Conservation of cofitness between Psyr_2975 and Psyr_0201 in Pseudomonas syringae pv. syringae B728a

86 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_2975 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 1.0 Psyr_0201 ATP-dependent DNA helicase RecG 0.34 11
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_2975 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 1.00 Psyr_0201 ATP-dependent DNA helicase RecG low > 86
Pseudomonas fluorescens SBW25 0.98 PFLU_RS14570 peroxiredoxin 0.90 PFLU_RS29550 ATP-dependent DNA helicase RecG low > 109
Pseudomonas simiae WCS417 0.98 PS417_14045 alkyl hydroperoxide reductase 0.90 PS417_27870 ATP-dependent DNA helicase RecG 0.28 82
Pseudomonas fluorescens SBW25-INTG 0.98 PFLU_RS14570 peroxiredoxin 0.90 PFLU_RS29550 ATP-dependent DNA helicase RecG low > 109
Pseudomonas fluorescens FW300-N2C3 0.95 AO356_22805 alkyl hydroperoxide reductase 0.88 AO356_12380 ATP-dependent DNA helicase RecG low > 104
Pseudomonas fluorescens FW300-N2E2 0.95 Pf6N2E2_447 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) 0.88 Pf6N2E2_4352 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.42 7
Pseudomonas fluorescens FW300-N1B4 0.95 Pf1N1B4_5011 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) 0.90 Pf1N1B4_2105 ATP-dependent DNA helicase RecG (EC 3.6.1.-) — —
Pseudomonas fluorescens GW456-L13 0.95 PfGW456L13_2927 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) 0.90 PfGW456L13_772 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.28 33
Pseudomonas sp. RS175 0.95 PFR28_02482 Alkyl hydroperoxide reductase C 0.88 PFR28_04435 ATP-dependent DNA helicase RecG low > 88
Pseudomonas fluorescens FW300-N2E3 0.94 AO353_26965 alkyl hydroperoxide reductase 0.90 AO353_09320 ATP-dependent DNA helicase RecG 0.35 12
Pseudomonas putida KT2440 0.88 PP_2439 peroxiredoxin, alkylhydroperoxide reductase - small subunit 0.89 PP_5310 junction-specific ATP-dependent DNA helicase 0.19 37
Azospirillum sp. SherDot2 0.87 MPMX19_05835 Alkyl hydroperoxide reductase C 0.33 MPMX19_00951 ATP-dependent DNA helicase RecG — —
Azospirillum brasilense Sp245 0.86 AZOBR_RS20510 alkyl hydroperoxide reductase subunit C 0.34 AZOBR_RS09850 ATP-dependent DNA helicase RecG low > 97
Rhodanobacter sp. FW510-T8 0.86 OKGIIK_06555 ahpC alkyl hydroperoxide reductase subunit C 0.54 OKGIIK_12090 recG ATP-dependent DNA helicase RecG low > 52
Rhodanobacter denitrificans MT42 0.84 LRK55_RS00480 alkyl hydroperoxide reductase subunit C 0.56 LRK55_RS11530 ATP-dependent DNA helicase RecG low > 63
Rhodanobacter denitrificans FW104-10B01 0.84 LRK54_RS00705 alkyl hydroperoxide reductase subunit C 0.56 LRK54_RS11805 ATP-dependent DNA helicase RecG low > 59
Dyella japonica UNC79MFTsu3.2 0.83 ABZR86_RS08490 alkyl hydroperoxide reductase subunit C 0.55 ABZR86_RS11840 ATP-dependent DNA helicase RecG low > 74
Rhodospirillum rubrum S1H 0.83 Rru_A1418 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (NCBI) 0.29 Rru_A1728 ATP-dependent DNA helicase RecG (NCBI) — —
Herbaspirillum seropedicae SmR1 0.81 HSERO_RS21540 alkyl hydroperoxide reductase subunit C 0.46 HSERO_RS06165 ATP-dependent DNA helicase RecG low > 78
Acinetobacter radioresistens SK82 0.81 MPMX26_02009 Alkyl hydroperoxide reductase C 0.55 MPMX26_02732 ATP-dependent DNA helicase RecG low > 36
Lysobacter sp. OAE881 0.81 ABIE51_RS05485 alkyl hydroperoxide reductase subunit C 0.53 ABIE51_RS17230 ATP-dependent DNA helicase RecG low > 62
Paraburkholderia sabiae LMG 24235 0.79 QEN71_RS13380 alkyl hydroperoxide reductase subunit C 0.47 QEN71_RS26630 ATP-dependent DNA helicase RecG — —
Burkholderia phytofirmans PsJN 0.78 BPHYT_RS26845 alkyl hydroperoxide reductase subunit C 0.48 BPHYT_RS03400 ATP-dependent DNA helicase RecG — —
Castellaniella sp019104865 MT123 0.78 ABCV34_RS09920 alkyl hydroperoxide reductase subunit C 0.43 ABCV34_RS03570 ATP-dependent DNA helicase RecG low > 48
Sphingomonas koreensis DSMZ 15582 0.78 Ga0059261_0155 peroxiredoxin 0.33 Ga0059261_0958 ATP-dependent DNA helicase RecG (EC 3.6.1.-) low > 68
Paraburkholderia graminis OAS925 0.78 ABIE53_005904 peroxiredoxin 0.47 ABIE53_000833 ATP-dependent DNA helicase RecG 0.19 99
Paraburkholderia bryophila 376MFSha3.1 0.78 H281DRAFT_02890 peroxiredoxin (alkyl hydroperoxide reductase subunit C) 0.47 H281DRAFT_04672 ATP-dependent DNA helicase RecG low > 103
Pantoea sp. MT58 0.77 IAI47_06790 alkyl hydroperoxide reductase subunit C 0.55 IAI47_00500 ATP-dependent DNA helicase RecG low > 76
Caulobacter crescentus NA1000 0.76 CCNA_03012 peroxiredoxin 0.33 CCNA_01504 ATP-dependent DNA helicase recG low > 66
Caulobacter crescentus NA1000 Δfur 0.76 CCNA_03012 peroxiredoxin 0.33 CCNA_01504 ATP-dependent DNA helicase recG — —
Pectobacterium carotovorum WPP14 0.75 HER17_RS02545 alkyl hydroperoxide reductase subunit C 0.55 HER17_RS21395 ATP-dependent DNA helicase RecG low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.75 GFF4513 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) 0.55 GFF355 ATP-dependent DNA helicase RecG (EC 3.6.1.-) low > 78
Klebsiella michiganensis M5al 0.75 BWI76_RS07940 alkyl hydroperoxide reductase subunit C 0.55 BWI76_RS27440 DNA helicase RecG low > 92
Escherichia coli ECRC62 0.75 BNILDI_21895 ahpC alkyl hydroperoxide reductase subunit C 0.55 BNILDI_04090 recG ATP-dependent DNA helicase RecG low > 75
Escherichia coli ECRC100 0.75 OKFHMN_07510 ahpC alkyl hydroperoxide reductase subunit C 0.55 OKFHMN_15545 recG ATP-dependent DNA helicase RecG low > 80
Escherichia coli BW25113 0.75 b0605 ahpC alkyl hydroperoxide reductase, C22 subunit (NCBI) 0.55 b3652 recG ATP-dependent DNA helicase (NCBI) 0.31 28
Shewanella loihica PV-4 0.75 Shew_0792 alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (RefSeq) 0.56 Shew_3507 ATP-dependent DNA helicase RecG (RefSeq) 0.54 12
Escherichia coli ECRC101 0.75 MCAODC_26725 ahpC alkyl hydroperoxide reductase subunit C 0.55 MCAODC_06055 recG ATP-dependent DNA helicase RecG low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.75 OHPLBJKB_03100 Alkyl hydroperoxide reductase C 0.55 OHPLBJKB_00049 ATP-dependent DNA helicase RecG low > 73
Escherichia fergusonii Becca 0.75 EFB2_03486 Alkyl hydroperoxide reductase C 0.55 EFB2_00136 ATP-dependent DNA helicase RecG low > 86
Escherichia coli ECRC99 0.75 KEDOAH_20460 ahpC alkyl hydroperoxide reductase subunit C 0.55 KEDOAH_12600 recG ATP-dependent DNA helicase RecG — —
Escherichia coli ECRC98 0.75 JDDGAC_11155 ahpC alkyl hydroperoxide reductase subunit C 0.55 JDDGAC_19170 recG ATP-dependent DNA helicase RecG low > 86
Escherichia coli ECOR27 0.75 NOLOHH_23885 ahpC alkyl hydroperoxide reductase subunit C 0.55 NOLOHH_07425 recG ATP-dependent DNA helicase RecG low > 75
Escherichia coli BL21 0.75 ECD_00574 alkyl hydroperoxide reductase, C22 subunit 0.55 ECD_03509 ATP-dependent DNA helicase low > 61
Escherichia coli ECRC102 0.75 NIAGMN_05565 ahpC alkyl hydroperoxide reductase subunit C 0.55 NIAGMN_13305 recG ATP-dependent DNA helicase RecG — —
Escherichia coli Nissle 1917 0.75 ECOLIN_RS03320 alkyl hydroperoxide reductase subunit C 0.55 ECOLIN_RS20800 ATP-dependent DNA helicase RecG low > 55
Kangiella aquimarina DSM 16071 0.75 B158DRAFT_0278 peroxiredoxin 0.50 B158DRAFT_0566 ATP-dependent DNA helicase RecG (EC 3.6.1.-) low > 40
Escherichia coli ECOR38 0.75 HEPCGN_00770 ahpC alkyl hydroperoxide reductase subunit C 0.55 HEPCGN_14365 recG ATP-dependent DNA helicase RecG 0.72 57
Enterobacter asburiae PDN3 0.74 EX28DRAFT_2350 peroxiredoxin 0.55 EX28DRAFT_3901 ATP-dependent DNA helicase RecG (EC 3.6.1.-) low > 76
Enterobacter sp. TBS_079 0.74 MPMX20_01271 Alkyl hydroperoxide reductase C 0.54 MPMX20_00084 ATP-dependent DNA helicase RecG low > 85
Dickeya dadantii 3937 0.74 DDA3937_RS02515 alkyl hydroperoxide reductase subunit C 0.55 DDA3937_RS00170 ATP-dependent DNA helicase RecG low > 74
Dickeya dianthicola ME23 0.74 DZA65_RS02565 alkyl hydroperoxide reductase subunit C 0.55 DZA65_RS22160 ATP-dependent DNA helicase RecG low > 75
Brevundimonas sp. GW460-12-10-14-LB2 0.74 A4249_RS04540 alkyl hydroperoxide reductase subunit C 0.29 A4249_RS04765 ATP-dependent DNA helicase RecG low > 48
Dickeya dianthicola 67-19 0.74 HGI48_RS02460 alkyl hydroperoxide reductase subunit C 0.55 HGI48_RS21190 ATP-dependent DNA helicase RecG low > 71
Shewanella sp. ANA-3 0.73 Shewana3_3325 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen (RefSeq) 0.57 Shewana3_0348 ATP-dependent DNA helicase RecG (RefSeq) low > 73
Shewanella amazonensis SB2B 0.73 Sama_0617 alkyl hydroperoxide reductase, C subunit (RefSeq) 0.57 Sama_3375 ATP-dependent DNA helicase RecG (RefSeq) 0.33 35
Shewanella oneidensis MR-1 0.73 SO0958 ahpC alkyl hydroperoxide reductase, C subunit (NCBI ptt file) 0.56 SO4364 recG ATP-dependent DNA helicase RecG (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.73 MIT1002_01784 Alkyl hydroperoxide reductase subunit C 0.57 MIT1002_00111 ATP-dependent DNA helicase RecG low > 70
Marinobacter adhaerens HP15 0.72 HP15_3622 peroxiredoxin 0.60 HP15_309 DNA helicase, ATP-dependent, RecG low > 73
Bacteroides thetaiotaomicron VPI-5482 0.72 BT2812 alkyl hydroperoxide reductase C22 protein (NCBI ptt file) 0.33 BT3924 ATP-dependent DNA helicase recG (NCBI ptt file) — —
Parabacteroides merdae CL09T00C40 0.72 HMPREF1078_RS04205 alkyl hydroperoxide reductase subunit C 0.33 HMPREF1078_RS12765 ATP-dependent DNA helicase RecG — —
Pseudomonas stutzeri RCH2 0.70 Psest_1133 peroxiredoxin 0.86 Psest_4192 ATP-dependent DNA helicase RecG — —
Bacteroides stercoris CC31F 0.70 HMPREF1181_RS02155 peroxiredoxin 0.34 HMPREF1181_RS06615 ATP-dependent DNA helicase RecG low > 56
Pseudomonas sp. S08-1 0.68 OH686_18680 peroxiredoxin 0.84 OH686_13505 ATP-dependent DNA helicase RecG low > 80
Phocaeicola dorei CL03T12C01 0.68 ABI39_RS03995 peroxiredoxin 0.35 ABI39_RS02470 ATP-dependent DNA helicase RecG low > 72
Phocaeicola vulgatus CL09T03C04 0.68 HMPREF1058_RS09540 peroxiredoxin 0.35 HMPREF1058_RS08295 ATP-dependent DNA helicase RecG low > 67
Xanthomonas campestris pv. campestris strain 8004 0.68 Xcc-8004.4221.1 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) 0.52 Xcc-8004.1204.1 ATP-dependent DNA helicase RecG (EC 3.6.1.-) low > 74
Ralstonia solanacearum PSI07 0.68 RPSI07_RS00930 peroxiredoxin 0.46 RPSI07_RS11625 DNA helicase RecG low > 81
Ralstonia solanacearum GMI1000 0.67 RS_RS18335 peroxiredoxin 0.46 RS_RS13565 DNA helicase RecG — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.67 GFF3914 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) 0.43 GFF2802 ATP-dependent DNA helicase RecG (EC 3.6.1.-) low > 90
Ralstonia solanacearum IBSBF1503 0.67 RALBFv3_RS22270 peroxiredoxin 0.46 RALBFv3_RS05675 DNA helicase RecG low > 76
Ralstonia solanacearum UW163 0.67 UW163_RS22815 peroxiredoxin 0.46 UW163_RS07950 DNA helicase RecG — —
Variovorax sp. OAS795 0.67 ABID97_RS10800 alkyl hydroperoxide reductase subunit C 0.41 ABID97_RS01575 ATP-dependent DNA helicase RecG low > 91
Variovorax sp. SCN45 0.67 GFF2826 Alkyl hydroperoxide reductase protein C (EC 1.11.1.15) 0.39 GFF5538 ATP-dependent DNA helicase RecG (EC 3.6.4.12) 0.78 76
Dechlorosoma suillum PS 0.66 Dsui_1901 peroxiredoxin 0.45 Dsui_0311 ATP-dependent DNA helicase RecG low > 51
Ralstonia sp. UNC404CL21Col 0.66 ABZR87_RS17235 alkyl hydroperoxide reductase subunit C 0.46 ABZR87_RS01270 ATP-dependent DNA helicase RecG 0.54 50
Acidovorax sp. GW101-3H11 0.63 Ac3H11_233 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) 0.44 Ac3H11_781 ATP-dependent DNA helicase RecG (EC 3.6.1.-) — —
Fusobacterium nucleatum SB010 0.61 HUW76_10130 peroxiredoxin 0.35 HUW76_01465 ATP-dependent DNA helicase RecG low > 35
Synechococcus elongatus PCC 7942 0.40 Synpcc7942_2309 2-cys prx thioredoxin peroxidase 0.34 Synpcc7942_1079 recG ATP-dependent DNA helicase RecG — —
Vibrio cholerae E7946 ATCC 55056 0.37 CSW01_03815 peroxidase 0.54 CSW01_13680 DNA helicase RecG low > 62
Serratia liquefaciens MT49 0.36 IAI46_04825 peroxiredoxin C 0.55 IAI46_24905 ATP-dependent DNA helicase RecG low > 86
Erwinia tracheiphila SCR3 0.35 LU632_RS18475 peroxiredoxin C 0.56 LU632_RS22190 recG ATP-dependent DNA helicase RecG low > 74
Pontibacter actiniarum KMM 6156, DSM 19842 0.35 CA264_00400 alkyl hydroperoxide reductase 0.33 CA264_15020 DNA helicase RecG low > 74
Rahnella sp. WP5 0.35 EX31_RS22080 peroxiredoxin C 0.55 EX31_RS15820 ATP-dependent DNA helicase RecG low > 89
Echinicola vietnamensis KMM 6221, DSM 17526 0.32 Echvi_1832 Peroxiredoxin 0.31 Echvi_1162 ATP-dependent DNA helicase RecG low > 79
Cupriavidus basilensis FW507-4G11 0.27 RR42_RS07870 alkyl hydroperoxide reductase 0.46 RR42_RS17390 ATP-dependent DNA helicase RecG low > 128

Not shown: 4 genomes with orthologs for Psyr_2975 only; 11 genomes with orthologs for Psyr_0201 only