Conservation of cofitness between Psyr_0471 and Psyr_2066 in Pseudomonas syringae pv. syringae B728a

86 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_0471 coproporphyrinogen III oxidase, anaerobic 1.0 Psyr_2066 Protein of unknown function DUF214:Fimbrial assembly 0.31 19
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_0471 coproporphyrinogen III oxidase, anaerobic 1.00 Psyr_2066 Protein of unknown function DUF214:Fimbrial assembly low > 86
Pseudomonas fluorescens FW300-N1B4 0.83 Pf1N1B4_2334 Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB 0.77 Pf1N1B4_297 FIG00809136: hypothetical protein low > 87
Pseudomonas fluorescens FW300-N2E3 0.82 AO353_08200 coproporphyrinogen III oxidase 0.75 AO353_18995 ABC transporter permease low > 101
Pseudomonas fluorescens GW456-L13 0.81 PfGW456L13_1003 Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB 0.76 PfGW456L13_2217 FIG00809136: hypothetical protein low > 87
Pseudomonas simiae WCS417 0.81 PS417_26760 oxidase 0.79 PS417_08395 ABC transporter permease low > 88
Pseudomonas fluorescens SBW25 0.81 PFLU_RS28405 radical SAM family heme chaperone HemW 0.75 PFLU_RS08345 ABC transporter permease low > 109
Pseudomonas fluorescens SBW25-INTG 0.81 PFLU_RS28405 radical SAM family heme chaperone HemW 0.75 PFLU_RS08345 ABC transporter permease low > 109
Pseudomonas fluorescens FW300-N2C3 0.78 AO356_13390 coproporphyrinogen III oxidase 0.76 AO356_03235 ABC transporter permease low > 104
Pseudomonas fluorescens FW300-N2E2 0.78 Pf6N2E2_4593 Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB 0.76 Pf6N2E2_2478 FIG00809136: hypothetical protein low > 103
Pseudomonas sp. RS175 0.77 PFR28_04249 Heme chaperone HemW 0.78 PFR28_00956 hypothetical protein low > 88
Pseudomonas sp. S08-1 0.74 OH686_11020 Oxygen-independent coproporphyrinogen-III oxidase-like protein YggW 0.67 OH686_01800 ABC transporter, fused permease protein low > 80
Pseudomonas putida KT2440 0.73 PP_5101 coproporphyrinogen/heterocyclic compound oxidase (aerobic) 0.68 PP_2316 putative ABC transporter, permease protein low > 96
Pseudomonas stutzeri RCH2 0.71 Psest_0276 putative oxygen-independent coproporphyrinogen III oxidase 0.69 Psest_2338 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component low > 67
Kangiella aquimarina DSM 16071 0.52 B158DRAFT_0201 coproporphyrinogen III oxidase, anaerobic (EC 1.3.99.22) 0.34 B158DRAFT_2226 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component low > 40
Serratia liquefaciens MT49 0.52 IAI46_21435 radical SAM family heme chaperone HemW 0.22 IAI46_05355 ABC transporter permease low > 86
Vibrio cholerae E7946 ATCC 55056 0.52 CSW01_02425 YggW family oxidoreductase 0.19 CSW01_18080 ABC transporter permease low > 62
Shewanella sp. ANA-3 0.51 Shewana3_1188 putative oxygen-independent coproporphyrinogen III oxidase (RefSeq) 0.24 Shewana3_1539 hypothetical protein (RefSeq) low > 73
Pectobacterium carotovorum WPP14 0.51 HER17_RS03785 radical SAM family heme chaperone HemW 0.23 HER17_RS15490 ABC transporter permease low > 75
Pantoea sp. MT58 0.51 IAI47_03580 radical SAM family heme chaperone HemW 0.11 IAI47_14360 ABC transporter permease low > 76
Shewanella amazonensis SB2B 0.51 Sama_2483 oxygen-independent coproporphyrinogen III oxidase, putative (RefSeq) 0.24 Sama_1487 ABC transporter, permease, putative (RefSeq) low > 62
Enterobacter sp. TBS_079 0.51 MPMX20_03813 Heme chaperone HemW 0.25 MPMX20_01094 hypothetical protein low > 85
Escherichia coli ECOR38 0.51 HEPCGN_18540 hemW radical SAM family heme chaperone HemW 0.24 HEPCGN_06595 ybbP Uncharacterized ABC transporter permease YbbP low > 87
Escherichia coli BL21 0.51 ECD_02785 HemN family putative oxidoreductase 0.23 ECD_00447 putative ABC transporter permease low > 61
Dickeya dianthicola 67-19 0.51 HGI48_RS17370 radical SAM family heme chaperone HemW 0.22 HGI48_RS06020 ABC transporter permease low > 71
Escherichia fergusonii Becca 0.51 EFB2_00947 Heme chaperone HemW 0.24 EFB2_03559 hypothetical protein low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.51 OHPLBJKB_00761 Oxygen-independent coproporphyrinogen-III oxidase-like protein YqeR 0.24 OHPLBJKB_03178 hypothetical protein low > 73
Escherichia coli ECRC101 0.51 MCAODC_09755 hemW radical SAM family heme chaperone HemW 0.24 MCAODC_27180 ybbP Uncharacterized ABC transporter permease YbbP low > 87
Enterobacter asburiae PDN3 0.51 EX28DRAFT_2993 putative oxygen-independent coproporphyrinogen III oxidase 0.26 EX28DRAFT_2463 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component low > 76
Escherichia coli ECRC100 0.51 OKFHMN_19235 hemW radical SAM family heme chaperone HemW 0.24 OKFHMN_07965 ybbP Uncharacterized ABC transporter permease YbbP low > 80
Erwinia tracheiphila SCR3 0.51 LU632_RS05445 hemW radical SAM family heme chaperone HemW 0.23 LU632_RS15255 ABC transporter permease low > 74
Escherichia coli ECRC99 0.51 KEDOAH_08905 hemW radical SAM family heme chaperone HemW 0.24 KEDOAH_20005 ybbP Uncharacterized ABC transporter permease YbbP
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.51 GFF3058 Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB 0.23 GFF4414 FIG00809136: hypothetical protein low > 78
Escherichia coli ECRC98 0.51 JDDGAC_22865 hemW radical SAM family heme chaperone HemW 0.24 JDDGAC_11610 ybbP Uncharacterized ABC transporter permease YbbP low > 86
Escherichia coli ECRC62 0.51 BNILDI_09685 hemW radical SAM family heme chaperone HemW 0.24 BNILDI_22375 ybbP Uncharacterized ABC transporter permease YbbP low > 75
Escherichia coli ECRC102 0.51 NIAGMN_17000 hemW radical SAM family heme chaperone HemW 0.24 NIAGMN_06015 ybbP Uncharacterized ABC transporter permease YbbP
Escherichia coli ECOR27 0.50 NOLOHH_11105 hemW radical SAM family heme chaperone HemW 0.24 NOLOHH_00955 ybbP Uncharacterized ABC transporter permease YbbP low > 75
Dickeya dianthicola ME23 0.50 DZA65_RS18460 radical SAM family heme chaperone HemW 0.23 DZA65_RS06365 ABC transporter permease low > 75
Escherichia coli BW25113 0.50 b2955 yggW coproporphyrinogen III oxidase (NCBI) 0.24 b0496 ybbP predicted inner membrane protein (NCBI) low > 76
Shewanella oneidensis MR-1 0.50 SO3359 oxygen-independent coproporphyrinogen III oxidase, putative (NCBI ptt file) 0.23 SO2926 ABC transporter, permease, putative (NCBI ptt file) low > 76
Escherichia coli Nissle 1917 0.50 ECOLIN_RS16435 radical SAM family heme chaperone HemW 0.24 ECOLIN_RS02930 putative ABC transporter permease subunit YbbP low > 55
Shewanella loihica PV-4 0.50 Shew_1131 putative oxygen-independent coproporphyrinogen III oxidase (RefSeq) 0.22 Shew_2401 hypothetical protein (RefSeq) low > 60
Dickeya dadantii 3937 0.50 DDA3937_RS17325 radical SAM family heme chaperone HemW 0.21 DDA3937_RS05970 ABC transporter permease low > 74
Rahnella sp. WP5 0.50 EX31_RS02710 radical SAM family heme chaperone HemW 0.25 EX31_RS22615 ABC transporter permease low > 89
Klebsiella michiganensis M5al 0.49 BWI76_RS24120 YggW family oxidoreductase 0.23 BWI76_RS06955 sugar ABC transporter permease low > 92
Alteromonas macleodii MIT1002 0.49 MIT1002_00939 Oxygen-independent coproporphyrinogen-III oxidase 1 0.29 MIT1002_01416 outer membrane-specific lipoprotein transporter subunit LolE low > 70
Herbaspirillum seropedicae SmR1 0.49 HSERO_RS10665 coproporphyrinogen III oxidase 0.27 HSERO_RS09380 ABC transporter permease low > 78
Rhodanobacter denitrificans MT42 0.49 LRK55_RS11460 radical SAM family heme chaperone HemW 0.19 LRK55_RS03875 FtsX-like permease family protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.49 LRK54_RS11735 radical SAM family heme chaperone HemW 0.19 LRK54_RS04105 FtsX-like permease family protein low > 59
Dyella japonica UNC79MFTsu3.2 0.48 ABZR86_RS11910 radical SAM family heme chaperone HemW 0.12 ABZR86_RS10175 FtsX-like permease family protein low > 74
Lysobacter sp. OAE881 0.48 ABIE51_RS17300 radical SAM family heme chaperone HemW 0.26 ABIE51_RS18495 FtsX-like permease family protein low > 62
Dechlorosoma suillum PS 0.48 Dsui_0491 putative oxygen-independent coproporphyrinogen III oxidase 0.32 Dsui_2415 putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component low > 51
Xanthomonas campestris pv. campestris strain 8004 0.48 Xcc-8004.1224.1 Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB 0.24 Xcc-8004.4289.1 ABC transporter, permease protein, putative low > 74
Paraburkholderia graminis OAS925 0.47 ABIE53_003236 putative oxygen-independent coproporphyrinogen III oxidase 0.27 ABIE53_001560 putative ABC transport system permease protein low > 113
Paraburkholderia bryophila 376MFSha3.1 0.47 H281DRAFT_04010 oxygen-independent coproporphyrinogen-3 oxidase 0.26 H281DRAFT_04537 putative ABC transport system permease protein low > 103
Ralstonia solanacearum PSI07 0.47 RPSI07_RS13830 oxygen-independent coproporphyrinogen III oxidase-like protein 0.28 RPSI07_RS14190 ABC transporter permease low > 81
Marinobacter adhaerens HP15 0.47 HP15_280 putative oxygen-independent coproporphyrinogen III oxidase 0.26 HP15_1386 ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component low > 73
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS03635 radical SAM family heme chaperone HemW 0.26 QEN71_RS24320 ABC transporter permease low > 153
Rhodanobacter sp. FW510-T8 0.47 OKGIIK_12160 hemW radical SAM family heme chaperone HemW 0.18 OKGIIK_10965 ybbP ABC transporter permease low > 52
Cupriavidus basilensis FW507-4G11 0.47 RR42_RS04880 coproporphyrinogen III oxidase 0.26 RR42_RS05370 ABC transporter permease low > 128
Variovorax sp. OAS795 0.47 ABID97_RS23630 radical SAM family heme chaperone HemW 0.25 ABID97_RS07595 FtsX-like permease family protein low > 91
Burkholderia phytofirmans PsJN 0.46 BPHYT_RS15335 coproporphyrinogen III oxidase 0.26 BPHYT_RS06480 ABC transporter permease low > 109
Variovorax sp. SCN45 0.46 GFF2383 Oxygen-independent coproporphyrinogen-III oxidase-like protein YggW 0.26 GFF5663 ABC transporter, fused permease protein low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.46 GFF3256 Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB 0.25 GFF1178 ABC transporter, permease protein, putative low > 90
Ralstonia solanacearum IBSBF1503 0.45 RALBFv3_RS03355 oxygen-independent coproporphyrinogen III oxidase-like protein 0.28 RALBFv3_RS03120 ABC transporter permease low > 76
Ralstonia solanacearum UW163 0.45 UW163_RS10365 oxygen-independent coproporphyrinogen III oxidase-like protein 0.28 UW163_RS10605 ABC transporter permease
Ralstonia sp. UNC404CL21Col 0.44 ABZR87_RS15265 radical SAM family heme chaperone HemW 0.28 ABZR87_RS15020 ABC transporter permease low > 80
Ralstonia solanacearum GMI1000 0.44 RS_RS10840 oxygen-independent coproporphyrinogen III oxidase-like protein 0.27 RS_RS10490 ABC transporter permease low > 80
Acinetobacter radioresistens SK82 0.44 MPMX26_00308 Heme chaperone HemW 0.22 MPMX26_02338 hypothetical protein low > 36
Acidovorax sp. GW101-3H11 0.43 Ac3H11_3672 Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB 0.27 Ac3H11_3795 ABC transporter, permease protein, putative low > 79
Azospirillum sp. SherDot2 0.32 MPMX19_02574 Heme chaperone HemW 0.11 MPMX19_02590 hypothetical protein low > 112
Azospirillum brasilense Sp245 0.31 AZOBR_RS02195 coproporphyrinogen III oxidase 0.13 AZOBR_RS02255 glycosyl transferase family 1 low > 97
Phaeobacter inhibens DSM 17395 0.30 PGA1_c35050 oxygen-independent coproporphyrinogen III oxidase HemN 0.13 PGA1_c26390 ABC transporter, permease protein low > 62
Rhizobium sp. OAE497 0.29 ABIE40_RS01625 radical SAM family heme chaperone HemW 0.12 ABIE40_RS18245 ABC transporter permease
Agrobacterium fabrum C58 0.29 Atu0325 oxygen-independent coproporphyrinogen III oxidase 0.10 Atu2681 hypothetical protein
Dinoroseobacter shibae DFL-12 0.29 Dshi_3460 putative oxygen-independent coproporphyrinogen III oxidase (RefSeq) 0.10 Dshi_2679 protein of unknown function DUF214 (RefSeq) low > 64
Sinorhizobium meliloti 1021 0.28 SMc01147 coproporphyrinogen III oxidase 0.11 SMc03838 hypothetical protein low > 103
Bosea sp. OAE506 0.28 ABIE41_RS03305 radical SAM family heme chaperone HemW 0.11 ABIE41_RS04805 FtsX-like permease family protein low > 77
Rhodospirillum rubrum S1H 0.28 Rru_A3639 Putative oxygen-independent coproporphyrinogen III oxidase (NCBI) 0.04 Rru_A3653 Protein of unknown function DUF214 (NCBI) low > 58
Rhodopseudomonas palustris CGA009 0.28 TX73_001700 radical SAM family heme chaperone HemW 0.12 TX73_001020 ABC transporter permease
Caulobacter crescentus NA1000 Δfur 0.27 CCNA_00144 oxygen-independent coproporphyrinogen-III oxidase 0.04 CCNA_01834 oxidoreductase low > 67
Caulobacter crescentus NA1000 0.27 CCNA_00144 oxygen-independent coproporphyrinogen-III oxidase 0.04 CCNA_01834 oxidoreductase low > 66
Brevundimonas sp. GW460-12-10-14-LB2 0.26 A4249_RS12445 radical SAM family heme chaperone HemW 0.09 A4249_RS05700 ABC transporter permease low > 48
Sphingomonas koreensis DSMZ 15582 0.26 Ga0059261_2753 putative oxygen-independent coproporphyrinogen III oxidase 0.08 Ga0059261_0561 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component low > 68
Echinicola vietnamensis KMM 6221, DSM 17526 0.25 Echvi_0628 putative oxygen-independent coproporphyrinogen III oxidase 0.15 Echvi_1583 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component low > 79
Pontibacter actiniarum KMM 6156, DSM 19842 0.23 CA264_16765 coproporphyrinogen III oxidase 0.14 CA264_05670 ABC transporter permease low > 74
Pedobacter sp. GW460-11-11-14-LB5 0.22 CA265_RS18155 coproporphyrinogen III oxidase 0.15 CA265_RS01135 ABC transporter permease low > 88

Not shown: 12 genomes with orthologs for Psyr_0471 only; 0 genomes with orthologs for Psyr_2066 only