Conservation of cofitness between HER17_RS14920 and HER17_RS11780 in Pectobacterium carotovorum WPP14

85 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS14920 ADP-forming succinate--CoA ligase subunit beta 1.0 HER17_RS11780 glucose-6-phosphate dehydrogenase 0.58 9
Dickeya dadantii 3937 0.93 DDA3937_RS06470 ADP-forming succinate--CoA ligase subunit beta 0.92 DDA3937_RS10135 glucose-6-phosphate dehydrogenase
Dickeya dianthicola 67-19 0.92 HGI48_RS06510 ADP-forming succinate--CoA ligase subunit beta 0.92 HGI48_RS10165 glucose-6-phosphate dehydrogenase 0.75 5
Dickeya dianthicola ME23 0.92 DZA65_RS06855 ADP-forming succinate--CoA ligase subunit beta 0.92 DZA65_RS10580 glucose-6-phosphate dehydrogenase 0.76 29
Serratia liquefaciens MT49 0.91 IAI46_06285 ADP-forming succinate--CoA ligase subunit beta 0.91 IAI46_14575 glucose-6-phosphate dehydrogenase
Pantoea sp. MT58 0.91 IAI47_13735 ADP-forming succinate--CoA ligase subunit beta 0.87 IAI47_08495 glucose-6-phosphate dehydrogenase
Erwinia tracheiphila SCR3 0.90 LU632_RS16085 sucC ADP-forming succinate--CoA ligase subunit beta 0.87 LU632_RS13360 zwf glucose-6-phosphate dehydrogenase
Klebsiella michiganensis M5al 0.90 BWI76_RS08425 succinyl-CoA ligase subunit beta 0.87 BWI76_RS18105 glucose-6-phosphate dehydrogenase
Escherichia coli Nissle 1917 0.90 ECOLIN_RS03880 ADP-forming succinate--CoA ligase subunit beta 0.88 ECOLIN_RS10315 glucose-6-phosphate dehydrogenase
Escherichia coli ECRC98 0.90 JDDGAC_10570 sucC ADP-forming succinate--CoA ligase subunit beta 0.88 JDDGAC_00910 zwf glucose-6-phosphate dehydrogenase low > 86
Escherichia coli ECRC62 0.90 BNILDI_21300 sucC ADP-forming succinate--CoA ligase subunit beta 0.88 BNILDI_15640 zwf glucose-6-phosphate dehydrogenase low > 75
Escherichia coli BW25113 0.90 b0728 sucC succinyl-CoA synthetase subunit beta (NCBI) 0.88 b1852 zwf glucose-6-phosphate 1-dehydrogenase (NCBI)
Escherichia coli BL21 0.90 ECD_00687 succinyl-CoA synthetase, beta subunit 0.88 ECD_01823 glucose-6-phosphate 1-dehydrogenase
Escherichia coli HS(pFamp)R (ATCC 700891) 0.90 OHPLBJKB_02989 Succinate--CoA ligase [ADP-forming] subunit beta 0.88 OHPLBJKB_01877 Glucose-6-phosphate 1-dehydrogenase low > 73
Escherichia coli ECRC102 0.90 NIAGMN_04965 sucC ADP-forming succinate--CoA ligase subunit beta 0.88 NIAGMN_01725 zwf glucose-6-phosphate dehydrogenase
Escherichia fergusonii Becca 0.90 EFB2_03378 Succinate--CoA ligase [ADP-forming] subunit beta 0.88 EFB2_02091 Glucose-6-phosphate 1-dehydrogenase low > 86
Escherichia coli ECRC99 0.90 KEDOAH_21050 sucC ADP-forming succinate--CoA ligase subunit beta 0.88 KEDOAH_01770 zwf glucose-6-phosphate dehydrogenase
Escherichia coli ECRC100 0.90 OKFHMN_06915 sucC ADP-forming succinate--CoA ligase subunit beta 0.88 OKFHMN_26335 zwf glucose-6-phosphate dehydrogenase low > 80
Escherichia coli ECOR38 0.90 HEPCGN_01315 sucC ADP-forming succinate--CoA ligase subunit beta 0.88 HEPCGN_04740 zwf glucose-6-phosphate dehydrogenase low > 87
Escherichia coli ECOR27 0.90 NOLOHH_23305 sucC ADP-forming succinate--CoA ligase subunit beta 0.88 NOLOHH_16845 zwf glucose-6-phosphate dehydrogenase low > 75
Escherichia coli ECRC101 0.90 MCAODC_26135 sucC ADP-forming succinate--CoA ligase subunit beta 0.88 MCAODC_19070 zwf glucose-6-phosphate dehydrogenase low > 87
Rahnella sp. WP5 0.89 EX31_RS23450 ADP-forming succinate--CoA ligase subunit beta 0.88 EX31_RS10630 glucose-6-phosphate dehydrogenase
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.89 GFF4641 Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) 0.88 GFF1631 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) low > 78
Enterobacter sp. TBS_079 0.88 MPMX20_01356 Succinate--CoA ligase [ADP-forming] subunit beta 0.88 MPMX20_02757 Glucose-6-phosphate 1-dehydrogenase low > 85
Enterobacter asburiae PDN3 0.88 EX28DRAFT_2264 succinyl-CoA synthetase, beta subunit 0.88 EX28DRAFT_0704 glucose-6-phosphate 1-dehydrogenase
Pseudomonas sp. S08-1 0.78 OH686_01955 Succinyl-CoA ligase [ADP-forming] beta chain 0.53 OH686_02435 glucose-6-phosphate dehydrogenase
Pseudomonas fluorescens SBW25 0.77 PFLU_RS08970 ADP-forming succinate--CoA ligase subunit beta 0.54 PFLU_RS23725 glucose-6-phosphate dehydrogenase
Pseudomonas fluorescens SBW25-INTG 0.77 PFLU_RS08970 ADP-forming succinate--CoA ligase subunit beta 0.54 PFLU_RS23725 glucose-6-phosphate dehydrogenase
Pseudomonas fluorescens GW456-L13 0.77 PfGW456L13_4266 Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) 0.53 PfGW456L13_1901 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
Pseudomonas fluorescens FW300-N2E3 0.77 AO353_01820 succinyl-CoA synthetase subunit beta 0.53 AO353_03360 glucose-6-phosphate dehydrogenase
Pseudomonas fluorescens FW300-N2E2 0.77 Pf6N2E2_5858 Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) 0.52 Pf6N2E2_2885 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
Shewanella amazonensis SB2B 0.77 Sama_1429 sucC succinyl-CoA synthetase subunit beta (RefSeq) 0.67 Sama_1812 glucose-6-phosphate 1-dehydrogenase (RefSeq)
Pseudomonas simiae WCS417 0.77 PS417_08910 succinyl-CoA synthetase subunit beta 0.53 PS417_22110 glucose-6-phosphate dehydrogenase
Pseudomonas sp. RS175 0.77 PFR28_03093 Succinate--CoA ligase [ADP-forming] subunit beta 0.51 PFR28_00573 Glucose-6-phosphate 1-dehydrogenase
Pseudomonas fluorescens FW300-N2C3 0.77 AO356_19710 succinyl-CoA synthetase subunit beta 0.52 AO356_05160 glucose-6-phosphate dehydrogenase
Pseudomonas fluorescens FW300-N1B4 0.77 Pf1N1B4_3684 Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) 0.53 Pf1N1B4_589 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
Vibrio cholerae E7946 ATCC 55056 0.77 CSW01_10420 succinyl-CoA ligase subunit beta 0.37 CSW01_18625 glucose-6-phosphate dehydrogenase low > 62
Marinobacter adhaerens HP15 0.76 HP15_1524 succinyl-CoA synthetase, beta subunit 0.54 HP15_2179 glucose-6-phosphate 1-dehydrogenase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.76 Psyr_2012 succinyl-CoA synthetase (ADP-forming) beta subunit 0.52 Psyr_1120 glucose-6-phosphate 1-dehydrogenase
Pseudomonas syringae pv. syringae B728a 0.76 Psyr_2012 succinyl-CoA synthetase (ADP-forming) beta subunit 0.52 Psyr_1120 glucose-6-phosphate 1-dehydrogenase
Shewanella sp. ANA-3 0.76 Shewana3_1712 sucC succinyl-CoA synthetase subunit beta (RefSeq) 0.67 Shewana3_2151 glucose-6-phosphate 1-dehydrogenase (RefSeq)
Alteromonas macleodii MIT1002 0.75 MIT1002_01950 Succinyl-CoA ligase [ADP-forming] subunit beta 0.62 MIT1002_02407 Glucose-6-phosphate 1-dehydrogenase
Shewanella oneidensis MR-1 0.75 SO1932 sucC succinyl-CoA synthase, beta subunit (NCBI ptt file) 0.67 SO2489 zwf glucose-6-phosphate 1-dehydrogenase (NCBI ptt file)
Shewanella loihica PV-4 0.75 Shew_1657 sucC succinyl-CoA synthetase subunit beta (RefSeq) 0.67 Shew_2048 glucose-6-phosphate 1-dehydrogenase (RefSeq)
Pseudomonas putida KT2440 0.74 PP_4186 succinyl-CoA synthetase, beta subunit glutaryl-CoA synthetase, beta subunit 0.51 PP_1022 glucose 6-phosphate-1-dehydrogenase
Pseudomonas stutzeri RCH2 0.74 Psest_2491 succinyl-CoA synthetase, beta subunit 0.52 Psest_1996 glucose-6-phosphate 1-dehydrogenase low > 67
Lysobacter sp. OAE881 0.59 ABIE51_RS04860 ADP-forming succinate--CoA ligase subunit beta 0.46 ABIE51_RS01620 glucose-6-phosphate dehydrogenase
Dyella japonica UNC79MFTsu3.2 0.58 ABZR86_RS11025 ADP-forming succinate--CoA ligase subunit beta 0.48 ABZR86_RS14700 glucose-6-phosphate dehydrogenase
Rhodanobacter sp. FW510-T8 0.58 OKGIIK_01760 sucC ADP-forming succinate--CoA ligase subunit beta 0.47 OKGIIK_14360 zwf glucose-6-phosphate dehydrogenase
Xanthomonas campestris pv. campestris strain 8004 0.57 Xcc-8004.1355.1 Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) 0.33 Xcc-8004.5069.1 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
Rhodanobacter denitrificans FW104-10B01 0.57 LRK54_RS04985 ADP-forming succinate--CoA ligase subunit beta 0.47 LRK54_RS07870 glucose-6-phosphate dehydrogenase
Rhodanobacter denitrificans MT42 0.57 LRK55_RS04765 ADP-forming succinate--CoA ligase subunit beta 0.47 LRK55_RS07600 glucose-6-phosphate dehydrogenase
Dinoroseobacter shibae DFL-12 0.56 Dshi_2878 succinyl-CoA synthetase, beta subunit (RefSeq) 0.41 Dshi_1684 glucose-6-phosphate 1-dehydrogenase (RefSeq)
Azospirillum sp. SherDot2 0.55 MPMX19_00106 Succinate--CoA ligase [ADP-forming] subunit beta 0.46 MPMX19_05119 Glucose-6-phosphate 1-dehydrogenase
Paraburkholderia sabiae LMG 24235 0.54 QEN71_RS20405 ADP-forming succinate--CoA ligase subunit beta 0.44 QEN71_RS03330 glucose-6-phosphate dehydrogenase low > 153
Caulobacter crescentus NA1000 Δfur 0.54 CCNA_00340 succinyl-CoA synthetase beta chain 0.43 CCNA_02136 glucose-6-phosphate 1-dehydrogenase
Cupriavidus basilensis FW507-4G11 0.54 RR42_RS31375 succinyl-CoA synthetase subunit beta 0.44 RR42_RS37405 glucose-6-phosphate dehydrogenase low > 128
Caulobacter crescentus NA1000 0.54 CCNA_00340 succinyl-CoA synthetase beta chain 0.43 CCNA_02136 glucose-6-phosphate 1-dehydrogenase
Phaeobacter inhibens DSM 17395 0.53 PGA1_c03630 succinyl-CoA ligase [ADP-forming] subunit beta 0.39 PGA1_c27990 glucose-6-phosphate 1-dehydrogenase
Rhodopseudomonas palustris CGA009 0.53 TX73_000990 ADP-forming succinate--CoA ligase subunit beta 0.34 TX73_018845 glucose-6-phosphate dehydrogenase
Sphingomonas koreensis DSMZ 15582 0.52 Ga0059261_2278 succinyl-CoA synthetase, beta subunit 0.43 Ga0059261_0352 glucose-6-phosphate 1-dehydrogenase
Bosea sp. OAE506 0.52 ABIE41_RS08965 ADP-forming succinate--CoA ligase subunit beta 0.43 ABIE41_RS23515 glucose-6-phosphate dehydrogenase
Paraburkholderia bryophila 376MFSha3.1 0.50 H281DRAFT_04205 succinyl-CoA synthetase (ADP-forming) beta subunit 0.44 H281DRAFT_00165 glucose-6-phosphate 1-dehydrogenase
Sinorhizobium meliloti 1021 0.49 SMc02480 succinyl-CoA synthetase subunit beta 0.46 SMc03070 glucose-6-phosphate 1-dehydrogenase
Acidovorax sp. GW101-3H11 0.49 Ac3H11_1252 Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) 0.40 Ac3H11_2076 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
Burkholderia phytofirmans PsJN 0.49 BPHYT_RS16345 succinyl-CoA ligase [ADP-forming] subunit beta 0.43 BPHYT_RS05020 glucose-6-phosphate 1-dehydrogenase low > 109
Paraburkholderia graminis OAS925 0.49 ABIE53_003445 succinyl-CoA synthetase beta subunit 0.41 ABIE53_006464 glucose-6-phosphate 1-dehydrogenase low > 113
Variovorax sp. OAS795 0.49 ABID97_RS24475 ADP-forming succinate--CoA ligase subunit beta 0.41 ABID97_RS07065 glucose-6-phosphate dehydrogenase low > 91
Ralstonia solanacearum GMI1000 0.48 RS_RS02775 succinyl-CoA ligase subunit beta 0.45 RS_RS24615 glucose-6-phosphate dehydrogenase low > 80
Ralstonia solanacearum UW163 0.48 UW163_RS01610 ADP-forming succinate--CoA ligase subunit beta 0.45 UW163_RS17130 glucose-6-phosphate dehydrogenase
Ralstonia solanacearum IBSBF1503 0.48 RALBFv3_RS12025 ADP-forming succinate--CoA ligase subunit beta 0.45 RALBFv3_RS16390 glucose-6-phosphate dehydrogenase low > 76
Hydrogenophaga sp. GW460-11-11-14-LB1 0.48 GFF2504 Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) 0.44 GFF5493 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
Variovorax sp. SCN45 0.48 GFF5405 Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) 0.40 GFF5261 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
Brevundimonas sp. GW460-12-10-14-LB2 0.48 A4249_RS14420 ADP-forming succinate--CoA ligase subunit beta 0.43 A4249_RS10725 glucose-6-phosphate dehydrogenase
Ralstonia sp. UNC404CL21Col 0.48 ABZR87_RS07980 ADP-forming succinate--CoA ligase subunit beta 0.45 ABZR87_RS22915 glucose-6-phosphate dehydrogenase
Ralstonia solanacearum PSI07 0.48 RPSI07_RS21245 ADP-forming succinate--CoA ligase subunit beta 0.45 RPSI07_RS07315 glucose-6-phosphate dehydrogenase low > 81
Rhizobium sp. OAE497 0.48 ABIE40_RS17995 ADP-forming succinate--CoA ligase subunit beta 0.45 ABIE40_RS03200 glucose-6-phosphate dehydrogenase
Herbaspirillum seropedicae SmR1 0.48 HSERO_RS03280 malate--CoA ligase subunit beta 0.45 HSERO_RS05510 glucose-6-phosphate 1-dehydrogenase
Agrobacterium fabrum C58 0.47 Atu2638 succinyl-CoA synthetase beta chain 0.46 Atu0600 glucose-6-phosphate 1-dehydrogenase
Bacteroides thetaiotaomicron VPI-5482 0.44 BT0788 succinyl-CoA synthetase beta chain (NCBI ptt file) 0.37 BT1221 glucose-6-phosphate 1-dehydrogenase (NCBI ptt file) low > 81
Bacteroides ovatus ATCC 8483 0.44 BACOVA_02527 succinate-CoA ligase, beta subunit 0.37 BACOVA_00508 glucose-6-phosphate dehydrogenase low > 94
Echinicola vietnamensis KMM 6221, DSM 17526 0.44 Echvi_2908 succinyl-CoA synthetase, beta subunit 0.38 Echvi_2862 glucose-6-phosphate 1-dehydrogenase low > 79
Pedobacter sp. GW460-11-11-14-LB5 0.43 CA265_RS04300 succinate--CoA ligase subunit beta 0.37 CA265_RS09810 glucose-6-phosphate dehydrogenase
Mucilaginibacter yixingensis YX-36 DSM 26809 0.43 ABZR88_RS07630 ADP-forming succinate--CoA ligase subunit beta 0.38 ABZR88_RS02975 glucose-6-phosphate dehydrogenase
Mycobacterium tuberculosis H37Rv 0.34 Rv0951 Probable succinyl-CoA synthetase (beta chain) SucC (SCS-beta) 0.37 Rv1447c Probable glucose-6-phosphate 1-dehydrogenase Zwf2 (G6PD)
Bifidobacterium breve UCC2003 0.29 BBR_RS15675 ADP-forming succinate--CoA ligase subunit beta 0.38 BBR_RS11480 glucose-6-phosphate dehydrogenase

Not shown: 10 genomes with orthologs for HER17_RS14920 only; 5 genomes with orthologs for HER17_RS11780 only