Conservation of cofitness between HER17_RS14920 and HER17_RS07180 in Pectobacterium carotovorum WPP14

87 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS14920 ADP-forming succinate--CoA ligase subunit beta 1.0 HER17_RS07180 NADH-quinone oxidoreductase subunit M 0.67 2
Dickeya dadantii 3937 0.93 DDA3937_RS06470 ADP-forming succinate--CoA ligase subunit beta 0.88 DDA3937_RS14280 NADH-quinone oxidoreductase subunit M
Dickeya dianthicola ME23 0.92 DZA65_RS06855 ADP-forming succinate--CoA ligase subunit beta 0.88 DZA65_RS14930 NADH-quinone oxidoreductase subunit M
Dickeya dianthicola 67-19 0.92 HGI48_RS06510 ADP-forming succinate--CoA ligase subunit beta 0.88 HGI48_RS14255 NADH-quinone oxidoreductase subunit M low > 71
Serratia liquefaciens MT49 0.91 IAI46_06285 ADP-forming succinate--CoA ligase subunit beta 0.89 IAI46_17655 NADH-quinone oxidoreductase subunit M low > 86
Pantoea sp. MT58 0.91 IAI47_13735 ADP-forming succinate--CoA ligase subunit beta 0.84 IAI47_06415 NADH-quinone oxidoreductase subunit M
Erwinia tracheiphila SCR3 0.90 LU632_RS16085 sucC ADP-forming succinate--CoA ligase subunit beta 0.85 LU632_RS08020 nuoM NADH-quinone oxidoreductase subunit M
Klebsiella michiganensis M5al 0.90 BWI76_RS08425 succinyl-CoA ligase subunit beta 0.86 BWI76_RS20135 NADH-quinone oxidoreductase subunit M 0.51 24
Escherichia coli ECRC98 0.90 JDDGAC_10570 sucC ADP-forming succinate--CoA ligase subunit beta 0.86 JDDGAC_26860 nuoM NADH-quinone oxidoreductase subunit M low > 86
Escherichia coli ECRC62 0.90 BNILDI_21300 sucC ADP-forming succinate--CoA ligase subunit beta 0.86 BNILDI_13435 nuoM NADH-quinone oxidoreductase subunit M 0.72 24
Escherichia coli BW25113 0.90 b0728 sucC succinyl-CoA synthetase subunit beta (NCBI) 0.86 b2277 nuoM NADH dehydrogenase subunit M (NCBI) 0.39 16
Escherichia fergusonii Becca 0.90 EFB2_03378 Succinate--CoA ligase [ADP-forming] subunit beta 0.86 EFB2_01582 NADH-quinone oxidoreductase subunit M low > 86
Escherichia coli ECRC101 0.90 MCAODC_26135 sucC ADP-forming succinate--CoA ligase subunit beta 0.86 MCAODC_13935 nuoM NADH-quinone oxidoreductase subunit M 0.61 55
Escherichia coli BL21 0.90 ECD_00687 succinyl-CoA synthetase, beta subunit 0.86 ECD_02202 NADH:ubiquinone oxidoreductase, membrane subunit M 0.46 32
Escherichia coli HS(pFamp)R (ATCC 700891) 0.90 OHPLBJKB_02989 Succinate--CoA ligase [ADP-forming] subunit beta 0.86 OHPLBJKB_01429 NADH-quinone oxidoreductase subunit M 0.39 32
Escherichia coli ECRC100 0.90 OKFHMN_06915 sucC ADP-forming succinate--CoA ligase subunit beta 0.86 OKFHMN_22895 nuoM NADH-quinone oxidoreductase subunit M low > 80
Escherichia coli ECOR38 0.90 HEPCGN_01315 sucC ADP-forming succinate--CoA ligase subunit beta 0.86 HEPCGN_22100 nuoM NADH-quinone oxidoreductase subunit M low > 87
Escherichia coli ECOR27 0.90 NOLOHH_23305 sucC ADP-forming succinate--CoA ligase subunit beta 0.86 NOLOHH_14515 nuoM NADH-quinone oxidoreductase subunit M 0.81 6
Escherichia coli ECRC102 0.90 NIAGMN_04965 sucC ADP-forming succinate--CoA ligase subunit beta 0.86 NIAGMN_20665 nuoM NADH-quinone oxidoreductase subunit M
Escherichia coli ECRC99 0.90 KEDOAH_21050 sucC ADP-forming succinate--CoA ligase subunit beta 0.86 KEDOAH_05300 nuoM NADH-quinone oxidoreductase subunit M
Escherichia coli Nissle 1917 0.90 ECOLIN_RS03880 ADP-forming succinate--CoA ligase subunit beta 0.86 ECOLIN_RS13230 NADH-quinone oxidoreductase subunit M
Rahnella sp. WP5 0.89 EX31_RS23450 ADP-forming succinate--CoA ligase subunit beta 0.89 EX31_RS19380 NADH-quinone oxidoreductase subunit M 0.52 24
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.89 GFF4641 Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) 0.86 GFF1880 NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) 0.52 62
Enterobacter sp. TBS_079 0.88 MPMX20_01356 Succinate--CoA ligase [ADP-forming] subunit beta 0.86 MPMX20_03207 NADH-quinone oxidoreductase subunit M 0.69 16
Enterobacter asburiae PDN3 0.88 EX28DRAFT_2264 succinyl-CoA synthetase, beta subunit 0.86 EX28DRAFT_0333 proton-translocating NADH-quinone oxidoreductase, chain M 0.59 54
Pseudomonas sp. S08-1 0.78 OH686_01955 Succinyl-CoA ligase [ADP-forming] beta chain 0.71 OH686_00100 NADH-ubiquinone oxidoreductase chain M
Pseudomonas fluorescens SBW25 0.77 PFLU_RS08970 ADP-forming succinate--CoA ligase subunit beta 0.68 PFLU_RS18670 NADH-quinone oxidoreductase subunit M
Pseudomonas fluorescens SBW25-INTG 0.77 PFLU_RS08970 ADP-forming succinate--CoA ligase subunit beta 0.68 PFLU_RS18670 NADH-quinone oxidoreductase subunit M
Pseudomonas fluorescens FW300-N2E3 0.77 AO353_01820 succinyl-CoA synthetase subunit beta 0.69 AO353_27795 NADH:ubiquinone oxidoreductase subunit M
Pseudomonas fluorescens GW456-L13 0.77 PfGW456L13_4266 Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) 0.68 PfGW456L13_2622 NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
Pseudomonas sp. RS175 0.77 PFR28_03093 Succinate--CoA ligase [ADP-forming] subunit beta 0.67 PFR28_02638 NADH-quinone oxidoreductase subunit M
Pseudomonas fluorescens FW300-N1B4 0.77 Pf1N1B4_3684 Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) 0.66 Pf1N1B4_4029 NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) low > 87
Pseudomonas fluorescens FW300-N2C3 0.77 AO356_19710 succinyl-CoA synthetase subunit beta 0.68 AO356_22015 NADH:ubiquinone oxidoreductase subunit M
Pseudomonas fluorescens FW300-N2E2 0.77 Pf6N2E2_5858 Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) 0.67 Pf6N2E2_266 NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
Pseudomonas simiae WCS417 0.77 PS417_08910 succinyl-CoA synthetase subunit beta 0.67 PS417_16630 NADH:ubiquinone oxidoreductase subunit M
Pseudomonas syringae pv. syringae B728a ΔmexB 0.76 Psyr_2012 succinyl-CoA synthetase (ADP-forming) beta subunit 0.66 Psyr_3208 NADH dehydrogenase subunit M
Pseudomonas syringae pv. syringae B728a 0.76 Psyr_2012 succinyl-CoA synthetase (ADP-forming) beta subunit 0.66 Psyr_3208 NADH dehydrogenase subunit M
Shewanella oneidensis MR-1 0.75 SO1932 sucC succinyl-CoA synthase, beta subunit (NCBI ptt file) 0.70 SO1010 nuoM NADH dehydrogenase I, M subunit (NCBI ptt file)
Pseudomonas putida KT2440 0.74 PP_4186 succinyl-CoA synthetase, beta subunit glutaryl-CoA synthetase, beta subunit 0.66 PP_4130 NADH:ubiquinone oxidoreductase, membrane subunit M
Pseudomonas stutzeri RCH2 0.74 Psest_2491 succinyl-CoA synthetase, beta subunit 0.12 Psest_4369 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit low > 67
Kangiella aquimarina DSM 16071 0.73 B158DRAFT_1426 succinyl-CoA synthetase, beta subunit 0.29 B158DRAFT_0115 NADH dehydrogenase subunit M (EC 1.6.5.3)
Acinetobacter radioresistens SK82 0.63 MPMX26_00754 Succinate--CoA ligase [ADP-forming] subunit beta 0.59 MPMX26_02544 NADH-quinone oxidoreductase subunit M
Lysobacter sp. OAE881 0.59 ABIE51_RS04860 ADP-forming succinate--CoA ligase subunit beta 0.29 ABIE51_RS08370 NADH-quinone oxidoreductase subunit M
Dyella japonica UNC79MFTsu3.2 0.58 ABZR86_RS11025 ADP-forming succinate--CoA ligase subunit beta 0.29 ABZR86_RS06055 NADH-quinone oxidoreductase subunit M
Rhodanobacter sp. FW510-T8 0.58 OKGIIK_01760 sucC ADP-forming succinate--CoA ligase subunit beta 0.29 OKGIIK_05825 nuoM NADH-quinone oxidoreductase subunit M
Xanthomonas campestris pv. campestris strain 8004 0.57 Xcc-8004.1355.1 Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) 0.29 Xcc-8004.1995.1 NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
Rhodanobacter denitrificans FW104-10B01 0.57 LRK54_RS04985 ADP-forming succinate--CoA ligase subunit beta 0.29 LRK54_RS01070 NADH-quinone oxidoreductase subunit M
Rhodanobacter denitrificans MT42 0.57 LRK55_RS04765 ADP-forming succinate--CoA ligase subunit beta 0.29 LRK55_RS00845 NADH-quinone oxidoreductase subunit M
Dinoroseobacter shibae DFL-12 0.56 Dshi_2878 succinyl-CoA synthetase, beta subunit (RefSeq) 0.31 Dshi_1328 proton-translocating NADH-quinone oxidoreductase, chain M (RefSeq)
Azospirillum sp. SherDot2 0.55 MPMX19_00106 Succinate--CoA ligase [ADP-forming] subunit beta 0.32 MPMX19_01734 NADH-quinone oxidoreductase subunit M
Azospirillum brasilense Sp245 0.55 AZOBR_RS14065 malate--CoA ligase subunit beta 0.32 AZOBR_RS07225 NADH:ubiquinone oxidoreductase subunit M
Paraburkholderia sabiae LMG 24235 0.54 QEN71_RS20405 ADP-forming succinate--CoA ligase subunit beta 0.31 QEN71_RS24090 NADH-quinone oxidoreductase subunit M low > 153
Cupriavidus basilensis FW507-4G11 0.54 RR42_RS31375 succinyl-CoA synthetase subunit beta 0.30 RR42_RS05570 NADH:ubiquinone oxidoreductase subunit M
Caulobacter crescentus NA1000 0.54 CCNA_00340 succinyl-CoA synthetase beta chain 0.31 CCNA_02016 NADH-quinone oxidoreductase chain M
Caulobacter crescentus NA1000 Δfur 0.54 CCNA_00340 succinyl-CoA synthetase beta chain 0.31 CCNA_02016 NADH-quinone oxidoreductase chain M
Magnetospirillum magneticum AMB-1 0.54 AMB_RS20030 succinyl-CoA ligase subunit beta 0.29 AMB_RS13950 NADH-quinone oxidoreductase subunit M
Phaeobacter inhibens DSM 17395 0.53 PGA1_c03630 succinyl-CoA ligase [ADP-forming] subunit beta 0.31 PGA1_c10540 NADH-quinone oxidoreductase subunit M
Rhodospirillum rubrum S1H 0.53 Rru_A1211 Succinyl-CoA synthetase, beta subunit (NCBI) 0.31 Rru_A1567 Proton-translocating NADH-quinone oxidoreductase, chain M (NCBI)
Rhodopseudomonas palustris CGA009 0.53 TX73_000990 ADP-forming succinate--CoA ligase subunit beta 0.33 TX73_022035 NADH-quinone oxidoreductase subunit M
Sphingomonas koreensis DSMZ 15582 0.52 Ga0059261_2278 succinyl-CoA synthetase, beta subunit 0.28 Ga0059261_0697 proton-translocating NADH-quinone oxidoreductase, chain M
Bosea sp. OAE506 0.52 ABIE41_RS08965 ADP-forming succinate--CoA ligase subunit beta 0.28 ABIE41_RS17880 NADH-quinone oxidoreductase subunit M
Paraburkholderia bryophila 376MFSha3.1 0.50 H281DRAFT_04205 succinyl-CoA synthetase (ADP-forming) beta subunit 0.30 H281DRAFT_04579 NADH dehydrogenase subunit M
Sinorhizobium meliloti 1021 0.49 SMc02480 succinyl-CoA synthetase subunit beta 0.30 SMc01926 NADH dehydrogenase subunit M
Acidovorax sp. GW101-3H11 0.49 Ac3H11_1252 Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) 0.28 Ac3H11_1440 NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
Burkholderia phytofirmans PsJN 0.49 BPHYT_RS16345 succinyl-CoA ligase [ADP-forming] subunit beta 0.30 BPHYT_RS06685 NADH:ubiquinone oxidoreductase subunit M low > 109
Paraburkholderia graminis OAS925 0.49 ABIE53_003445 succinyl-CoA synthetase beta subunit 0.30 ABIE53_001602 NADH-quinone oxidoreductase subunit M
Variovorax sp. OAS795 0.49 ABID97_RS24475 ADP-forming succinate--CoA ligase subunit beta 0.27 ABID97_RS20435 NADH-quinone oxidoreductase subunit M
Ralstonia solanacearum GMI1000 0.48 RS_RS02775 succinyl-CoA ligase subunit beta 0.31 RS_RS10285 NADH-quinone oxidoreductase subunit M
Ralstonia solanacearum IBSBF1503 0.48 RALBFv3_RS12025 ADP-forming succinate--CoA ligase subunit beta 0.31 RALBFv3_RS02915 NADH-quinone oxidoreductase subunit M
Ralstonia solanacearum UW163 0.48 UW163_RS01610 ADP-forming succinate--CoA ligase subunit beta 0.31 UW163_RS10810 NADH-quinone oxidoreductase subunit M
Variovorax sp. SCN45 0.48 GFF5405 Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) 0.28 GFF4762 NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
Hydrogenophaga sp. GW460-11-11-14-LB1 0.48 GFF2504 Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) 0.29 GFF3693 NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
Brevundimonas sp. GW460-12-10-14-LB2 0.48 A4249_RS14420 ADP-forming succinate--CoA ligase subunit beta 0.32 A4249_RS06345 NADH-quinone oxidoreductase subunit M
Ralstonia solanacearum PSI07 0.48 RPSI07_RS21245 ADP-forming succinate--CoA ligase subunit beta 0.31 RPSI07_RS14395 NADH-quinone oxidoreductase subunit M
Ralstonia sp. UNC404CL21Col 0.48 ABZR87_RS07980 ADP-forming succinate--CoA ligase subunit beta 0.30 ABZR87_RS14820 NADH-quinone oxidoreductase subunit M
Rhizobium sp. OAE497 0.48 ABIE40_RS17995 ADP-forming succinate--CoA ligase subunit beta 0.29 ABIE40_RS07245 NADH-quinone oxidoreductase subunit M
Herbaspirillum seropedicae SmR1 0.48 HSERO_RS03280 malate--CoA ligase subunit beta 0.28 HSERO_RS08880 NADH:ubiquinone oxidoreductase subunit M
Agrobacterium fabrum C58 0.47 Atu2638 succinyl-CoA synthetase beta chain 0.30 Atu1282 NADH dehydrogenase I chain M
Dechlorosoma suillum PS 0.47 Dsui_1445 succinyl-CoA synthetase, beta subunit 0.28 Dsui_3038 proton-translocating NADH-quinone oxidoreductase, chain M
Castellaniella sp019104865 MT123 0.47 ABCV34_RS04435 ADP-forming succinate--CoA ligase subunit beta 0.29 ABCV34_RS08690 NADH-quinone oxidoreductase subunit M
Bacteroides thetaiotaomicron VPI-5482 0.44 BT0788 succinyl-CoA synthetase beta chain (NCBI ptt file) 0.21 BT4059 NADH dehydrogenase I, chain M (NCBI ptt file) low > 81
Pontibacter actiniarum KMM 6156, DSM 19842 0.44 CA264_10470 succinate--CoA ligase subunit beta 0.48 CA264_04215 NADH-quinone oxidoreductase subunit M
Bacteroides ovatus ATCC 8483 0.44 BACOVA_02527 succinate-CoA ligase, beta subunit 0.21 BACOVA_04854 proton-translocating NADH-quinone oxidoreductase, chain M low > 94
Pedobacter sp. GW460-11-11-14-LB5 0.43 CA265_RS04300 succinate--CoA ligase subunit beta 0.27 CA265_RS23595 NADH-quinone oxidoreductase subunit M
Mucilaginibacter yixingensis YX-36 DSM 26809 0.43 ABZR88_RS07630 ADP-forming succinate--CoA ligase subunit beta 0.27 ABZR88_RS17110 NuoM family protein
Mycobacterium tuberculosis H37Rv 0.34 Rv0951 Probable succinyl-CoA synthetase (beta chain) SucC (SCS-beta) 0.24 Rv3157 Probable NADH dehydrogenase I (chain M) NUOK (NADH-ubiquinone oxidoreductase chain M)
Methanococcus maripaludis JJ 0.29 MMJJ_RS08640 ADP-forming succinate--CoA ligase subunit beta 0.08 MMJJ_RS06005 energy conserving hydrogenase EhbF
Methanococcus maripaludis S2 0.29 MMP_RS05710 ADP-forming succinate--CoA ligase subunit beta 0.08 MMP_RS08365 energy conserving hydrogenase EhbF

Not shown: 8 genomes with orthologs for HER17_RS14920 only; 5 genomes with orthologs for HER17_RS07180 only