Conservation of cofitness between PP_3821 and PP_0123 in Pseudomonas putida KT2440

85 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_3821 UTP-glucose-1-phosphate uridylyltransferase 1.0 PP_0123 DNA polymerase I, 5 0.35 4
Pseudomonas sp. RS175 0.95 PFR28_02484 UTP--glucose-1-phosphate uridylyltransferase 0.79 PFR28_04624 DNA polymerase I low > 88
Pseudomonas fluorescens FW300-N2C3 0.94 AO356_22795 UTP--glucose-1-phosphate uridylyltransferase 0.80 AO356_11465 DNA polymerase I low > 104
Pseudomonas fluorescens FW300-N2E2 0.94 Pf6N2E2_445 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) 0.80 Pf6N2E2_4162 DNA polymerase I (EC 2.7.7.7) low > 103
Pseudomonas fluorescens FW300-N1B4 0.94 Pf1N1B4_5015 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) 0.79 Pf1N1B4_1875 DNA polymerase I (EC 2.7.7.7) — —
Pseudomonas fluorescens GW456-L13 0.94 PfGW456L13_2923 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) 0.76 PfGW456L13_594 DNA polymerase I (EC 2.7.7.7) low > 87
Pseudomonas fluorescens FW300-N2E3 0.92 AO353_26975 UTP--glucose-1-phosphate uridylyltransferase 0.80 AO353_10930 DNA polymerase I — —
Pseudomonas sp. S08-1 0.91 OH686_01620 UTP--glucose-1-phosphate uridylyltransferase 0.77 OH686_12215 DNA polymerase I low > 80
Pseudomonas simiae WCS417 0.90 PS417_14065 UTP--glucose-1-phosphate uridylyltransferase 0.79 PS417_00405 DNA polymerase I low > 88
Pseudomonas fluorescens SBW25-INTG 0.90 PFLU_RS14550 UTP--glucose-1-phosphate uridylyltransferase GalU 0.77 PFLU_RS00395 DNA polymerase I low > 109
Pseudomonas fluorescens SBW25 0.90 PFLU_RS14550 UTP--glucose-1-phosphate uridylyltransferase GalU 0.77 PFLU_RS00395 DNA polymerase I low > 109
Pseudomonas syringae pv. syringae B728a 0.88 Psyr_2980 UDP-glucose pyrophosphorylase 0.79 Psyr_0270 DNA polymerase I low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.88 Psyr_2980 UDP-glucose pyrophosphorylase 0.79 Psyr_0270 DNA polymerase I low > 86
Pseudomonas stutzeri RCH2 0.88 Psest_2232 UTP-glucose-1-phosphate uridylyltransferase 0.77 Psest_4219 DNA polymerase I low > 67
Vibrio cholerae E7946 ATCC 55056 0.77 CSW01_02085 UTP--glucose-1-phosphate uridylyltransferase 0.61 CSW01_00560 DNA polymerase I low > 62
Marinobacter adhaerens HP15 0.75 HP15_1935 UTP-glucose-1-phosphate uridylyltransferase 0.56 HP15_293 DNA polymerase I — —
Cupriavidus basilensis FW507-4G11 0.51 RR42_RS15100 UTP--glucose-1-phosphate uridylyltransferase 0.52 RR42_RS15050 DNA polymerase I — —
Ralstonia solanacearum GMI1000 0.51 RS_RS17225 UTP--glucose-1-phosphate uridylyltransferase 0.51 RS_RS11195 DNA polymerase I low > 80
Ralstonia sp. UNC404CL21Col 0.51 ABZR87_RS16290 UTP--glucose-1-phosphate uridylyltransferase GalU 0.52 ABZR87_RS15680 DNA polymerase I low > 80
Variovorax sp. SCN45 0.50 GFF6022 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) 0.49 GFF4006 DNA polymerase I (EC 2.7.7.7) low > 127
Ralstonia solanacearum PSI07 0.50 RPSI07_RS00030 UTP--glucose-1-phosphate uridylyltransferase 0.51 RPSI07_RS13480 DNA polymerase I low > 81
Ralstonia solanacearum UW163 0.50 UW163_RS16490 UTP--glucose-1-phosphate uridylyltransferase 0.51 UW163_RS09920 DNA polymerase I — —
Ralstonia solanacearum IBSBF1503 0.50 RALBFv3_RS23240 UTP--glucose-1-phosphate uridylyltransferase 0.51 RALBFv3_RS03750 DNA polymerase I low > 76
Paraburkholderia sabiae LMG 24235 0.50 QEN71_RS05100 UTP--glucose-1-phosphate uridylyltransferase GalU 0.52 QEN71_RS17885 DNA polymerase I — —
Paraburkholderia bryophila 376MFSha3.1 0.49 H281DRAFT_04467 UDP-glucose pyrophosphorylase 0.50 H281DRAFT_06022 DNA polymerase I low > 103
Variovorax sp. OAS795 0.49 ABID97_RS07895 UTP--glucose-1-phosphate uridylyltransferase GalU 0.48 ABID97_RS09180 DNA polymerase I — —
Paraburkholderia graminis OAS925 0.49 ABIE53_002940 UTP--glucose-1-phosphate uridylyltransferase 0.51 ABIE53_004852 DNA polymerase-1 low > 113
Burkholderia phytofirmans PsJN 0.49 BPHYT_RS13860 UTP--glucose-1-phosphate uridylyltransferase 0.51 BPHYT_RS33610 DNA polymerase I — —
Acidovorax sp. GW101-3H11 0.48 Ac3H11_3541 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) 0.48 Ac3H11_1648 DNA polymerase I (EC 2.7.7.7) — —
Castellaniella sp019104865 MT123 0.47 ABCV34_RS13315 UTP--glucose-1-phosphate uridylyltransferase GalU 0.47 ABCV34_RS02195 DNA polymerase I — —
Dechlorosoma suillum PS 0.46 Dsui_2700 UTP-glucose-1-phosphate uridylyltransferase 0.52 Dsui_0459 DNA polymerase I — —
Lysobacter sp. OAE881 0.45 ABIE51_RS09375 UTP--glucose-1-phosphate uridylyltransferase GalU 0.52 ABIE51_RS02010 DNA polymerase I low > 62
Rhodanobacter denitrificans FW104-10B01 0.45 LRK54_RS18065 UTP--glucose-1-phosphate uridylyltransferase GalU 0.56 LRK54_RS06840 DNA polymerase I — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.44 GFF3326 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) 0.45 GFF5584 DNA polymerase I (EC 2.7.7.7) low > 90
Rhodanobacter sp. FW510-T8 0.44 OKGIIK_07235 galU UTP--glucose-1-phosphate uridylyltransferase GalU 0.56 OKGIIK_16785 polA DNA polymerase I — —
Rhodanobacter denitrificans MT42 0.44 LRK55_RS17920 UTP--glucose-1-phosphate uridylyltransferase GalU 0.56 LRK55_RS06585 DNA polymerase I — —
Xanthomonas campestris pv. campestris strain 8004 0.44 Xcc-8004.2387.1 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) 0.52 Xcc-8004.5105.1 DNA polymerase I (EC 2.7.7.7) — —
Sphingomonas koreensis DSMZ 15582 0.43 Ga0059261_3133 UTP--glucose-1-phosphate uridylyltransferase 0.35 Ga0059261_2244 DNA polymerase I (EC 2.7.7.7) — —
Agrobacterium fabrum C58 0.43 Atu3778 UTP-glucose-1-phosphate uridylyltransferase 0.41 Atu0110 DNA polymerase I — —
Rhizobium sp. OAE497 0.43 ABIE40_RS16250 UTP--glucose-1-phosphate uridylyltransferase GalU 0.31 ABIE40_RS00490 DNA polymerase I — —
Dyella japonica UNC79MFTsu3.2 0.43 ABZR86_RS05535 UTP--glucose-1-phosphate uridylyltransferase GalU 0.55 ABZR86_RS17015 DNA polymerase I — —
Magnetospirillum magneticum AMB-1 0.42 AMB_RS02985 UTP--glucose-1-phosphate uridylyltransferase 0.39 AMB_RS21305 DNA polymerase I — —
Fusobacterium nucleatum SB010 0.42 HUW76_03920 UTP--glucose-1-phosphate uridylyltransferase GalU 0.26 HUW76_04385 DNA polymerase I — —
Dinoroseobacter shibae DFL-12 0.41 Dshi_3577 UTP-glucose-1-phosphate uridylyltransferase (RefSeq) 0.40 Dshi_2909 DNA polymerase I (RefSeq) — —
Phaeobacter inhibens DSM 17395 0.41 PGA1_c34480 UTP--glucose-1-phosphate uridylyltransferase CelA 0.39 PGA1_c31780 DNA polymerase I low > 62
Desulfovibrio vulgaris Miyazaki F 0.41 DvMF_0060 UTP-glucose-1-phosphate uridylyltransferase (RefSeq) 0.25 DvMF_1713 DNA polymerase I (RefSeq) — —
Rhodopseudomonas palustris CGA009 0.41 TX73_004570 UTP--glucose-1-phosphate uridylyltransferase GalU 0.36 TX73_024545 DNA polymerase I — —
Shewanella amazonensis SB2B 0.40 Sama_2223 UTP--glucose-1-phosphate uridylyltransferase (RefSeq) 0.61 Sama_0093 DNA-directed DNA polymerase (RefSeq) low > 62
Azospirillum sp. SherDot2 0.40 MPMX19_05340 UTP--glucose-1-phosphate uridylyltransferase 0.38 MPMX19_04869 DNA polymerase I — —
Rhodospirillum rubrum S1H 0.40 Rru_A2117 UTP--glucose-1-phosphate uridylyltransferase (NCBI) 0.36 Rru_A3514 DNA polymerase A (NCBI) — —
Azospirillum brasilense Sp245 0.40 AZOBR_RS31075 UTP--glucose-1-phosphate uridylyltransferase 0.39 AZOBR_RS30685 DNA polymerase — —
Bosea sp. OAE506 0.39 ABIE41_RS08590 UTP--glucose-1-phosphate uridylyltransferase 0.31 ABIE41_RS03570 DNA polymerase I — —
Alteromonas macleodii MIT1002 0.39 MIT1002_00981 UTP--glucose-1-phosphate uridylyltransferase 0.62 MIT1002_00014 DNA polymerase I — —
Shewanella sp. ANA-3 0.38 Shewana3_2782 UDP-glucose pyrophosphorylase (RefSeq) 0.61 Shewana3_4109 DNA polymerase I (RefSeq) — —
Pantoea sp. MT58 0.38 IAI47_09030 UTP--glucose-1-phosphate uridylyltransferase GalU 0.60 IAI47_00430 DNA polymerase I — —
Serratia liquefaciens MT49 0.38 IAI46_08000 UTP--glucose-1-phosphate uridylyltransferase GalU 0.60 IAI46_24985 DNA polymerase I low > 86
Shewanella loihica PV-4 0.38 Shew_1418 UTP-glucose-1-phosphate uridylyltransferase GalU (RefSeq) 0.60 Shew_3714 DNA polymerase I (RefSeq) low > 60
Pectobacterium carotovorum WPP14 0.37 HER17_RS11045 UTP--glucose-1-phosphate uridylyltransferase GalU 0.61 HER17_RS21470 DNA polymerase I — —
Shewanella oneidensis MR-1 0.37 SO1665 galU UTP-glucose-1-phosphate uridylyltransferase (NCBI ptt file) 0.60 SO4669 polA DNA polymerase I (NCBI ptt file) — —
Dickeya dadantii 3937 0.37 DDA3937_RS10345 UTP--glucose-1-phosphate uridylyltransferase GalU 0.59 DDA3937_RS00105 DNA polymerase I — —
Dickeya dianthicola 67-19 0.37 HGI48_RS10355 UTP--glucose-1-phosphate uridylyltransferase GalU 0.59 HGI48_RS21260 DNA polymerase I — —
Dickeya dianthicola ME23 0.37 DZA65_RS10830 UTP--glucose-1-phosphate uridylyltransferase GalU 0.59 DZA65_RS22235 DNA polymerase I — —
Rahnella sp. WP5 0.37 EX31_RS11525 UTP--glucose-1-phosphate uridylyltransferase GalU 0.61 EX31_RS15905 DNA polymerase I low > 89
Brevundimonas sp. GW460-12-10-14-LB2 0.37 A4249_RS14885 UTP--glucose-1-phosphate uridylyltransferase GalU 0.39 A4249_RS13840 DNA polymerase I — —
Escherichia coli ECRC98 0.36 JDDGAC_05985 galU UTP--glucose-1-phosphate uridylyltransferase GalU 0.61 JDDGAC_17775 polA DNA polymerase I — —
Escherichia coli Nissle 1917 0.36 ECOLIN_RS07480 UTP--glucose-1-phosphate uridylyltransferase GalU 0.61 ECOLIN_RS22270 DNA polymerase I — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.36 OHPLBJKB_02449 UTP--glucose-1-phosphate uridylyltransferase 0.61 OHPLBJKB_04189 DNA polymerase I — —
Escherichia coli ECOR38 0.36 HEPCGN_25050 galU UTP--glucose-1-phosphate uridylyltransferase GalU 0.61 HEPCGN_12785 polA DNA polymerase I — —
Escherichia coli ECRC102 0.36 NIAGMN_27645 galU UTP--glucose-1-phosphate uridylyltransferase GalU 0.61 NIAGMN_11905 polA DNA polymerase I — —
Escherichia coli BW25113 0.36 b1236 galU glucose-1-phosphate uridylyltransferase (NCBI) 0.61 b3863 polA DNA polymerase I (NCBI) low > 76
Escherichia coli ECRC62 0.36 BNILDI_18615 galU UTP--glucose-1-phosphate uridylyltransferase GalU 0.61 BNILDI_05250 polA DNA polymerase I — —
Escherichia coli ECOR27 0.36 NOLOHH_20460 galU UTP--glucose-1-phosphate uridylyltransferase GalU 0.61 NOLOHH_06280 polA DNA polymerase I — —
Escherichia fergusonii Becca 0.36 EFB2_02690 UTP--glucose-1-phosphate uridylyltransferase 0.60 EFB2_04753 DNA polymerase I — —
Escherichia coli ECRC99 0.36 KEDOAH_25585 galU UTP--glucose-1-phosphate uridylyltransferase GalU 0.61 KEDOAH_14000 polA DNA polymerase I — —
Escherichia coli ECRC101 0.36 OKFHMN_28590 galU UTP--glucose-1-phosphate uridylyltransferase GalU 0.61 OKFHMN_14150 polA DNA polymerase I — —
Escherichia coli BL21 0.36 ECD_01212 glucose-1-phosphate uridylyltransferase 0.61 ECD_03749 5 — —
Escherichia coli ECRC101 0.36 MCAODC_21670 galU UTP--glucose-1-phosphate uridylyltransferase GalU 0.61 MCAODC_04650 polA DNA polymerase I — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.36 GFF2752 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) 0.60 GFF2216 DNA polymerase I (EC 2.7.7.7) — —
Acinetobacter radioresistens SK82 0.36 MPMX26_00063 UTP--glucose-1-phosphate uridylyltransferase 0.48 MPMX26_00574 DNA polymerase I low > 36
Enterobacter asburiae PDN3 0.36 EX28DRAFT_0862 UTP--glucose-1-phosphate uridylyltransferase 0.60 EX28DRAFT_4343 DNA polymerase I (EC 2.7.7.7) — —
Enterobacter sp. TBS_079 0.36 MPMX20_02592 UTP--glucose-1-phosphate uridylyltransferase 0.60 MPMX20_04601 DNA polymerase I — —
Caulobacter crescentus NA1000 Δfur 0.35 CCNA_03752 UTP-glucose-1-phosphate uridylyltransferase 0.40 CCNA_03577 DNA polymerase I — —
Caulobacter crescentus NA1000 0.35 CCNA_03752 UTP-glucose-1-phosphate uridylyltransferase 0.40 CCNA_03577 DNA polymerase I — —
Klebsiella michiganensis M5al 0.35 BWI76_RS17270 UTP--glucose-1-phosphate uridylyltransferase 0.59 BWI76_RS00355 DNA polymerase I — —
Erwinia tracheiphila SCR3 0.34 LU632_RS12920 galU UTP--glucose-1-phosphate uridylyltransferase GalU 0.61 LU632_RS23870 polA DNA polymerase I — —
Mycobacterium tuberculosis H37Rv 0.25 Rv0993 UTP--glucose-1-phosphate uridylyltransferase GalU (UDP-glucose pyrophosphorylase) (UDPGP) (alpha-D-glucosyl-1-phosphate uridylyltransferase) (uridine diphosphoglucose pyrophosphorylase) 0.26 Rv1629 Probable DNA polymerase I PolA — —

Not shown: 4 genomes with orthologs for PP_3821 only; 12 genomes with orthologs for PP_0123 only