Conservation of cofitness between HER17_RS02805 and HER17_RS19510 in Pectobacterium carotovorum WPP14

84 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS02805 threonine synthase 1.0 HER17_RS19510 aspartate carbamoyltransferase 0.93 20
Dickeya dadantii 3937 0.88 DDA3937_RS18405 threonine synthase 0.92 DDA3937_RS01925 aspartate carbamoyltransferase 0.70 56
Dickeya dianthicola ME23 0.87 DZA65_RS19475 threonine synthase 0.91 DZA65_RS01970 aspartate carbamoyltransferase 0.57 48
Dickeya dianthicola 67-19 0.87 HGI48_RS18335 threonine synthase 0.91 HGI48_RS01900 aspartate carbamoyltransferase 0.68 21
Rahnella sp. WP5 0.86 EX31_RS03935 threonine synthase 0.88 EX31_RS12785 aspartate carbamoyltransferase 0.92 58
Serratia liquefaciens MT49 0.86 IAI46_03040 threonine synthase 0.89 IAI46_02275 aspartate carbamoyltransferase 0.84 14
Pantoea sp. MT58 0.83 IAI47_16205 threonine synthase 0.86 IAI47_16860 aspartate carbamoyltransferase 0.77 70
Erwinia tracheiphila SCR3 0.82 LU632_RS02620 thrC threonine synthase 0.85 LU632_RS20950 pyrB aspartate carbamoyltransferase — —
Enterobacter asburiae PDN3 0.82 EX28DRAFT_3616 threonine synthase 0.88 EX28DRAFT_3446 aspartate carbamoyltransferase (EC 2.1.3.2) — —
Enterobacter sp. TBS_079 0.82 MPMX20_00712 Threonine synthase 0.88 MPMX20_00544 Aspartate carbamoyltransferase catalytic subunit 0.85 51
Klebsiella michiganensis M5al 0.81 BWI76_RS04255 threonine synthase 0.88 BWI76_RS02995 aspartate carbamoyltransferase 0.50 92
Escherichia coli ECRC62 0.79 BNILDI_08170 thrC threonine synthase 0.88 BNILDI_07385 pyrB aspartate carbamoyltransferase low > 75
Escherichia coli ECRC100 0.79 OKFHMN_11100 thrC threonine synthase 0.88 OKFHMN_11865 pyrB aspartate carbamoyltransferase low > 80
Escherichia fergusonii Becca 0.79 EFB2_04039 Threonine synthase 0.88 EFB2_04288 Aspartate carbamoyltransferase catalytic subunit low > 86
Escherichia coli BL21 0.79 ECD_00004 L-threonine synthase 0.88 ECD_04113 aspartate carbamoyltransferase, catalytic subunit low > 61
Escherichia coli ECOR27 0.79 NOLOHH_03430 thrC threonine synthase 0.88 NOLOHH_04125 pyrB aspartate carbamoyltransferase low > 75
Escherichia coli ECRC102 0.79 NIAGMN_08950 thrC threonine synthase 0.88 NIAGMN_09715 pyrB aspartate carbamoyltransferase — —
Escherichia coli ECRC101 0.79 MCAODC_01615 thrC threonine synthase 0.88 MCAODC_02370 pyrB aspartate carbamoyltransferase 0.68 79
Escherichia coli ECOR38 0.79 HEPCGN_09105 thrC threonine synthase 0.88 HEPCGN_10060 pyrB aspartate carbamoyltransferase 0.77 85
Escherichia coli ECRC98 0.79 JDDGAC_14695 thrC threonine synthase 0.88 JDDGAC_15505 pyrB aspartate carbamoyltransferase low > 86
Escherichia coli ECRC99 0.79 KEDOAH_17055 thrC threonine synthase 0.88 KEDOAH_16290 pyrB aspartate carbamoyltransferase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.79 OHPLBJKB_03656 Threonine synthase 0.88 OHPLBJKB_03789 Aspartate carbamoyltransferase catalytic subunit low > 73
Escherichia coli BW25113 0.79 b0004 thrC threonine synthase (NCBI) 0.88 b4245 pyrB aspartate carbamoyltransferase catalytic subunit (NCBI) low > 76
Escherichia coli Nissle 1917 0.79 ECOLIN_RS00020 threonine synthase 0.88 ECOLIN_RS24625 aspartate carbamoyltransferase 0.34 52
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.79 GFF1080 Threonine synthase (EC 4.2.3.1) 0.87 GFF930 Aspartate carbamoyltransferase (EC 2.1.3.2) low > 78
Vibrio cholerae E7946 ATCC 55056 0.69 CSW01_11965 threonine synthase 0.73 CSW01_12725 aspartate carbamoyltransferase low > 62
Alteromonas macleodii MIT1002 0.62 MIT1002_03084 Threonine synthase 0.31 MIT1002_00423 Aspartate carbamoyltransferase catalytic chain 0.97 9
Shewanella loihica PV-4 0.58 Shew_1081 threonine synthase (RefSeq) 0.31 Shew_1013 aspartate carbamoyltransferase (RefSeq) low > 60
Shewanella sp. ANA-3 0.55 Shewana3_1141 threonine synthase (RefSeq) 0.33 Shewana3_3070 aspartate carbamoyltransferase (RefSeq) 0.86 70
Shewanella oneidensis MR-1 0.55 SO3413 thrC threonine synthase (NCBI ptt file) 0.33 SO1301 pyrB aspartate carbamoyltransferase (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.55 Sama_0907 threonine synthase (RefSeq) 0.31 Sama_0840 aspartate carbamoyltransferase (RefSeq) low > 62
Bacteroides thetaiotaomicron VPI-5482 0.42 BT2401 threonine synthase (NCBI ptt file) 0.50 BT0742 aspartate carbamoyltransferase catalytic chain (NCBI ptt file) — —
Bacteroides ovatus ATCC 8483 0.41 BACOVA_03023 threonine synthase 0.49 BACOVA_02450 aspartate carbamoyltransferase — —
Phocaeicola vulgatus CL09T03C04 0.41 HMPREF1058_RS14730 threonine synthase 0.49 HMPREF1058_RS03820 aspartate carbamoyltransferase — —
Phocaeicola dorei CL03T12C01 0.41 ABI39_RS10440 threonine synthase 0.49 ABI39_RS17400 aspartate carbamoyltransferase — —
Bacteroides stercoris CC31F 0.41 HMPREF1181_RS00050 threonine synthase 0.49 HMPREF1181_RS14990 aspartate carbamoyltransferase 0.91 30
Echinicola vietnamensis KMM 6221, DSM 17526 0.39 Echvi_2002 threonine synthase 0.22 Echvi_4661 aspartate carbamoyltransferase — —
Parabacteroides merdae CL09T00C40 0.39 HMPREF1078_RS10395 threonine synthase 0.49 HMPREF1078_RS01350 aspartate carbamoyltransferase — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.37 ABZR88_RS18960 threonine synthase 0.24 ABZR88_RS03460 aspartate carbamoyltransferase catalytic subunit — —
Pedobacter sp. GW460-11-11-14-LB5 0.37 CA265_RS23465 threonine synthase 0.23 CA265_RS14660 aspartate carbamoyltransferase — —
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.2954.1 Threonine synthase (EC 4.2.3.1) 0.21 Xcc-8004.1722.1 Aspartate carbamoyltransferase (EC 2.1.3.2) — —
Phaeobacter inhibens DSM 17395 0.29 PGA1_c06310 threonine synthase ThrC 0.22 PGA1_c03060 aspartate carbamoyltransferase PyrB — —
Lysobacter sp. OAE881 0.29 ABIE51_RS17530 threonine synthase 0.22 ABIE51_RS16015 aspartate carbamoyltransferase catalytic subunit low > 62
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_06370 threonine synthase 0.22 AO356_13450 aspartate carbamoyltransferase catalytic subunit — —
Pseudomonas putida KT2440 0.28 PP_1471 Threonine synthase 0.21 PP_4998 Aspartate carbamoyltransferase — —
Pseudomonas fluorescens FW300-N2E3 0.28 AO353_04350 threonine synthase 0.22 AO353_08135 aspartate carbamoyltransferase catalytic subunit — —
Pseudomonas fluorescens FW300-N2E2 0.28 Pf6N2E2_3142 Threonine synthase (EC 4.2.3.1) 0.22 Pf6N2E2_4606 Aspartate carbamoyltransferase (EC 2.1.3.2) — —
Rhodanobacter denitrificans MT42 0.28 LRK55_RS09995 threonine synthase 0.23 LRK55_RS03990 aspartate carbamoyltransferase catalytic subunit — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.28 Psyr_1291 L-threonine synthase 0.21 Psyr_0482 aspartate carbamoyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.28 Psyr_1291 L-threonine synthase 0.21 Psyr_0482 aspartate carbamoyltransferase — —
Rhodanobacter denitrificans FW104-10B01 0.28 LRK54_RS10355 threonine synthase 0.23 LRK54_RS04220 aspartate carbamoyltransferase catalytic subunit — —
Pseudomonas fluorescens GW456-L13 0.28 PfGW456L13_1724 Threonine synthase (EC 4.2.3.1) 0.22 PfGW456L13_1016 Aspartate carbamoyltransferase (EC 2.1.3.2) — —
Pseudomonas fluorescens FW300-N1B4 0.28 Pf1N1B4_3014 Threonine synthase (EC 4.2.3.1) 0.22 Pf1N1B4_2347 Aspartate carbamoyltransferase (EC 2.1.3.2) — —
Pseudomonas sp. S08-1 0.28 OH686_17765 threonine synthase 0.21 OH686_10940 aspartate carbamoyltransferase — —
Pseudomonas simiae WCS417 0.28 PS417_22880 threonine synthase 0.22 PS417_26700 aspartate carbamoyltransferase catalytic subunit — —
Pseudomonas fluorescens SBW25-INTG 0.27 PFLU_RS24545 threonine synthase 0.21 PFLU_RS28345 aspartate carbamoyltransferase — —
Pseudomonas sp. RS175 0.27 PFR28_00334 Threonine synthase 0.22 PFR28_04237 Aspartate carbamoyltransferase — —
Pseudomonas fluorescens SBW25 0.27 PFLU_RS24545 threonine synthase 0.21 PFLU_RS28345 aspartate carbamoyltransferase — —
Rhodanobacter sp. FW510-T8 0.27 OKGIIK_13570 thrC threonine synthase 0.22 OKGIIK_11095 pyrB aspartate carbamoyltransferase catalytic subunit — —
Dyella japonica UNC79MFTsu3.2 0.27 ABZR86_RS15975 threonine synthase (EC 4.2.3.1) (from data) 0.21 ABZR86_RS10390 aspartate carbamoyltransferase catalytic subunit — —
Caulobacter crescentus NA1000 Δfur 0.27 CCNA_03510 threonine synthase 0.20 CCNA_02525 aspartate carbamoyltransferase — —
Caulobacter crescentus NA1000 0.27 CCNA_03510 threonine synthase 0.20 CCNA_02525 aspartate carbamoyltransferase — —
Pseudomonas stutzeri RCH2 0.27 Psest_3125 threonine synthase 0.22 Psest_0291 aspartate carbamoyltransferase — —
Bosea sp. OAE506 0.27 ABIE41_RS22985 threonine synthase 0.21 ABIE41_RS17230 aspartate carbamoyltransferase catalytic subunit — —
Sinorhizobium meliloti 1021 0.27 SMc00077 threonine synthase 0.22 SMc01360 aspartate carbamoyltransferase catalytic subunit — —
Dinoroseobacter shibae DFL-12 0.26 Dshi_1146 threonine synthase (RefSeq) 0.21 Dshi_3091 aspartate carbamoyltransferase (RefSeq) — —
Rhodospirillum rubrum S1H 0.26 Rru_A3233 Threonine synthase (NCBI) 0.20 Rru_A3190 Aspartate carbamoyltransferase (NCBI) — —
Agrobacterium fabrum C58 0.26 Atu0787 threonine synthase 0.20 Atu1308 aspartate carbamoyl transferase catalytic subunit — —
Azospirillum sp. SherDot2 0.26 MPMX19_00671 Threonine synthase 0.21 MPMX19_01054 Aspartate carbamoyltransferase — —
Rhizobium sp. OAE497 0.26 ABIE40_RS04230 threonine synthase 0.20 ABIE40_RS07385 aspartate carbamoyltransferase catalytic subunit — —
Azospirillum brasilense Sp245 0.26 AZOBR_RS10545 threonine synthase 0.21 AZOBR_RS20575 aspartate carbamoyltransferase — —
Marinobacter adhaerens HP15 0.25 HP15_765 threonine synthase 0.23 HP15_3507 aspartate carbamoyltransferase — —
Rhodopseudomonas palustris CGA009 0.25 TX73_004325 threonine synthase 0.20 TX73_016120 aspartate carbamoyltransferase catalytic subunit — —
Magnetospirillum magneticum AMB-1 0.24 AMB_RS17140 threonine synthase 0.21 AMB_RS18300 aspartate carbamoyltransferase — —
Dechlorosoma suillum PS 0.23 Dsui_2904 threonine synthase 0.21 Dsui_0596 aspartate carbamoyltransferase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.22 GFF3936 Threonine synthase (EC 4.2.3.1) 0.20 GFF651 Aspartate carbamoyltransferase (EC 2.1.3.2) — —
Ralstonia sp. UNC404CL21Col 0.22 ABZR87_RS05865 threonine synthase 0.20 ABZR87_RS08625 aspartate carbamoyltransferase catalytic subunit low > 80
Herbaspirillum seropedicae SmR1 0.21 HSERO_RS10470 threonine synthase 0.20 HSERO_RS02330 aspartate carbamoyltransferase — —
Acidovorax sp. GW101-3H11 0.21 Ac3H11_1505 Threonine synthase (EC 4.2.3.1) 0.20 Ac3H11_3978 Aspartate carbamoyltransferase (EC 2.1.3.2) — —
Bifidobacterium breve UCC2003 0.21 BBR_RS14070 threonine synthase 0.41 BBR_RS15425 aspartate carbamoyltransferase low > 34
Cupriavidus basilensis FW507-4G11 0.21 RR42_RS12535 threonine synthase 0.20 RR42_RS15860 aspartate carbamoyltransferase catalytic subunit — —
Ralstonia solanacearum GMI1000 0.20 RS_RS06660 threonine synthase 0.20 RS_RS03410 aspartate carbamoyltransferase — —
Ralstonia solanacearum IBSBF1503 0.20 RALBFv3_RS15880 threonine synthase 0.20 RALBFv3_RS12625 aspartate carbamoyltransferase catalytic subunit — —
Ralstonia solanacearum UW163 0.20 UW163_RS13325 threonine synthase 0.20 UW163_RS00940 aspartate carbamoyltransferase catalytic subunit — —
Ralstonia solanacearum PSI07 0.19 RPSI07_RS17485 threonine synthase 0.20 RPSI07_RS20635 aspartate carbamoyltransferase catalytic subunit — —

Not shown: 9 genomes with orthologs for HER17_RS02805 only; 10 genomes with orthologs for HER17_RS19510 only