| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas fluorescens FW300-N1B4 | 1.0 | Pf1N1B4_602 | | NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) | 1.0 | Pf1N1B4_3081 | | [Protein-PII] uridylyltransferase (EC 2.7.7.59) | 0.56 | 5 |
| Pseudomonas fluorescens FW300-N2E3 | 0.98 | AO353_03425 | | glyceraldehyde-3-phosphate dehydrogenase | 0.96 | AO353_16450 | | protein-PII uridylyltransferase | 0.34 | 21 |
| Pseudomonas fluorescens GW456-L13 | 0.98 | PfGW456L13_1888 | | NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) | 0.97 | PfGW456L13_4711 | | [Protein-PII] uridylyltransferase (EC 2.7.7.59) | low | > 87 |
| Pseudomonas fluorescens FW300-N2C3 | 0.97 | AO356_05225 | | glyceraldehyde-3-phosphate dehydrogenase | 0.95 | AO356_06050 | | protein-PII uridylyltransferase | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.97 | Pf6N2E2_2899 | | NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) | 0.95 | Pf6N2E2_3072 | | [Protein-PII] uridylyltransferase (EC 2.7.7.59) | 0.62 | 3 |
| Pseudomonas sp. DMC3 | 0.97 | GFF5153 | | Glyceraldehyde-3-phosphate dehydrogenase 1 | 0.97 | GFF2051 | | Bifunctional uridylyltransferase/uridylyl-removing enzyme | low | > 89 |
| Pseudomonas sp. RS175 | 0.97 | PFR28_00560 | | Glyceraldehyde-3-phosphate dehydrogenase 1 | 0.93 | PFR28_00394 | | Bifunctional uridylyltransferase/uridylyl-removing enzyme | 0.30 | 44 |
| Pseudomonas fluorescens SBW25 | 0.96 | PFLU_RS24335 | | type I glyceraldehyde-3-phosphate dehydrogenase | 0.96 | PFLU_RS06265 | | [protein-PII] uridylyltransferase | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.96 | PFLU_RS24335 | | type I glyceraldehyde-3-phosphate dehydrogenase | 0.96 | PFLU_RS06265 | | [protein-PII] uridylyltransferase | low | > 109 |
| Pseudomonas simiae WCS417 | 0.96 | PS417_22695 | | glyceraldehyde-3-phosphate dehydrogenase | 0.96 | PS417_06200 | | protein-PII uridylyltransferase | 0.21 | 80 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.90 | Psyr_1108 | | glyceraldehyde-3-phosphate dehydrogenase | 0.88 | Psyr_1341 | | Protein-P-II uridylyltransferase | 0.62 | 27 |
| Pseudomonas syringae pv. syringae B728a | 0.90 | Psyr_1108 | | glyceraldehyde-3-phosphate dehydrogenase | 0.88 | Psyr_1341 | | Protein-P-II uridylyltransferase | 0.42 | 71 |
| Pseudomonas sp. SVBP6 | 0.89 | COO64_RS04530 | gap | type I glyceraldehyde-3-phosphate dehydrogenase | 0.91 | COO64_RS19630 | | [protein-PII] uridylyltransferase | low | > 93 |
| Pseudomonas putida KT2440 | 0.86 | PP_1009 | | glyceraldehyde-3-phosphate dehydrogenase | 0.87 | PP_1589 | | uridylyltransferase | low | > 96 |
| Pseudomonas sp. BP01 | 0.86 | JOY50_RS11385 | gap | type I glyceraldehyde-3-phosphate dehydrogenase | 0.87 | JOY50_RS26180 | | [protein-PII] uridylyltransferase | low | > 84 |
| Pseudomonas aeruginosa PA14 | 0.78 | IKLFDK_16235 | | type I glyceraldehyde-3-phosphate dehydrogenase | 0.82 | IKLFDK_18680 | | [protein-PII] uridylyltransferase | low | > 101 |
| Marinobacter adhaerens HP15 | 0.73 | HP15_2175 | | glyceraldehyde-3-phosphate dehydrogenase, type I | 0.50 | HP15_1163 | | [protein-PII] uridylyltransferase | low | > 73 |
| Paraburkholderia sabiae LMG 24235 | 0.67 | QEN71_RS27005 | | type I glyceraldehyde-3-phosphate dehydrogenase | 0.31 | QEN71_RS06410 | | [protein-PII] uridylyltransferase | low | > 153 |
| Shewanella loihica PV-4 | 0.66 | Shew_2002 | | glyceraldehyde-3-phosphate dehydrogenase, type I (RefSeq) | 0.36 | Shew_2637 | | PII uridylyl-transferase (RefSeq) | — | — |
| Herbaspirillum seropedicae SmR1 | 0.66 | HSERO_RS07125 | | glyceraldehyde-3-phosphate dehydrogenase | 0.34 | HSERO_RS10865 | | PII uridylyl-transferase | — | — |
| Burkholderia phytofirmans PsJN | 0.65 | BPHYT_RS16835 | | glyceraldehyde-3-phosphate dehydrogenase | 0.32 | BPHYT_RS12150 | | PII uridylyl-transferase | 0.69 | 56 |
| Paraburkholderia graminis OAS925 | 0.65 | ABIE53_003536 | | glyceraldehyde 3-phosphate dehydrogenase | 0.31 | ABIE53_002507 | | [protein-PII] uridylyltransferase | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.65 | H281DRAFT_06315 | | glyceraldehyde-3-phosphate dehydrogenase (NAD+) | 0.32 | H281DRAFT_00608 | | UTP--GlnB (protein PII) uridylyltransferase, GlnD | low | > 103 |
| Shewanella sp. ANA-3 | 0.64 | Shewana3_2124 | | glyceraldehyde-3-phosphate dehydrogenase (RefSeq) | 0.36 | Shewana3_2817 | | PII uridylyl-transferase (RefSeq) | — | — |
| Shewanella oneidensis MR-1 | 0.64 | SO2345 | gapA-2 | glyceraldehyde 3-phosphate dehydrogenase (NCBI ptt file) | 0.36 | SO1626 | glnD | protein-P-II uridylyltransferase (NCBI ptt file) | — | — |
| Castellaniella sp019104865 MT123 | 0.64 | ABCV34_RS15455 | | type I glyceraldehyde-3-phosphate dehydrogenase | 0.30 | ABCV34_RS04120 | | [protein-PII] uridylyltransferase | — | — |
| Shewanella amazonensis SB2B | 0.64 | Sama_1808 | | glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (RefSeq) | 0.37 | Sama_1137 | | PII uridylyl-transferase (RefSeq) | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.62 | ABZR86_RS18615 | | type I glyceraldehyde-3-phosphate dehydrogenase | 0.31 | ABZR86_RS21575 | | [protein-PII] uridylyltransferase | low | > 74 |
| Sinorhizobium meliloti 1021 | 0.59 | SMc03979 | | glyceraldehyde-3-phosphate dehydrogenase | 0.23 | SMc01124 | | PII uridylyl-transferase | 0.57 | 101 |
| Kangiella aquimarina DSM 16071 | 0.58 | B158DRAFT_0511 | | glyceraldehyde-3-phosphate dehydrogenase (NAD+) (EC 1.2.1.12) | 0.38 | B158DRAFT_1072 | | UTP--GlnB (protein PII) uridylyltransferase, GlnD | — | — |
| Rhodospirillum rubrum S1H | 0.58 | Rru_A0222 | | Glyceraldehyde-3-phosphate dehydrogenase, type I (NCBI) | 0.22 | Rru_A3539 | | GlnB (protein PII) uridylyltransferase, GlnD (NCBI) | — | — |
| Rhodopseudomonas palustris CGA009 | 0.57 | TX73_004865 | | type I glyceraldehyde-3-phosphate dehydrogenase | 0.23 | TX73_003060 | | [protein-PII] uridylyltransferase | — | — |
| Agrobacterium fabrum C58 | 0.56 | Atu3737 | | glyceraldehyde 3-phosphate dehydrogenase | 0.24 | Atu0346 | | uridylyltransferase/uridylyl-removing enzyme UTase | — | — |
| Rhizobium sp. OAE497 | 0.56 | ABIE40_RS15870 | | type I glyceraldehyde-3-phosphate dehydrogenase | 0.23 | ABIE40_RS01765 | | [protein-PII] uridylyltransferase | — | — |
| Azospirillum brasilense Sp245 | 0.56 | AZOBR_RS10375 | | glyceraldehyde-3-phosphate dehydrogenase | 0.24 | AZOBR_RS02110 | | protein-PII uridylyltransferase | low | > 97 |
| Azospirillum sp. SherDot2 | 0.54 | MPMX19_00689 | | Glyceraldehyde-3-phosphate dehydrogenase 1 | 0.24 | MPMX19_00912 | | Bifunctional uridylyltransferase/uridylyl-removing enzyme | low | > 112 |
| Dinoroseobacter shibae DFL-12 | 0.54 | Dshi_1742 | | glyceraldehyde-3-phosphate dehydrogenase, type I (RefSeq) | 0.21 | Dshi_2833 | | UTP-GlnB uridylyltransferase, GlnD (RefSeq) | — | — |
| Bosea sp. OAE506 | 0.52 | ABIE41_RS09420 | | type I glyceraldehyde-3-phosphate dehydrogenase | 0.23 | ABIE41_RS00205 | | [protein-PII] uridylyltransferase | — | — |
| Xanthobacter sp. DMC5 | 0.52 | GFF89 | | Glyceraldehyde-3-phosphate dehydrogenase 1 | 0.24 | GFF1795 | | Bifunctional uridylyltransferase/uridylyl-removing enzyme | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.52 | Ga0059261_0730 | | glyceraldehyde-3-phosphate dehydrogenase, type I | 0.24 | Ga0059261_2737 | | UTP--GlnB (protein PII) uridylyltransferase, GlnD | — | — |
| Phaeobacter inhibens DSM 17395 | 0.52 | PGA1_c27490 | | glyceraldehyde-3-phosphate dehydrogenase Gap | 0.21 | PGA1_c26750 | | uridylyltransferase GlnD | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.51 | A4249_RS10040 | | type I glyceraldehyde-3-phosphate dehydrogenase | 0.22 | A4249_RS13590 | | [protein-PII] uridylyltransferase | — | — |
| Rahnella sp. WP5 | 0.51 | EX31_RS06915 | | type I glyceraldehyde-3-phosphate dehydrogenase | 0.36 | EX31_RS13045 | | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | low | > 89 |
| Caulobacter crescentus NA1000 | 0.50 | CCNA_03358 | | glyceraldehyde 3-phosphate dehydrogenase | 0.21 | CCNA_00013 | | protein-PII uridylyltransferase | — | — |
| Pseudomonas stutzeri RCH2 | 0.50 | Psest_3784 | | glyceraldehyde-3-phosphate dehydrogenase, type I | 0.81 | Psest_2845 | | [Protein-PII] uridylyltransferase | low | > 67 |
| Caulobacter crescentus NA1000 Δfur | 0.50 | CCNA_03358 | | glyceraldehyde 3-phosphate dehydrogenase | 0.21 | CCNA_00013 | | protein-PII uridylyltransferase | — | — |
| Dechlorosoma suillum PS | 0.50 | Dsui_1560 | | glyceraldehyde-3-phosphate dehydrogenase, type I | 0.33 | Dsui_2696 | | (protein-PII) uridylyltransferase | — | — |
| Pseudomonas sp. S08-1 | 0.50 | OH686_04710 | | glyceraldehyde-3-phosphate dehydrogenase, type I | 0.85 | OH686_06495 | | protein-P-II uridylyltransferase | low | > 80 |
| Serratia liquefaciens MT49 | 0.49 | IAI46_16675 | | type I glyceraldehyde-3-phosphate dehydrogenase | 0.38 | IAI46_20270 | | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | low | > 86 |
| Mycobacterium tuberculosis H37Rv | 0.49 | Rv1436 | | Probable glyceraldehyde 3-phosphate dehydrogenase Gap (GAPDH) | 0.10 | Rv2918c | | Probable [protein-PII] uridylyltransferase GlnD (PII uridylyl-transferase) (uridylyl removing enzyme) (UTASE) | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.47 | CSW01_09975 | | type I glyceraldehyde-3-phosphate dehydrogenase | 0.38 | CSW01_11520 | | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | — | — |
| Ralstonia solanacearum GMI1000 | 0.46 | RS_RS13755 | | aldehyde dehydrogenase | 0.30 | RS_RS07035 | | bifunctional uridylyltransferase/uridylyl-removing protein | — | — |
| Ralstonia solanacearum UW163 | 0.46 | UW163_RS07760 | | type I glyceraldehyde-3-phosphate dehydrogenase | 0.30 | UW163_RS13695 | | [protein-PII] uridylyltransferase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.46 | RALBFv3_RS05865 | | type I glyceraldehyde-3-phosphate dehydrogenase | 0.30 | RALBFv3_RS00365 | | [protein-PII] uridylyltransferase | — | — |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.46 | DVU0565 | gap-1 | glyceraldehyde 3-phosphate dehydrogenase (TIGR) | 0.13 | DVU1233 | glnD | protein-P-II uridylyltransferase, putative (TIGR) | low | > 55 |
| Ralstonia solanacearum PSI07 | 0.46 | RPSI07_RS11435 | | type I glyceraldehyde-3-phosphate dehydrogenase | 0.31 | RPSI07_RS17110 | | [protein-PII] uridylyltransferase | — | — |
| Ralstonia sp. UNC404CL21Col | 0.45 | ABZR87_RS01435 | | type I glyceraldehyde-3-phosphate dehydrogenase | 0.31 | ABZR87_RS11815 | | [protein-PII] uridylyltransferase | — | — |
| Rhodanobacter denitrificans MT42 | 0.45 | LRK55_RS05540 | | type I glyceraldehyde-3-phosphate dehydrogenase | 0.33 | LRK55_RS02995 | | [protein-PII] uridylyltransferase | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.45 | LRK54_RS05785 | | type I glyceraldehyde-3-phosphate dehydrogenase | 0.33 | LRK54_RS03245 | | [protein-PII] uridylyltransferase | — | — |
| Desulfovibrio vulgaris Miyazaki F | 0.45 | DvMF_1440 | | glyceraldehyde-3-phosphate dehydrogenase, type I (RefSeq) | 0.12 | DvMF_0864 | | UTP-GlnB uridylyltransferase, GlnD (RefSeq) | low | > 51 |
| Variovorax sp. SCN45 | 0.45 | GFF7175 | | NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) | 0.30 | GFF1322 | | [Protein-PII] uridylyltransferase (EC 2.7.7.59) / [Protein-PII]-UMP uridylyl-removing enzyme | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.45 | RR42_RS17570 | | glyceraldehyde-3-phosphate dehydrogenase | 0.30 | RR42_RS11885 | | (protein-PII) uridylyltransferase | — | — |
| Acidovorax sp. GW101-3H11 | 0.45 | Ac3H11_648 | | NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) | 0.30 | Ac3H11_537 | | [Protein-PII] uridylyltransferase (EC 2.7.7.59) | — | — |
| Variovorax sp. OAS795 | 0.44 | ABID97_RS02440 | | type I glyceraldehyde-3-phosphate dehydrogenase | 0.30 | ABID97_RS15665 | | [protein-PII] uridylyltransferase | — | — |
| Rhodanobacter sp000427505 FW510-R12 | 0.44 | LRK53_RS17145 | | type I glyceraldehyde-3-phosphate dehydrogenase | 0.33 | LRK53_RS06715 | | [protein-PII] uridylyltransferase | low | > 60 |
| Rhodanobacter sp. FW510-T8 | 0.44 | OKGIIK_01060 | gap | type I glyceraldehyde-3-phosphate dehydrogenase | 0.32 | OKGIIK_10125 | glnD | [protein-PII] uridylyltransferase | low | > 52 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.44 | Xcc-8004.1236.1 | | NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) | 0.31 | Xcc-8004.3543.1 | | [Protein-PII] uridylyltransferase (EC 2.7.7.59) | — | — |
| Methylophilus sp. DMC18 | 0.43 | GFF1711 | | Glyceraldehyde-3-phosphate dehydrogenase A | 0.34 | GFF1056 | | Bifunctional uridylyltransferase/uridylyl-removing enzyme | low | > 43 |
| Magnetospirillum magneticum AMB-1 | 0.43 | AMB_RS02635 | | type I glyceraldehyde-3-phosphate dehydrogenase | 0.24 | AMB_RS22650 | | [protein-PII] uridylyltransferase | — | — |
| Acinetobacter radioresistens SK82 | 0.43 | MPMX26_01087 | | D-erythrose-4-phosphate dehydrogenase | 0.38 | MPMX26_01867 | | Bifunctional uridylyltransferase/uridylyl-removing enzyme | low | > 36 |
Not shown: 16 genomes with orthologs for Pf1N1B4_602 only; 26 genomes with orthologs for Pf1N1B4_3081 only