Conservation of cofitness between PP_0363 and PP_0366 in Pseudomonas putida KT2440

82 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_0363 8-amino-7-oxononanoate synthase 1.0 PP_0366 dethiobiotin synthetase 0.92 4
Pseudomonas syringae pv. syringae B728a 0.84 Psyr_4686 8-amino-7-oxononanoate synthase 0.72 Psyr_4683 dethiobiotin synthase 0.83 3
Pseudomonas syringae pv. syringae B728a ΔmexB 0.84 Psyr_4686 8-amino-7-oxononanoate synthase 0.72 Psyr_4683 dethiobiotin synthase 0.69 7
Pseudomonas fluorescens GW456-L13 0.84 PfGW456L13_1148 8-amino-7-oxononanoate synthase (EC 2.3.1.47) 0.79 PfGW456L13_1151 Dethiobiotin synthetase (EC 6.3.3.3) 0.98 2
Pseudomonas sp. RS175 0.84 PFR28_04102 8-amino-7-oxononanoate synthase 0.77 PFR28_04099 ATP-dependent dethiobiotin synthetase BioD 1 — —
Pseudomonas fluorescens FW300-N2E3 0.83 AO353_07520 8-amino-7-oxononanoate synthase 0.77 AO353_07505 dethiobiotin synthetase 0.97 3
Pseudomonas fluorescens FW300-N2E2 0.83 Pf6N2E2_4761 8-amino-7-oxononanoate synthase (EC 2.3.1.47) 0.77 Pf6N2E2_4764 Dethiobiotin synthetase (EC 6.3.3.3) 0.92 3
Pseudomonas fluorescens FW300-N1B4 0.83 Pf1N1B4_2488 8-amino-7-oxononanoate synthase (EC 2.3.1.47) 0.78 Pf1N1B4_2491 Dethiobiotin synthetase (EC 6.3.3.3) 0.91 3
Pseudomonas fluorescens SBW25 0.82 PFLU_RS27645 8-amino-7-oxononanoate synthase 0.77 PFLU_RS27630 dethiobiotin synthase 0.83 3
Pseudomonas fluorescens SBW25-INTG 0.82 PFLU_RS27645 8-amino-7-oxononanoate synthase 0.77 PFLU_RS27630 dethiobiotin synthase 0.90 3
Pseudomonas simiae WCS417 0.82 PS417_26000 8-amino-7-oxononanoate synthase 0.76 PS417_25985 dethiobiotin synthetase 0.63 4
Pseudomonas stutzeri RCH2 0.82 Psest_0412 8-amino-7-oxononanoate synthase 0.62 Psest_0415 dethiobiotin synthase 0.88 4
Pseudomonas fluorescens FW300-N2C3 0.81 AO356_14140 8-amino-7-oxononanoate synthase 0.77 AO356_14155 dethiobiotin synthetase 0.94 2
Pseudomonas sp. S08-1 0.81 OH686_10350 8-amino-7-oxononanoate synthase 0.72 OH686_10335 dethiobiotin synthase 0.97 4
Marinobacter adhaerens HP15 0.56 HP15_2485 8-amino-7-oxononanoate synthase 0.49 HP15_2482 dethiobiotin synthetase low > 73
Dechlorosoma suillum PS 0.49 Dsui_2881 8-amino-7-oxononanoate synthase 0.43 Dsui_2884 dethiobiotin synthase 0.90 3
Kangiella aquimarina DSM 16071 0.48 B158DRAFT_0865 8-amino-7-oxononanoate synthase 0.39 B158DRAFT_0869 dethiobiotin synthase — —
Dyella japonica UNC79MFTsu3.2 0.46 ABZR86_RS15835 8-amino-7-oxononanoate synthase 0.46 ABZR86_RS12700 dethiobiotin synthase low > 74
Rhodanobacter denitrificans MT42 0.46 LRK55_RS09895 8-amino-7-oxononanoate synthase 0.41 LRK55_RS06915 dethiobiotin synthase low > 63
Rhodanobacter denitrificans FW104-10B01 0.45 LRK54_RS10255 8-amino-7-oxononanoate synthase 0.41 LRK54_RS07180 dethiobiotin synthase low > 59
Rhodanobacter sp. FW510-T8 0.44 OKGIIK_13655 bioF 8-amino-7-oxononanoate synthase 0.42 OKGIIK_16455 bioD dethiobiotin synthase low > 52
Lysobacter sp. OAE881 0.42 ABIE51_RS01145 8-amino-7-oxononanoate synthase 0.42 ABIE51_RS17990 dethiobiotin synthase low > 62
Enterobacter sp. TBS_079 0.42 MPMX20_01404 8-amino-7-oxononanoate synthase 0.45 MPMX20_01406 ATP-dependent dethiobiotin synthetase BioD 1 0.29 10
Xanthomonas campestris pv. campestris strain 8004 0.41 Xcc-8004.504.1 8-amino-7-oxononanoate synthase (EC 2.3.1.47) 0.33 Xcc-8004.4530.1 Dethiobiotin synthetase (EC 6.3.3.3) 0.82 1
Enterobacter asburiae PDN3 0.40 EX28DRAFT_2215 8-amino-7-oxononanoate synthase 0.46 EX28DRAFT_2213 dethiobiotin synthase low > 76
Dickeya dianthicola 67-19 0.40 HGI48_RS08680 8-amino-7-oxononanoate synthase 0.47 HGI48_RS08690 ATP-dependent dethiobiotin synthetase BioD 0.75 50
Dickeya dianthicola ME23 0.40 DZA65_RS08970 8-amino-7-oxononanoate synthase 0.47 DZA65_RS08980 ATP-dependent dethiobiotin synthetase BioD 0.53 25
Dickeya dadantii 3937 0.40 DDA3937_RS08515 8-amino-7-oxononanoate synthase 0.45 DDA3937_RS08525 ATP-dependent dethiobiotin synthetase BioD low > 74
Herbaspirillum seropedicae SmR1 0.40 HSERO_RS12245 8-amino-7-oxononanoate synthase 0.37 HSERO_RS12255 dethiobiotin synthetase 0.37 2
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.38 GFF672 8-amino-7-oxononanoate synthase (EC 2.3.1.47) 0.42 GFF674 Dethiobiotin synthetase (EC 6.3.3.3) low > 78
Vibrio cholerae E7946 ATCC 55056 0.38 CSW01_05650 8-amino-7-oxononanoate synthase 0.45 CSW01_05660 dethiobiotin synthase low > 62
Pectobacterium carotovorum WPP14 0.38 HER17_RS13455 8-amino-7-oxononanoate synthase 0.44 HER17_RS13445 dethiobiotin synthase low > 75
Erwinia tracheiphila SCR3 0.38 LU632_RS09135 bioF 8-amino-7-oxononanoate synthase 0.43 LU632_RS09145 bioD dethiobiotin synthase — —
Rahnella sp. WP5 0.37 EX31_RS23700 8-amino-7-oxononanoate synthase 0.41 EX31_RS23710 ATP-dependent dethiobiotin synthetase BioD low > 89
Paraburkholderia graminis OAS925 0.37 ABIE53_000579 8-amino-7-oxononanoate synthase 0.34 ABIE53_000578 dethiobiotin synthetase 0.94 1
Paraburkholderia bryophila 376MFSha3.1 0.37 H281DRAFT_02095 8-amino-7-oxononanoate synthase 0.34 H281DRAFT_02096 dethiobiotin synthetase 0.77 2
Escherichia fergusonii Becca 0.37 EFB2_03329 8-amino-7-oxononanoate synthase 0.44 EFB2_03327 ATP-dependent dethiobiotin synthetase BioD 1 low > 86
Escherichia coli Nissle 1917 0.37 ECOLIN_RS04135 8-amino-7-oxononanoate synthase 0.44 ECOLIN_RS04145 dethiobiotin synthase — —
Escherichia coli ECRC98 0.37 JDDGAC_10030 bioF 8-amino-7-oxononanoate synthase 0.44 JDDGAC_10020 bioD dethiobiotin synthase — —
Escherichia coli ECRC101 0.37 OKFHMN_06395 bioF 8-amino-7-oxononanoate synthase 0.44 OKFHMN_06385 bioD dethiobiotin synthase — —
Escherichia coli ECRC101 0.37 MCAODC_25610 bioF 8-amino-7-oxononanoate synthase 0.44 MCAODC_25600 bioD dethiobiotin synthase — —
Escherichia coli ECRC102 0.37 NIAGMN_04440 bioF 8-amino-7-oxononanoate synthase 0.44 NIAGMN_04430 bioD dethiobiotin synthase — —
Escherichia coli ECRC62 0.37 BNILDI_21035 bioF 8-amino-7-oxononanoate synthase 0.43 BNILDI_21025 bioD dethiobiotin synthase — —
Escherichia coli ECRC99 0.37 KEDOAH_21515 bioF 8-amino-7-oxononanoate synthase 0.44 KEDOAH_21525 bioD dethiobiotin synthase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.36 OHPLBJKB_02937 8-amino-7-oxononanoate synthase 0.44 OHPLBJKB_02935 ATP-dependent dethiobiotin synthetase BioD 1 low > 73
Escherichia coli BW25113 0.36 b0776 bioF 8-amino-7-oxononanoate synthase (NCBI) 0.44 b0778 bioD dethiobiotin synthetase (NCBI) 0.45 4
Escherichia coli BL21 0.36 ECD_00743 8-amino-7-oxononanoate synthase 0.44 ECD_00745 dethiobiotin synthetase low > 60
Hydrogenophaga sp. GW460-11-11-14-LB1 0.36 GFF3995 8-amino-7-oxononanoate synthase (EC 2.3.1.47) 0.42 GFF3994 Dethiobiotin synthetase (EC 6.3.3.3) — —
Burkholderia phytofirmans PsJN 0.36 BPHYT_RS02160 8-amino-7-oxononanoate synthase 0.37 BPHYT_RS02155 dithiobiotin synthetase 0.53 2
Paraburkholderia sabiae LMG 24235 0.36 QEN71_RS01095 8-amino-7-oxononanoate synthase 0.32 QEN71_RS01090 dethiobiotin synthase — —
Escherichia coli ECOR27 0.36 NOLOHH_22765 bioF 8-amino-7-oxononanoate synthase 0.44 NOLOHH_22755 bioD dethiobiotin synthase low > 57
Escherichia coli ECOR38 0.36 HEPCGN_01645 bioF 8-amino-7-oxononanoate synthase 0.43 HEPCGN_01655 bioD dethiobiotin synthase low > 85
Serratia liquefaciens MT49 0.36 IAI46_06530 8-amino-7-oxononanoate synthase 0.45 IAI46_06540 ATP-dependent dethiobiotin synthetase BioD low > 86
Alteromonas macleodii MIT1002 0.36 MIT1002_01380 8-amino-7-oxononanoate synthase 0.40 MIT1002_01382 ATP-dependent dethiobiotin synthetase BioD 1 0.98 3
Acidovorax sp. GW101-3H11 0.36 Ac3H11_3830 8-amino-7-oxononanoate synthase (EC 2.3.1.47) 0.35 Ac3H11_3829 Dethiobiotin synthetase (EC 6.3.3.3) low > 79
Ralstonia solanacearum IBSBF1503 0.35 RALBFv3_RS00820 8-amino-7-oxononanoate synthase 0.35 RALBFv3_RS00825 dethiobiotin synthase — —
Ralstonia solanacearum UW163 0.35 UW163_RS14155 8-amino-7-oxononanoate synthase 0.35 UW163_RS14160 dethiobiotin synthase — —
Shewanella oneidensis MR-1 0.35 SO2739 bioF 8-amino-7-oxononanoate synthase (NCBI ptt file) 0.51 SO2737 bioD dethiobiotin synthase (NCBI ptt file) — —
Ralstonia solanacearum GMI1000 0.35 RS_RS07435 8-amino-7-oxononanoate synthase 0.32 RS_RS07440 ATP-dependent dethiobiotin synthetase BioD — —
Cupriavidus basilensis FW507-4G11 0.35 RR42_RS00930 8-amino-7-oxononanoate synthase 0.28 RR42_RS00935 dethiobiotin synthetase — —
Variovorax sp. OAS795 0.35 ABID97_RS16260 8-amino-7-oxononanoate synthase 0.37 ABID97_RS16255 dethiobiotin synthase — —
Klebsiella michiganensis M5al 0.35 BWI76_RS08765 8-amino-7-oxononanoate synthase 0.44 BWI76_RS08775 dethiobiotin synthase 0.19 59
Ralstonia solanacearum PSI07 0.35 RPSI07_RS16700 8-amino-7-oxononanoate synthase 0.33 RPSI07_RS16695 dethiobiotin synthase low > 81
Ralstonia sp. UNC404CL21Col 0.35 ABZR87_RS12340 8-amino-7-oxononanoate synthase 0.33 ABZR87_RS12345 dethiobiotin synthase low > 80
Shewanella loihica PV-4 0.35 Shew_1720 8-amino-7-oxononanoate synthase (RefSeq) 0.53 Shew_1722 dethiobiotin synthase (RefSeq) — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.34 CA264_07040 8-amino-7-oxononanoate synthase 0.12 CA264_02415 dethiobiotin synthase low > 74
Shewanella sp. ANA-3 0.34 Shewana3_2518 aminotransferase, class I and II (RefSeq) 0.51 Shewana3_2516 bioD dithiobiotin synthetase (RefSeq) — —
Pedobacter sp. GW460-11-11-14-LB5 0.34 CA265_RS13580 8-amino-7-oxononanoate synthase 0.14 CA265_RS09760 dethiobiotin synthase low > 88
Pantoea sp. MT58 0.33 IAI47_13525 8-amino-7-oxononanoate synthase 0.47 IAI47_13515 ATP-dependent dethiobiotin synthetase BioD low > 76
Variovorax sp. SCN45 0.32 GFF144 8-amino-7-oxononanoate synthase (EC 2.3.1.47) 0.36 GFF143 Dethiobiotin synthase BioD (EC 6.3.3.3) low > 127
Rhizobium sp. OAE497 0.32 ABIE40_RS12730 glycine C-acetyltransferase 0.15 ABIE40_RS21065 dethiobiotin synthase low > 107
Shewanella amazonensis SB2B 0.32 Sama_0098 2-amino-3-ketobutyrate coenzyme A ligase (RefSeq) 0.42 Sama_1441 bioD dithiobiotin synthetase (RefSeq) — —
Parabacteroides merdae CL09T00C40 0.32 HMPREF1078_RS16170 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.18 HMPREF1078_RS15275 dethiobiotin synthase — —
Methanococcus maripaludis S2 0.31 MMP_RS08100 8-amino-7-oxononanoate synthase 0.13 MMP_RS08095 dethiobiotin synthase 0.97 3
Castellaniella sp019104865 MT123 0.31 ABCV34_RS15295 8-amino-7-oxononanoate synthase 0.14 ABCV34_RS15285 dethiobiotin synthase low > 48
Bacteroides stercoris CC31F 0.30 HMPREF1181_RS14215 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.15 HMPREF1181_RS15515 ATP-dependent dethiobiotin synthetase BioD — —
Phaeobacter inhibens DSM 17395 0.30 PGA1_c34330 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) (from data) 0.13 PGA1_c09140 dethiobiotin synthetase BioD low > 62
Synechococcus elongatus PCC 7942 0.30 Synpcc7942_0027 bioF 8-amino-7-oxononanoate synthase 0.15 Synpcc7942_0030 bioD dethiobiotin synthase — —
Methanococcus maripaludis JJ 0.30 MMJJ_RS06265 8-amino-7-oxononanoate synthase 0.13 MMJJ_RS06270 dethiobiotin synthase 0.94 5
Bacteroides ovatus ATCC 8483 0.29 BACOVA_02588 putative 8-amino-7-oxononanoate synthase 0.14 BACOVA_00874 dethiobiotin synthase — —
Bacteroides thetaiotaomicron VPI-5482 0.29 BT1371 2-amino-3-ketobutyrate coenzyme A ligase (NCBI ptt file) 0.13 BT1446 dethiobiotin synthetase (NCBI ptt file) low > 81
Agrobacterium fabrum C58 0.25 Atu2613 5-aminolevulinate synthase 0.14 Atu3999 dithiobiotin synthetase — —
Desulfovibrio vulgaris Miyazaki F 0.18 DvMF_1008 aminotransferase class I and II (RefSeq) 0.17 DvMF_1009 dethiobiotin synthase (RefSeq) low > 51

Not shown: 19 genomes with orthologs for PP_0363 only; 0 genomes with orthologs for PP_0366 only