| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Azospirillum sp. SherDot2 | 1.0 | MPMX19_00577 | | Ribosomal RNA small subunit methyltransferase E | 1.0 | MPMX19_02462 | | Hydroperoxy fatty acid reductase gpx1 | 0.50 | 6 |
| Azospirillum brasilense Sp245 | 0.82 | AZOBR_RS11890 | | 16S rRNA methyltransferase | 0.53 | AZOBR_RS15945 | | glutathione peroxidase | low | > 97 |
| Bosea sp. OAE506 | 0.41 | ABIE41_RS23100 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.41 | ABIE41_RS12320 | | glutathione peroxidase | low | > 77 |
| Sphingomonas koreensis DSMZ 15582 | 0.41 | Ga0059261_0807 | | RNA methyltransferase, RsmE family | 0.42 | Ga0059261_2794 | | Glutathione peroxidase | low | > 68 |
| Rhodopseudomonas palustris CGA009 | 0.40 | TX73_005910 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.46 | TX73_018800 | | glutathione peroxidase | low | > 86 |
| Dinoroseobacter shibae DFL-12 | 0.39 | Dshi_3099 | | protein of unknown function DUF558 (RefSeq) | 0.40 | Dshi_2055 | | glutathione peroxidase (RefSeq) | low | > 64 |
| Caulobacter crescentus NA1000 Δfur | 0.39 | CCNA_03528 | | RNA methyltransferase | 0.45 | CCNA_01804 | | glutathione peroxidase | low | > 67 |
| Caulobacter crescentus NA1000 | 0.39 | CCNA_03528 | | RNA methyltransferase | 0.45 | CCNA_01804 | | glutathione peroxidase | low | > 66 |
| Rhodospirillum rubrum S1H | 0.38 | Rru_A0571 | | hypothetical protein (NCBI) | 0.60 | Rru_A1863 | | Glutathione peroxidase (NCBI) | low | > 58 |
| Xanthobacter sp. DMC5 | 0.36 | GFF1000 | | Ribosomal RNA small subunit methyltransferase E | 0.40 | GFF246 | | Thioredoxin/glutathione peroxidase BtuE | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.36 | A4249_RS00350 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.40 | A4249_RS04945 | | glutathione peroxidase | — | — |
| Rhizobium sp. OAE497 | 0.35 | ABIE40_RS03520 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.36 | ABIE40_RS16860 | | glutathione peroxidase | low | > 107 |
| Pseudomonas sp. RS175 | 0.22 | PFR28_04209 | | Ribosomal RNA small subunit methyltransferase E | 0.45 | PFR28_00986 | | Hydroperoxy fatty acid reductase gpx1 | low | > 88 |
| Pseudomonas fluorescens FW300-N2E2 | 0.22 | Pf6N2E2_4630 | | Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) | 0.44 | Pf6N2E2_2444 | | Glutathione peroxidase family protein | low | > 103 |
| Pseudomonas sp. DMC3 | 0.22 | GFF180 | | Ribosomal RNA small subunit methyltransferase E | 0.45 | GFF1853 | | Thioredoxin/glutathione peroxidase BtuE | low | > 89 |
| Pseudomonas fluorescens FW300-N1B4 | 0.22 | Pf1N1B4_2376 | | Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) | 0.45 | Pf1N1B4_259 | | Glutathione peroxidase family protein | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.22 | AO356_13565 | | 16S rRNA methyltransferase | 0.44 | AO356_03080 | | glutathione peroxidase | low | > 104 |
| Pseudomonas fluorescens GW456-L13 | 0.22 | PfGW456L13_1043 | | Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) | 0.44 | PfGW456L13_4987 | | Glutathione peroxidase family protein | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.22 | AO353_08050 | | 16S rRNA methyltransferase | 0.45 | AO353_05050 | | glutathione peroxidase | low | > 101 |
| Pseudomonas simiae WCS417 | 0.22 | PS417_26545 | | 16S rRNA methyltransferase | 0.45 | PS417_23535 | | glutathione peroxidase | low | > 88 |
| Marinobacter adhaerens HP15 | 0.22 | HP15_2926 | | ribosomal RNA small subunit methyltransferase E | 0.44 | HP15_2094 | | glutathione peroxidase | low | > 73 |
| Pseudomonas aeruginosa PA14 | 0.21 | IKLFDK_23325 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.48 | IKLFDK_03690 | | glutathione peroxidase | low | > 101 |
| Pseudomonas stutzeri RCH2 | 0.21 | Psest_0305 | | RNA methyltransferase, RsmE family | 0.42 | Psest_3211 | | Glutathione peroxidase | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.21 | PFLU_RS28200 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.44 | PFLU_RS08525 | | glutathione peroxidase | low | > 109 |
| Pseudomonas putida KT2440 | 0.21 | PP_4985 | | 16S rRNA m3U1498 methyltransferase | 0.45 | PP_0777 | | Glutathione peroxidase | low | > 96 |
| Pseudomonas fluorescens SBW25 | 0.21 | PFLU_RS28200 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.44 | PFLU_RS08525 | | glutathione peroxidase | low | > 109 |
| Pseudomonas sp. BP01 | 0.20 | JOY50_RS09765 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.42 | JOY50_RS19370 | | glutathione peroxidase | low | > 84 |
| Pseudomonas sp. SVBP6 | 0.20 | COO64_RS13645 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.44 | COO64_RS03485 | | glutathione peroxidase | low | > 93 |
| Pseudomonas syringae pv. syringae B728a | 0.20 | Psyr_0453 | | 16S rRNA m(3)U-1498 methyltransferase | 0.45 | Psyr_3613 | | Glutathione peroxidase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.20 | Psyr_0453 | | 16S rRNA m(3)U-1498 methyltransferase | 0.45 | Psyr_3613 | | Glutathione peroxidase | low | > 86 |
| Pseudomonas sp. S08-1 | 0.19 | OH686_10855 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.46 | OH686_06250 | | Glutathione peroxidase or Thioredoxin peroxidase | low | > 80 |
| Dyella japonica UNC79MFTsu3.2 | 0.19 | ABZR86_RS10230 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.45 | ABZR86_RS00480 | | glutathione peroxidase | low | > 74 |
| Acinetobacter radioresistens SK82 | 0.19 | MPMX26_01001 | | Ribosomal RNA small subunit methyltransferase E | 0.41 | MPMX26_01869 | | Glutathione peroxidase BsaA | low | > 36 |
| Rhodanobacter sp000427505 FW510-R12 | 0.19 | LRK53_RS05765 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.45 | LRK53_RS13855 | | glutathione peroxidase | low | > 60 |
| Erwinia tracheiphila SCR3 | 0.19 | LU632_RS05485 | rsmE | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.35 | LU632_RS10960 | | glutathione peroxidase | low | > 74 |
| Herbaspirillum seropedicae SmR1 | 0.19 | HSERO_RS07110 | | 16S rRNA methyltransferase | 0.43 | HSERO_RS19005 | | glutathione peroxidase | low | > 78 |
| Synechococcus elongatus PCC 7942 | 0.18 | Synpcc7942_0806 | | hypothetical protein | 0.39 | Synpcc7942_1214 | gpx1 | Glutathione peroxidase | low | > 38 |
| Pantoea sp. MT58 | 0.18 | IAI47_03620 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.42 | IAI47_20875 | | glutathione peroxidase | low | > 76 |
| Rhodanobacter denitrificans FW104-10B01 | 0.18 | LRK54_RS04160 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.46 | LRK54_RS14740 | | glutathione peroxidase | low | > 59 |
| Rhodanobacter sp. FW510-T8 | 0.18 | OKGIIK_11035 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.46 | OKGIIK_03565 | btuE | glutathione peroxidase | low | > 52 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.18 | H281DRAFT_06311 | | 16S rRNA (uracil1498-N3)-methyltransferase | 0.46 | H281DRAFT_00594 | | glutathione peroxidase | low | > 103 |
| Paraburkholderia sabiae LMG 24235 | 0.18 | QEN71_RS27020 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.45 | QEN71_RS06340 | | glutathione peroxidase | low | > 153 |
| Rhodanobacter denitrificans MT42 | 0.18 | LRK55_RS03930 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.46 | LRK55_RS14455 | | glutathione peroxidase | low | > 63 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.17 | GFF2462 | | Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) | 0.48 | GFF1918 | | Glutathione peroxidase family protein | low | > 90 |
| Escherichia coli BL21 | 0.17 | ECD_02776 | | 16S rRNA m(3)U1498 methyltransferase, SAM-dependent | 0.35 | ECD_01679 | | glutathione peroxidase | low | > 61 |
| Escherichia coli ECOR38 | 0.17 | HEPCGN_18585 | | Ribosomal RNA small subunit methyltransferase E | 0.34 | HEPCGN_05470 | btuE | bifunctional thioredoxin/glutathione peroxidase | low | > 87 |
| Escherichia coli ECRC100 | 0.17 | OKFHMN_19280 | rsmE | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.34 | OKFHMN_27105 | btuE | bifunctional thioredoxin/glutathione peroxidase | low | > 80 |
| Escherichia coli Nissle 1917 | 0.17 | ECOLIN_RS16390 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.35 | ECOLIN_RS09555 | | bifunctional thioredoxin/glutathione peroxidase | — | — |
| Escherichia coli BW25113 | 0.17 | b2946 | yggJ | orf, hypothetical protein (VIMSS) | 0.35 | b1710 | btuE | predicted glutathione peroxidase (NCBI) | low | > 76 |
| Escherichia coli ECRC101 | 0.17 | MCAODC_09800 | rsmE | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.34 | MCAODC_18305 | btuE | bifunctional thioredoxin/glutathione peroxidase | — | — |
| Escherichia coli ECOR27 | 0.17 | NOLOHH_11150 | rsmE | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.35 | NOLOHH_17625 | btuE | bifunctional thioredoxin/glutathione peroxidase | low | > 75 |
| Escherichia fergusonii Becca | 0.17 | EFB2_00956 | | Ribosomal RNA small subunit methyltransferase E | 0.35 | EFB2_02281 | | Thioredoxin/glutathione peroxidase BtuE | low | > 86 |
| Escherichia coli ECRC99 | 0.17 | KEDOAH_08860 | rsmE | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.34 | KEDOAH_01005 | btuE | bifunctional thioredoxin/glutathione peroxidase | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.17 | OHPLBJKB_00772 | | Ribosomal RNA small subunit methyltransferase E | 0.35 | OHPLBJKB_02023 | | Thioredoxin/glutathione peroxidase BtuE | low | > 73 |
| Escherichia coli ECRC98 | 0.17 | JDDGAC_22910 | rsmE | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.34 | JDDGAC_01680 | btuE | bifunctional thioredoxin/glutathione peroxidase | low | > 86 |
| Escherichia coli ECRC102 | 0.17 | NIAGMN_17045 | rsmE | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.34 | NIAGMN_00960 | btuE | bifunctional thioredoxin/glutathione peroxidase | — | — |
| Methylophilus sp. DMC18 | 0.17 | GFF2490 | | Ribosomal RNA small subunit methyltransferase E | 0.46 | GFF1327 | | Hydroperoxy fatty acid reductase gpx1 | low | > 43 |
| Paraburkholderia graminis OAS925 | 0.17 | ABIE53_003540 | | 16S rRNA (uracil1498-N3)-methyltransferase | 0.46 | ABIE53_002522 | | glutathione peroxidase | low | > 113 |
| Kangiella aquimarina DSM 16071 | 0.17 | B158DRAFT_0180 | | RNA methyltransferase, RsmE family | 0.41 | B158DRAFT_2194 | | Glutathione peroxidase | low | > 40 |
| Erwinia amylovora T8 | 0.17 | OLJFJH_08575 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.31 | OLJFJH_14665 | | glutathione peroxidase | low | > 58 |
| Alteromonas macleodii MIT1002 | 0.17 | MIT1002_03054 | | Ribosomal RNA small subunit methyltransferase E | 0.39 | MIT1002_01975 | | hypothetical protein | low | > 70 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.17 | Xcc-8004.1558.1 | | Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) | 0.49 | Xcc-8004.3509.1 | | Glutathione peroxidase family protein | — | — |
| Variovorax sp. SCN45 | 0.16 | GFF3255 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase (EC 2.1.1.193) | 0.45 | GFF5112 | | Glutathione peroxidase (EC 1.11.1.9) @ Thioredoxin peroxidase (EC 1.11.1.15) | low | > 127 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.16 | CA264_05265 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.41 | CA264_01615 | | glutathione peroxidase | low | > 74 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.16 | GFF3048 | | Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) | 0.35 | GFF3530 | | Glutathione peroxidase family protein | — | — |
| Klebsiella michiganensis M5al | 0.16 | BWI76_RS24070 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.33 | BWI76_RS17100 | | glutathione peroxidase | low | > 92 |
| Shewanella sp. ANA-3 | 0.16 | Shewana3_3444 | | 16S ribosomal RNA methyltransferase RsmE (RefSeq) | 0.45 | Shewana3_2875 | | glutathione peroxidase (RefSeq) | low | > 73 |
| Serratia liquefaciens MT49 | 0.16 | IAI46_21385 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.42 | IAI46_11100 | | glutathione peroxidase | low | > 86 |
| Enterobacter sp. TBS_079 | 0.16 | MPMX20_03804 | | Ribosomal RNA small subunit methyltransferase E | 0.44 | MPMX20_01160 | | Hydroperoxy fatty acid reductase gpx1 | low | > 85 |
| Cellulophaga baltica 18 | 0.16 | M666_RS12115 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.39 | M666_RS14240 | | glutathione peroxidase | low | > 67 |
| Shewanella amazonensis SB2B | 0.16 | Sama_0575 | | 16S ribosomal RNA methyltransferase RsmE (RefSeq) | 0.44 | Sama_1080 | | glutathione peroxidase (RefSeq) | low | > 62 |
| Shewanella oneidensis MR-1 | 0.16 | SO0832 | | conserved hypothetical protein TIGR00046 (NCBI ptt file) | 0.46 | SO1563 | | glutathione peroxidase, putative (NCBI ptt file) | low | > 76 |
| Enterobacter asburiae PDN3 | 0.16 | EX28DRAFT_2984 | | RNA methyltransferase, RsmE family | 0.47 | EX28DRAFT_1405 | | Glutathione peroxidase | low | > 76 |
| Rahnella sp. WP5 | 0.16 | EX31_RS02660 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.43 | EX31_RS17585 | | glutathione peroxidase | low | > 89 |
| Ralstonia solanacearum IBSBF1503 | 0.16 | RALBFv3_RS05880 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.44 | RALBFv3_RS05530 | | glutathione peroxidase | low | > 76 |
| Ralstonia solanacearum UW163 | 0.16 | UW163_RS07745 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.44 | UW163_RS08095 | | glutathione peroxidase | — | — |
| Ralstonia solanacearum GMI1000 | 0.16 | RS_RS13825 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.45 | RS_RS13390 | | glutathione peroxidase | low | > 80 |
| Shewanella loihica PV-4 | 0.15 | Shew_3224 | | hypothetical protein (RefSeq) | 0.41 | Shew_2741 | | glutathione peroxidase (RefSeq) | low | > 60 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.15 | CA265_RS23620 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.43 | CA265_RS14475 | | glutathione peroxidase | low | > 88 |
| Burkholderia phytofirmans PsJN | 0.15 | BPHYT_RS16855 | | 16S rRNA methyltransferase | 0.46 | BPHYT_RS12215 | | glutathione peroxidase | low | > 109 |
| Ralstonia solanacearum PSI07 | 0.15 | RPSI07_RS11365 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.45 | RPSI07_RS11770 | | glutathione peroxidase | low | > 81 |
| Bacteroides ovatus ATCC 8483 | 0.15 | BACOVA_05130 | | RNA methyltransferase, RsmE family | 0.41 | BACOVA_04616 | | glutathione peroxidase | low | > 94 |
| Ralstonia sp. UNC404CL21Col | 0.15 | ABZR87_RS01505 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.45 | ABZR87_RS01180 | | glutathione peroxidase | low | > 80 |
| Dickeya dadantii 3937 | 0.14 | DDA3937_RS18555 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.35 | DDA3937_RS12960 | | glutathione peroxidase | low | > 74 |
| Lysobacter sp. OAE881 | 0.14 | ABIE51_RS05260 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.46 | ABIE51_RS09170 | | glutathione peroxidase | low | > 62 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.14 | Echvi_3055 | | RNA methyltransferase, RsmE family | 0.43 | Echvi_2466 | | Glutathione peroxidase | 0.26 | 43 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.14 | BT4328 | | conserved hypothetical protein (NCBI ptt file) | 0.40 | BT3971 | | glutathione peroxidase (NCBI ptt file) | low | > 81 |
| Dickeya dianthicola ME23 | 0.14 | DZA65_RS19625 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.35 | DZA65_RS13495 | | glutathione peroxidase | low | > 75 |
| Phocaeicola dorei CL03T12C01 | 0.14 | ABI39_RS18150 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.44 | ABI39_RS17600 | | glutathione peroxidase | low | > 72 |
| Dickeya dianthicola 67-19 | 0.14 | HGI48_RS18490 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.35 | HGI48_RS13030 | | glutathione peroxidase | low | > 71 |
| Phocaeicola vulgatus CL09T03C04 | 0.14 | HMPREF1058_RS05940 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.43 | HMPREF1058_RS03555 | | glutathione peroxidase | low | > 67 |
| Pectobacterium carotovorum WPP14 | 0.13 | HER17_RS02640 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.39 | HER17_RS08825 | | glutathione peroxidase | 0.63 | 4 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.12 | ABZR88_RS17085 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.46 | ABZR88_RS20575 | | glutathione peroxidase | low | > 71 |
| Cupriavidus basilensis FW507-4G11 | 0.12 | RR42_RS17590 | | 16S rRNA methyltransferase | 0.45 | RR42_RS17340 | | glutathione peroxidase | low | > 128 |
Not shown: 11 genomes with orthologs for MPMX19_00577 only; 3 genomes with orthologs for MPMX19_02462 only