| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Serratia liquefaciens MT49 | 1.0 | IAI46_05245 | | molecular chaperone HtpG | 1.0 | IAI46_22775 | | tRNA dihydrouridine synthase DusB | 0.60 | 5 |
| Rahnella sp. WP5 | 0.90 | EX31_RS22530 | | molecular chaperone HtpG | 0.95 | EX31_RS12180 | | tRNA dihydrouridine synthase DusB | 0.45 | 82 |
| Pectobacterium carotovorum WPP14 | 0.89 | HER17_RS15690 | | molecular chaperone HtpG | 0.91 | HER17_RS20235 | | tRNA dihydrouridine synthase DusB | low | > 75 |
| Dickeya dadantii 3937 | 0.88 | DDA3937_RS05795 | | molecular chaperone HtpG | 0.91 | DDA3937_RS01375 | | tRNA dihydrouridine synthase DusB | low | > 74 |
| Dickeya dianthicola 67-19 | 0.88 | HGI48_RS05845 | | molecular chaperone HtpG | 0.91 | HGI48_RS01295 | | tRNA dihydrouridine synthase DusB | low | > 71 |
| Dickeya dianthicola ME23 | 0.88 | DZA65_RS06170 | | molecular chaperone HtpG | 0.92 | DZA65_RS01355 | | tRNA dihydrouridine synthase DusB | low | > 75 |
| Escherichia coli ECRC101 | 0.87 | MCAODC_27375 | htpG | molecular chaperone HtpG | 0.89 | MCAODC_08205 | dusB | tRNA dihydrouridine synthase DusB | — | — |
| Escherichia fergusonii Becca | 0.87 | EFB2_03585 | | Chaperone protein HtpG | 0.89 | EFB2_00564 | | tRNA-dihydrouridine synthase B | low | > 86 |
| Escherichia coli BW25113 | 0.87 | b0473 | htpG | heat shock protein 90 (NCBI) | 0.89 | b3260 | dusB | tRNA-dihydrouridine synthase B (NCBI) | low | > 76 |
| Escherichia coli ECRC99 | 0.87 | KEDOAH_19815 | htpG | molecular chaperone HtpG | 0.81 | KEDOAH_10465 | dusB | tRNA dihydrouridine synthase DusB | — | — |
| Escherichia coli BL21 | 0.87 | ECD_00424 | | protein refolding molecular co-chaperone Hsp90, Hsp70-dependent; heat-shock protein; ATPase | 0.89 | ECD_03118 | | tRNA-dihydrouridine synthase B | low | > 60 |
| Escherichia coli ECRC62 | 0.87 | BNILDI_22500 | htpG | molecular chaperone HtpG | 0.89 | BNILDI_02050 | dusB | tRNA dihydrouridine synthase DusB | — | — |
| Escherichia coli ECRC102 | 0.87 | NIAGMN_06205 | htpG | molecular chaperone HtpG | 0.89 | NIAGMN_15445 | dusB | tRNA dihydrouridine synthase DusB | — | — |
| Escherichia coli ECRC101 | 0.87 | OKFHMN_08150 | htpG | molecular chaperone HtpG | 0.89 | OKFHMN_17685 | dusB | tRNA dihydrouridine synthase DusB | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.87 | OHPLBJKB_03201 | | Chaperone protein HtpG | 0.80 | OHPLBJKB_00445 | | putative tRNA-dihydrouridine synthase | low | > 73 |
| Escherichia coli ECRC98 | 0.87 | JDDGAC_11800 | htpG | molecular chaperone HtpG | 0.81 | JDDGAC_21310 | dusB | tRNA dihydrouridine synthase DusB | — | — |
| Escherichia coli ECOR27 | 0.87 | NOLOHH_01080 | htpG | molecular chaperone HtpG | 0.89 | NOLOHH_09470 | dusB | tRNA dihydrouridine synthase DusB | low | > 57 |
| Escherichia coli ECOR38 | 0.87 | HEPCGN_06765 | htpG | molecular chaperone HtpG | 0.89 | HEPCGN_16505 | dusB | tRNA dihydrouridine synthase DusB | low | > 85 |
| Escherichia coli Nissle 1917 | 0.87 | ECOLIN_RS02810 | | molecular chaperone HtpG | 0.89 | ECOLIN_RS18725 | | tRNA dihydrouridine synthase DusB | low | > 52 |
| Klebsiella michiganensis M5al | 0.87 | BWI76_RS06835 | | molecular chaperone HtpG | 0.89 | BWI76_RS25565 | | tRNA dihydrouridine synthase DusB | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.87 | GFF4391 | | Chaperone protein HtpG | 0.80 | GFF2124 | | tRNA dihydrouridine synthase B (EC 1.-.-.-) | low | > 78 |
| Enterobacter sp. TBS_079 | 0.87 | MPMX20_01075 | | Chaperone protein HtpG | 0.89 | MPMX20_04169 | | tRNA-dihydrouridine synthase B | 0.25 | 25 |
| Enterobacter asburiae PDN3 | 0.86 | EX28DRAFT_2484 | | Molecular chaperone, HSP90 family | 0.88 | EX28DRAFT_3313 | | putative TIM-barrel protein, nifR3 family | low | > 76 |
| Pantoea sp. MT58 | 0.85 | IAI47_14460 | | molecular chaperone HtpG | 0.86 | IAI47_02385 | | tRNA dihydrouridine synthase DusB | low | > 76 |
| Vibrio cholerae E7946 ATCC 55056 | 0.70 | CSW01_05030 | | molecular chaperone HtpG | 0.68 | CSW01_01495 | | tRNA dihydrouridine synthase DusB | low | > 62 |
| Alteromonas macleodii MIT1002 | 0.69 | MIT1002_02648 | | High temperature protein G | 0.69 | MIT1002_03957 | | putative tRNA-dihydrouridine synthase | low | > 70 |
| Shewanella loihica PV-4 | 0.68 | Shew_2232 | | heat shock protein 90 (RefSeq) | 0.66 | Shew_0330 | | nifR3 family TIM-barrel protein (RefSeq) | low | > 60 |
| Shewanella amazonensis SB2B | 0.67 | Sama_1313 | | heat shock protein 90 (RefSeq) | 0.70 | Sama_3225 | | tRNA-dihydrouridine synthase B (RefSeq) | low | > 62 |
| Shewanella oneidensis MR-1 | 0.67 | SO2016 | htpG | heat shock protein HtpG (NCBI ptt file) | 0.65 | SO0394 | | conserved hypothetical protein (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.66 | Shewana3_2443 | | heat shock protein 90 (RefSeq) | 0.65 | Shewana3_0399 | | nifR3 family TIM-barrel protein (RefSeq) | low | > 73 |
| Kangiella aquimarina DSM 16071 | 0.63 | B158DRAFT_2484 | | Molecular chaperone, HSP90 family | 0.65 | B158DRAFT_0164 | | tRNA-U20-dihydrouridine synthase | low | > 40 |
| Paraburkholderia sabiae LMG 24235 | 0.62 | QEN71_RS24640 | | molecular chaperone HtpG | 0.54 | QEN71_RS26770 | | tRNA dihydrouridine synthase DusB | low | > 153 |
| Castellaniella sp019104865 MT123 | 0.62 | ABCV34_RS09065 | | molecular chaperone HtpG | 0.52 | ABCV34_RS07960 | | tRNA dihydrouridine synthase DusB | low | > 48 |
| Pseudomonas sp. S08-1 | 0.62 | OH686_00400 | | Chaperone protein HtpG | 0.58 | OH686_07610 | | tRNA-dihydrouridine synthase DusB | low | > 80 |
| Pseudomonas fluorescens FW300-N2C3 | 0.62 | AO356_19745 | | heat-shock protein Hsp90 | 0.55 | AO356_08215 | | tRNA-dihydrouridine synthase B | low | > 104 |
| Pseudomonas fluorescens GW456-L13 | 0.62 | PfGW456L13_4258 | | Chaperone protein HtpG | 0.54 | PfGW456L13_55 | | tRNA dihydrouridine synthase B (EC 1.-.-.-) | low | > 87 |
| Pseudomonas stutzeri RCH2 | 0.62 | Psest_2484 | | Molecular chaperone, HSP90 family | 0.56 | Psest_1016 | | putative TIM-barrel protein, nifR3 family | low | > 67 |
| Pseudomonas fluorescens FW300-N2E2 | 0.62 | Pf6N2E2_5865 | | Chaperone protein HtpG | 0.55 | Pf6N2E2_3517 | | tRNA dihydrouridine synthase B (EC 1.-.-.-) | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.62 | ABIE53_001402 | | molecular chaperone HtpG | 0.54 | ABIE53_003489 | | tRNA-dihydrouridine synthase B | low | > 113 |
| Pseudomonas sp. RS175 | 0.62 | PFR28_03086 | | Chaperone protein HtpG | 0.55 | PFR28_05216 | | tRNA-dihydrouridine synthase B | low | > 88 |
| Pseudomonas putida KT2440 | 0.61 | PP_4179 | | Chaperone protein HtpG | 0.59 | PP_4820 | | tRNA-dihydrouridine synthase B | low | > 96 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.61 | Psyr_2017 | | Heat shock protein Hsp90:ATP-binding region, ATPase-like protein | 0.54 | Psyr_4404 | | tRNA-U20-dihydrouridine synthase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.61 | Psyr_2017 | | Heat shock protein Hsp90:ATP-binding region, ATPase-like protein | 0.54 | Psyr_4404 | | tRNA-U20-dihydrouridine synthase | low | > 86 |
| Pseudomonas fluorescens FW300-N2E3 | 0.61 | AO353_01780 | | heat-shock protein Hsp90 | 0.55 | AO353_13660 | | tRNA-dihydrouridine synthase B | low | > 101 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.61 | H281DRAFT_00274 | | molecular chaperone HtpG | 0.54 | H281DRAFT_04249 | | tRNA-U20-dihydrouridine synthase | low | > 103 |
| Marinobacter adhaerens HP15 | 0.61 | HP15_1395 | | heat shock protein 90 | 0.59 | HP15_3225 | | tRNA-dihydrouridine synthase B | low | > 73 |
| Ralstonia sp. UNC404CL21Col | 0.61 | ABZR87_RS09840 | | molecular chaperone HtpG | 0.55 | ABZR87_RS07650 | | tRNA dihydrouridine synthase DusB | low | > 80 |
| Pseudomonas fluorescens FW300-N1B4 | 0.61 | Pf1N1B4_3692 | | Chaperone protein HtpG | 0.54 | Pf1N1B4_1313 | | tRNA dihydrouridine synthase B (EC 1.-.-.-) | low | > 87 |
| Herbaspirillum seropedicae SmR1 | 0.61 | HSERO_RS08990 | | heat shock protein 90 | 0.51 | HSERO_RS02050 | | tRNA-dihydrouridine synthase B | low | > 78 |
| Burkholderia phytofirmans PsJN | 0.61 | BPHYT_RS05980 | | heat shock protein 90 | 0.53 | BPHYT_RS16585 | | tRNA-dihydrouridine synthase B | low | > 109 |
| Cupriavidus basilensis FW507-4G11 | 0.60 | RR42_RS14555 | | heat-shock protein Hsp90 | 0.52 | RR42_RS02730 | | tRNA-dihydrouridine synthase B | low | > 128 |
| Pseudomonas fluorescens SBW25 | 0.60 | PFLU_RS09005 | | molecular chaperone HtpG | 0.53 | PFLU_RS03025 | | tRNA dihydrouridine synthase DusB | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.60 | PFLU_RS09005 | | molecular chaperone HtpG | 0.53 | PFLU_RS03025 | | tRNA dihydrouridine synthase DusB | low | > 109 |
| Pseudomonas simiae WCS417 | 0.60 | PS417_08945 | | heat shock protein 90 | 0.53 | PS417_02950 | | tRNA-dihydrouridine synthase B | low | > 88 |
| Ralstonia solanacearum GMI1000 | 0.60 | RS_RS04900 | | molecular chaperone HtpG | 0.54 | RS_RS02515 | | tRNA dihydrouridine synthase DusB | low | > 80 |
| Ralstonia solanacearum UW163 | 0.60 | UW163_RS15690 | | molecular chaperone HtpG | 0.55 | UW163_RS01890 | | tRNA dihydrouridine synthase DusB | — | — |
| Dechlorosoma suillum PS | 0.60 | Dsui_3003 | | molecular chaperone of HSP90 family | 0.52 | Dsui_1593 | | putative TIM-barrel protein, nifR3 family | low | > 51 |
| Ralstonia solanacearum IBSBF1503 | 0.60 | RALBFv3_RS14120 | | molecular chaperone HtpG | 0.55 | RALBFv3_RS11695 | | tRNA dihydrouridine synthase DusB | low | > 76 |
| Ralstonia solanacearum PSI07 | 0.60 | RPSI07_RS19340 | | molecular chaperone HtpG | 0.55 | RPSI07_RS21520 | | tRNA dihydrouridine synthase DusB | low | > 81 |
| Variovorax sp. SCN45 | 0.57 | GFF3546 | | Chaperone protein HtpG | 0.54 | GFF2144 | | tRNA-dihydrouridine synthase DusB | low | > 127 |
| Variovorax sp. OAS795 | 0.56 | ABID97_RS00945 | | molecular chaperone HtpG | 0.55 | ABID97_RS24735 | | tRNA dihydrouridine synthase DusB | low | > 91 |
| Acidovorax sp. GW101-3H11 | 0.56 | Ac3H11_4646 | | Chaperone protein HtpG | 0.50 | Ac3H11_3996 | | tRNA dihydrouridine synthase B (EC 1.-.-.-) | low | > 79 |
| Dyella japonica UNC79MFTsu3.2 | 0.55 | ABZR86_RS00585 | | molecular chaperone HtpG | 0.51 | ABZR86_RS11525 | | tRNA dihydrouridine synthase DusB | low | > 74 |
| Rhodanobacter sp. FW510-T8 | 0.54 | OKGIIK_03650 | htpG | molecular chaperone HtpG | 0.52 | OKGIIK_11770 | dusB | tRNA dihydrouridine synthase DusB | low | > 52 |
| Acinetobacter radioresistens SK82 | 0.54 | MPMX26_00218 | | Chaperone protein HtpG | 0.51 | MPMX26_02127 | | tRNA-dihydrouridine synthase B | low | > 36 |
| Rhodanobacter denitrificans MT42 | 0.54 | LRK55_RS14545 | | molecular chaperone HtpG | 0.52 | LRK55_RS11875 | | tRNA dihydrouridine synthase DusB | 0.47 | 55 |
| Rhodanobacter denitrificans FW104-10B01 | 0.54 | LRK54_RS14830 | | molecular chaperone HtpG | 0.52 | LRK54_RS12140 | | tRNA dihydrouridine synthase DusB | low | > 59 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.54 | GFF346 | | Chaperone protein HtpG | 0.47 | GFF634 | | tRNA dihydrouridine synthase B (EC 1.-.-.-) | low | > 90 |
| Magnetospirillum magneticum AMB-1 | 0.44 | AMB_RS21970 | | molecular chaperone HtpG | 0.40 | AMB_RS11940 | | tRNA dihydrouridine synthase DusB | low | > 64 |
| Rhodospirillum rubrum S1H | 0.44 | Rru_A0072 | | chaperone protein Hsp90 (NCBI) | 0.33 | Rru_A1676 | | Dihydrouridine synthase TIM-barrel protein nifR3 (NCBI) | — | — |
| Azospirillum brasilense Sp245 | 0.44 | AZOBR_RS00990 | | heat shock protein Hsp90 | 0.40 | AZOBR_RS14420 | | tRNA-dihydrouridine synthase | low | > 97 |
| Azospirillum sp. SherDot2 | 0.44 | MPMX19_00249 | | Chaperone protein HtpG | 0.40 | MPMX19_01110 | | tRNA-dihydrouridine synthase B | low | > 112 |
| Mycobacterium tuberculosis H37Rv | 0.42 | Rv2299c | | Probable chaperone protein HtpG (heat shock protein) (HSP90 family protein) (high temperature protein G) | 0.26 | Rv0823c | | Possible transcriptional regulatory protein | low | > 58 |
| Sinorhizobium meliloti 1021 | 0.39 | SM_b21183 | | molecular chaperone HtpG | 0.35 | SMc01041 | | NIFR3-like protein | low | > 103 |
| Rhizobium sp. OAE497 | 0.38 | ABIE40_RS29015 | | molecular chaperone HtpG | 0.34 | ABIE40_RS09080 | | tRNA dihydrouridine synthase DusB | low | > 107 |
| Rhodopseudomonas palustris CGA009 | 0.38 | TX73_025025 | | molecular chaperone HtpG | 0.34 | TX73_013410 | | tRNA dihydrouridine synthase DusB | low | > 86 |
| Fusobacterium nucleatum SB010 | 0.37 | HUW76_02870 | | molecular chaperone HtpG | 0.26 | HUW76_04330 | | tRNA-dihydrouridine synthase | low | > 35 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.34 | DVU2643 | htpG | heat shock protein HtpG (TIGR) | 0.19 | DVU0661 | | dihydrouridine synthase family protein (TIGR) | low | > 55 |
| Synechococcus elongatus PCC 7942 | 0.20 | Synpcc7942_1813 | htpG | heat shock protein 90 | 0.24 | Synpcc7942_0283 | | Dihydrouridine synthase TIM-barrel protein nifR3 | low | > 38 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.20 | CA264_16420 | | molecular chaperone HtpG | 0.30 | CA264_17860 | | tRNA dihydrouridine synthase DusB | low | > 74 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.19 | BT0897 | | chaperone protein htpG (heat shock protein htpG) (NCBI ptt file) | 0.34 | BT3073 | | putative TIM-barrel enzyme, possible dehydrogenase, contains a highly conserved dihydrouridine synthase domain (NCBI ptt file) | low | > 81 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.19 | CA265_RS17675 | | molecular chaperone HtpG | 0.30 | CA265_RS21125 | | tRNA dihydrouridine synthase DusB | low | > 88 |
| Phocaeicola vulgatus CL09T03C04 | 0.19 | HMPREF1058_RS04010 | | molecular chaperone HtpG | 0.33 | HMPREF1058_RS10945 | | tRNA dihydrouridine synthase DusB | low | > 67 |
| Phocaeicola dorei CL03T12C01 | 0.19 | ABI39_RS17210 | | molecular chaperone HtpG | 0.34 | ABI39_RS06125 | | tRNA dihydrouridine synthase DusB | low | > 72 |
| Bacteroides ovatus ATCC 8483 | 0.18 | BACOVA_00720 | | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein | 0.34 | BACOVA_02724 | | TIM-barrel protein, nifR3 family | low | > 94 |
Not shown: 3 genomes with orthologs for IAI46_05245 only; 12 genomes with orthologs for IAI46_22775 only