49 0.25 IAI46_15900 flagellar type III secretion system protein FliR 0.22 IAI46_15840 flagellar M-ring protein FliF low > 87
Rhodanobacter denitrificans MT42 0.24 LRK55_RS13295 flagellar biosynthetic protein FliR 0.25 LRK55_RS13235 flagellar basal-body MS-ring/collar protein FliF 0.79 20
Escherichia coli ECOR38 0.24 HEPCGN_04015 fliR flagellar type III secretion system protein FliR 0.24 HEPCGN_04075 fliF flagellar M-ring protein FliF low > 88
Rhodanobacter denitrificans FW104-10B01 0.24 LRK54_RS13555 flagellar biosynthetic protein FliR 0.25 LRK54_RS13495 flagellar M-ring protein FliF 0.51 11
Lysobacter sp. OAE881 0.22 ABIE51_RS16840 flagellar biosynthetic protein FliR 0.27 ABIE51_RS16780 flagellar basal-body MS-ring/collar protein FliF 0.96 2
Sphingomonas koreensis DSMZ 15582 0.22 Ga0059261_2060 flagellar biosynthetic protein FliR 0.17 Ga0059261_2072 flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) 0.65 17
Rhodopseudomonas palustris CGA009 0.20 TX73_020140 flagellar biosynthetic protein FliR 0.18 TX73_006490 flagellar basal-body MS-ring/collar protein FliF 0.96 5
Brevundimonas sp. GW460-12-10-14-LB2 0.18 A4249_RS15230 flagellar biosynthetic protein FliR 0.16 A4249_RS09785 flagellar basal-body MS-ring/collar protein FliF low > 48
Desulfovibrio vulgaris Miyazaki F 0.18 DvMF_2016 flagellar biosynthetic protein FliR (RefSeq) 0.18 DvMF_2287 flagellar M-ring protein FliF (RefSeq) 0.94 6
Agrobacterium fabrum C58 0.17 Atu0582 flagellar biosynthetic protein FLIR 0.11 Atu0523 flagellar M-ring protein 0.96 8
Desulfovibrio vulgaris Hildenborough JW710 0.17 DVU3234 flagellar biosynthetic protein FliR (TIGR) 0.19 DVU0313 fliF flagellar M-ring protein FliF (TIGR) 0.94 8
Caulobacter crescentus NA1000 0.16 CCNA_01130 flagellar biosynthesis protein FliR 0.15 CCNA_00950 flagellar M-ring protein FliF 0.88 13
Caulobacter crescentus NA1000 Δfur 0.16 CCNA_01130 flagellar biosynthesis protein FliR 0.15 CCNA_00950 flagellar M-ring protein FliF low > 67
Sinorhizobium meliloti 1021 0.15 SMc03055 flagellar biosynthesis protein FliR 0.13 SMc03014 flagellar MS-ring protein 0.30 11
Rhodospirillum rubrum S1H 0.15 Rru_A2822 Flagellar biosynthesis protein FliR (NCBI) 0.19 Rru_A0545 Flagellar FliF M-ring protein (NCBI) low > 58
Magnetospirillum magneticum AMB-1 0.14 AMB_RS03185 flagellar type III secretion system protein FliR 0.18 AMB_RS02590 flagellar M-ring protein FliF low > 64
Rhizobium sp. OAE497 0.13 ABIE40_RS03115 flagellar biosynthetic protein FliR 0.12 ABIE40_RS02910 flagellar basal-body MS-ring/collar protein FliF low > 107
Dinoroseobacter shibae DFL-12 0.11 Dshi_3257 type III secretion system inner membrane R protein (RefSeq) 0.09 Dshi_3264 flagellar M-ring protein FliF (RefSeq) 0.35 51
Xanthobacter sp. DMC5 0.10 GFF4512 hypothetical protein 0.13 GFF4482 Flagellar M-ring protein — —

Not shown: 5 genomes with orthologs for Psyr_3442 only; 2 genomes with orthologs for Psyr_3457 only