Conservation of cofitness between HSERO_RS07150 and HSERO_RS02130 in Herbaspirillum seropedicae SmR1

86 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS07150 apolipoprotein acyltransferase 1.0 HSERO_RS02130 thiazole synthase 0.48 1
Paraburkholderia sabiae LMG 24235 0.68 QEN71_RS26550 carbon-nitrogen hydrolase family protein 0.34 QEN71_RS27930 thiazole synthase — —
Paraburkholderia graminis OAS925 0.68 ABIE53_000852 putative amidohydrolase 0.34 ABIE53_003714 thiazole synthase — —
Burkholderia phytofirmans PsJN 0.68 BPHYT_RS03545 apolipoprotein acyltransferase 0.35 BPHYT_RS17775 thiazole synthase — —
Paraburkholderia bryophila 376MFSha3.1 0.68 H281DRAFT_04689 nitrilase 0.34 H281DRAFT_05639 thiazole-phosphate synthase — —
Cupriavidus basilensis FW507-4G11 0.64 RR42_RS05880 acyltransferase 0.32 RR42_RS01305 thiazole synthase — —
Ralstonia solanacearum GMI1000 0.62 RS_RS13310 carbon-nitrogen hydrolase family protein 0.34 RS_RS00535 thiazole synthase — —
Castellaniella sp019104865 MT123 0.62 ABCV34_RS02585 carbon-nitrogen hydrolase family protein 0.73 ABCV34_RS14510 thiazole synthase — —
Ralstonia solanacearum PSI07 0.62 RPSI07_RS11855 carbon-nitrogen hydrolase family protein 0.34 RPSI07_RS23435 thiazole synthase — —
Ralstonia solanacearum IBSBF1503 0.61 RALBFv3_RS05450 carbon-nitrogen hydrolase family protein 0.33 RALBFv3_RS09925 thiazole synthase — —
Ralstonia solanacearum UW163 0.61 UW163_RS08175 carbon-nitrogen hydrolase family protein 0.33 UW163_RS03655 thiazole synthase — —
Ralstonia sp. UNC404CL21Col 0.61 ABZR87_RS01100 carbon-nitrogen hydrolase family protein 0.34 ABZR87_RS04800 thiazole synthase — —
Dechlorosoma suillum PS 0.59 Dsui_3402 putative amidohydrolase 0.75 Dsui_1014 putative enzyme of thiazole biosynthesis — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.53 GFF2535 FIG003879: Predicted amidohydrolase 0.35 GFF246 Thiazole biosynthesis protein ThiG — —
Acidovorax sp. GW101-3H11 0.51 Ac3H11_1207 FIG003879: Predicted amidohydrolase 0.32 Ac3H11_1059 Thiazole biosynthesis protein ThiG — —
Variovorax sp. SCN45 0.50 GFF5445 FIG003879: Uncharacterized subgroup of the nitrilase superfamily 0.33 GFF1188 Thiazole synthase (EC 2.8.1.10) low > 127
Variovorax sp. OAS795 0.49 ABID97_RS02000 carbon-nitrogen hydrolase family protein 0.35 ABID97_RS15315 thiazole synthase low > 91
Pseudomonas sp. S08-1 0.44 OH686_08585 Uncharacterized subgroup of the nitrilase superfamily 0.67 OH686_14285 Thiazole synthase low > 80
Pseudomonas syringae pv. syringae B728a 0.42 Psyr_4157 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 0.65 Psyr_4740 thiazole-phosphate synthase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.42 Psyr_4157 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 0.65 Psyr_4740 thiazole-phosphate synthase low > 86
Alteromonas macleodii MIT1002 0.42 MIT1002_00226 (R)-stereoselective amidase 0.36 MIT1002_00093 Thiazole synthase low > 70
Pseudomonas sp. RS175 0.41 PFR28_00160 Deaminated glutathione amidase 0.67 PFR28_04252 Thiazole synthase low > 88
Pseudomonas fluorescens GW456-L13 0.41 PfGW456L13_5027 FIG003879: Predicted amidohydrolase / Omega amidase (Nit2 homolog) 0.66 PfGW456L13_1000 Thiazole biosynthesis protein ThiG low > 87
Marinobacter adhaerens HP15 0.41 HP15_2449 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 0.68 HP15_3274 thiazole synthase — —
Pseudomonas fluorescens FW300-N2C3 0.41 AO356_07100 carbon-nitrogen hydrolase 0.67 AO356_13375 thiazole synthase low > 104
Pseudomonas fluorescens FW300-N2E2 0.41 Pf6N2E2_3281 FIG003879: Predicted amidohydrolase / Omega amidase (Nit2 homolog) 0.67 Pf6N2E2_4590 Thiazole biosynthesis protein ThiG low > 103
Pseudomonas fluorescens FW300-N1B4 0.41 Pf1N1B4_1093 FIG003879: Predicted amidohydrolase / Omega amidase (Nit2 homolog) 0.66 Pf1N1B4_2331 Thiazole biosynthesis protein ThiG low > 87
Pseudomonas fluorescens SBW25 0.40 PFLU_RS04335 carbon-nitrogen hydrolase family protein 0.65 PFLU_RS28420 thiazole synthase low > 109
Pseudomonas simiae WCS417 0.40 PS417_04280 carbon-nitrogen hydrolase 0.65 PS417_26775 thiazole synthase low > 88
Pseudomonas fluorescens SBW25-INTG 0.40 PFLU_RS04335 carbon-nitrogen hydrolase family protein 0.65 PFLU_RS28420 thiazole synthase low > 109
Pseudomonas stutzeri RCH2 0.40 Psest_3321 Predicted amidohydrolase 0.68 Psest_0267 Uncharacterized enzyme of thiazole biosynthesis low > 67
Vibrio cholerae E7946 ATCC 55056 0.40 CSW01_02215 carbon-nitrogen hydrolase family protein 0.40 CSW01_00355 thiazole synthase low > 62
Pseudomonas fluorescens FW300-N2E3 0.40 AO353_05220 carbon-nitrogen hydrolase 0.66 AO353_08215 thiazole synthase low > 101
Pseudomonas putida KT2440 0.39 PP_0939 Carbon-nitrogen hydrolase family protein 0.65 PP_5104 thiazole synthase low > 96
Shewanella loihica PV-4 0.39 Shew_0409 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (RefSeq) 0.35 Shew_2092 thiazole biosynthesis family protein (RefSeq) low > 60
Kangiella aquimarina DSM 16071 0.38 B158DRAFT_2071 Predicted amidohydrolase 0.33 B158DRAFT_0291 thiazole-phosphate synthase low > 40
Serratia liquefaciens MT49 0.37 IAI46_22690 carbon-nitrogen hydrolase family protein 0.37 IAI46_01300 thiazole synthase low > 86
Synechococcus elongatus PCC 7942 0.36 Synpcc7942_2358 nitrilase-like 0.43 Synpcc7942_0576 thiG thiazole synthase — —
Azospirillum brasilense Sp245 0.36 AZOBR_RS02920 amidohydrolase 0.41 AZOBR_RS30960 thiazole synthase — —
Rhodopseudomonas palustris CGA009 0.36 TX73_003100 carbon-nitrogen hydrolase family protein 0.33 TX73_018530 thiazole synthase — —
Azospirillum sp. SherDot2 0.35 MPMX19_02429 Deaminated glutathione amidase 0.46 MPMX19_00262 Thiazole synthase low > 112
Phaeobacter inhibens DSM 17395 0.35 PGA1_c34700 putative carbon-nitrogen hydrolase 0.31 PGA1_c09070 thiazole biosynthesis protein ThiG low > 62
Shewanella sp. ANA-3 0.35 Shewana3_3642 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (RefSeq) 0.37 Shewana3_1940 thiG thiazole synthase (RefSeq) low > 73
Sinorhizobium meliloti 1021 0.34 SMc02442 hydrolase 0.25 SM_b20617 thiazole synthase — —
Shewanella oneidensis MR-1 0.34 SO4092 hydrolase, carbon-nitrogen family (NCBI ptt file) 0.37 SO2441 thiG thiG protein (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.33 Sama_0473 carbon-nitrogen family hydrolase (RefSeq) 0.39 Sama_1856 thiG thiazole synthase (RefSeq) low > 62
Agrobacterium fabrum C58 0.33 Atu3510 amidohydrolase 0.30 Atu2566 thiamin biosynthesis ThiG low > 89
Acinetobacter radioresistens SK82 0.33 MPMX26_00580 Deaminated glutathione amidase 0.66 MPMX26_01107 Thiazole synthase low > 36
Caulobacter crescentus NA1000 0.31 CCNA_00871 carbon-nitrogen hydrolase family protein 0.60 CCNA_01957 thiazole biosynthesis protein ThiG — —
Caulobacter crescentus NA1000 Δfur 0.31 CCNA_00871 carbon-nitrogen hydrolase family protein 0.60 CCNA_01957 thiazole biosynthesis protein ThiG — —
Brevundimonas sp. GW460-12-10-14-LB2 0.30 A4249_RS13565 carbon-nitrogen hydrolase family protein 0.54 A4249_RS07975 thiazole synthase — —
Dinoroseobacter shibae DFL-12 0.29 Dshi_3506 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (RefSeq) 0.28 Dshi_0912 thiazole biosynthesis family protein (RefSeq) low > 64
Erwinia tracheiphila SCR3 0.24 LU632_RS16420 deaminated glutathione amidase 0.35 LU632_RS00950 thiazole synthase low > 74
Pantoea sp. MT58 0.21 IAI47_14065 deaminated glutathione amidase 0.30 IAI47_20700 thiazole synthase low > 76
Dickeya dianthicola 67-19 0.21 HGI48_RS19475 deaminated glutathione amidase 0.39 HGI48_RS01150 thiazole synthase low > 71
Klebsiella michiganensis M5al 0.21 BWI76_RS07990 carbon-nitrogen hydrolase 0.38 BWI76_RS01535 thiazole synthase — —
Enterobacter asburiae PDN3 0.21 EX28DRAFT_2337 Predicted amidohydrolase 0.38 EX28DRAFT_4532 Uncharacterized enzyme of thiazole biosynthesis low > 76
Escherichia coli ECRC62 0.20 BNILDI_21795 tatE deaminated glutathione amidase 0.38 BNILDI_05985 thiG thiazole synthase low > 75
Escherichia coli ECRC101 0.19 MCAODC_26625 tatE deaminated glutathione amidase 0.38 MCAODC_03895 thiG thiazole synthase low > 87
Escherichia coli ECRC99 0.19 KEDOAH_20560 tatE deaminated glutathione amidase 0.38 KEDOAH_14765 thiG thiazole synthase — —
Escherichia coli ECRC100 0.19 OKFHMN_07410 tatE deaminated glutathione amidase 0.38 OKFHMN_13395 thiG thiazole synthase low > 80
Escherichia coli ECOR27 0.19 NOLOHH_23785 tatE deaminated glutathione amidase 0.38 NOLOHH_05540 thiG thiazole synthase low > 75
Escherichia coli BL21 0.19 ECD_00595 putative NAD(P)-binding amidase-type enzyme YbeM (C-N hydrolase family) 0.38 ECD_03867 thiamine biosynthesis ThiGH complex subunit low > 61
Escherichia coli ECRC102 0.19 NIAGMN_05465 tatE deaminated glutathione amidase 0.38 NIAGMN_11145 thiG thiazole synthase — —
Escherichia coli ECRC98 0.19 JDDGAC_11055 tatE deaminated glutathione amidase 0.38 JDDGAC_17020 thiG thiazole synthase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.19 OHPLBJKB_03080 Deaminated glutathione amidase 0.38 OHPLBJKB_04060 Thiazole synthase low > 73
Escherichia coli ECOR38 0.19 HEPCGN_00865 tatE deaminated glutathione amidase 0.39 HEPCGN_12030 thiG thiazole synthase low > 87
Escherichia coli Nissle 1917 0.19 ECOLIN_RS03410 deaminated glutathione amidase 0.37 ECOLIN_RS23020 thiazole synthase — —
Rahnella sp. WP5 0.19 EX31_RS23065 deaminated glutathione amidase 0.38 EX31_RS16795 thiazole synthase low > 89
Escherichia fergusonii Becca 0.19 EFB2_03466 Deaminated glutathione amidase 0.38 EFB2_04621 Thiazole synthase low > 86
Enterobacter sp. TBS_079 0.18 MPMX20_01285 Deaminated glutathione amidase 0.38 MPMX20_00213 Thiazole synthase low > 85
Pectobacterium carotovorum WPP14 0.18 HER17_RS17575 deaminated glutathione amidase 0.38 HER17_RS20400 thiazole synthase low > 75
Dickeya dadantii 3937 0.18 DDA3937_RS06130 deaminated glutathione amidase 0.39 DDA3937_RS01155 thiazole synthase low > 74
Dickeya dianthicola ME23 0.18 DZA65_RS06520 deaminated glutathione amidase 0.39 DZA65_RS01195 thiazole synthase low > 75
Pedobacter sp. GW460-11-11-14-LB5 0.17 CA265_RS08135 amidohydrolase 0.40 CA265_RS20180 thiazole synthase low > 88
Mycobacterium tuberculosis H37Rv 0.16 Rv0480c Possible amidohydrolase 0.40 Rv0417 Probable thiamin biosynthesis protein ThiG (thiazole biosynthesis protein) — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.16 GFF4538 Aliphatic amidase AmiE (EC 3.5.1.4) 0.37 GFF4202 Thiazole biosynthesis protein ThiG low > 78
Xanthomonas campestris pv. campestris strain 8004 0.16 Xcc-8004.2374.1 N-carbamoylputrescine amidase (3.5.1.53) / Aliphatic amidase AmiE (EC 3.5.1.4) 0.69 Xcc-8004.1284.1 Thiazole biosynthesis protein ThiG — —
Lysobacter sp. OAE881 0.15 ABIE51_RS09320 carbon-nitrogen hydrolase 0.65 ABIE51_RS16545 thiazole synthase — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.15 ABZR88_RS18075 carbon-nitrogen hydrolase 0.36 ABZR88_RS08825 thiazole synthase — —
Bosea sp. OAE506 0.14 ABIE41_RS12325 N-carbamoyl-D-amino-acid hydrolase 0.32 ABIE41_RS20185 thiazole synthase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.14 Echvi_1887 Predicted amidohydrolase 0.38 Echvi_3564 Uncharacterized enzyme of thiazole biosynthesis low > 79
Bacteroides thetaiotaomicron VPI-5482 0.14 BT0259 putative amidohydrolase (NCBI ptt file) 0.37 BT0651 thiamine biosynthesis protein ThiG (NCBI ptt file) low > 81
Bacteroides ovatus ATCC 8483 0.14 BACOVA_00412 hydrolase, carbon-nitrogen family 0.38 BACOVA_02359 thiazole biosynthesis protein ThiG low > 94
Dyella japonica UNC79MFTsu3.2 0.13 ABZR86_RS02765 carbon-nitrogen hydrolase 0.71 ABZR86_RS11645 thiazole synthase — —
Escherichia coli BW25113 0.12 b0219 yafV predicted C-N hydrolase family amidase, NAD(P)-binding (NCBI) 0.39 b3991 thiG thiamin biosynthesis, thiazole moiety (VIMSS) low > 76
Rhodanobacter sp. FW510-T8 0.12 OKGIIK_06395 nit2 amidohydrolase 0.71 OKGIIK_11895 thiS thiazole synthase low > 52

Not shown: 6 genomes with orthologs for HSERO_RS07150 only; 8 genomes with orthologs for HSERO_RS02130 only