Conservation of cofitness between Ga0059261_2764 and Ga0059261_3595 in Sphingomonas koreensis DSMZ 15582

87 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sphingomonas koreensis DSMZ 15582 1.0 Ga0059261_2764 Site-specific recombinase XerD 1.0 Ga0059261_3595 Site-specific recombinase XerD 0.50 1
Brevundimonas sp. GW460-12-10-14-LB2 0.48 A4249_RS12210 tyrosine recombinase XerC 0.39 A4249_RS04165 site-specific tyrosine recombinase XerD — —
Caulobacter crescentus NA1000 Δfur 0.47 CCNA_00349 integrase/recombinase, XerC-CodV family 0.37 CCNA_03101 site-specific tyrosine recombinase XerD low > 67
Caulobacter crescentus NA1000 0.47 CCNA_00349 integrase/recombinase, XerC-CodV family 0.37 CCNA_03101 site-specific tyrosine recombinase XerD 0.76 1
Dinoroseobacter shibae DFL-12 0.44 Dshi_5002 xerC hypothetical protein (NCBI) 0.36 Dshi_1611 integrase family protein (RefSeq) — —
Phaeobacter inhibens DSM 17395 0.44 PGA1_c05760 putative tyrosine recombinase XerC 0.38 PGA1_c14060 tyrosine recombinase XerD 0.46 9
Agrobacterium fabrum C58 0.43 Atu2628 site-specific recombinase 0.34 Atu3629 site-specific tyrosine recombinase XerD — —
Magnetospirillum magneticum AMB-1 0.43 AMB_RS21485 tyrosine recombinase XerC 0.36 AMB_RS19880 site-specific tyrosine recombinase XerD — —
Rhizobium sp. OAE497 0.42 ABIE40_RS17950 tyrosine recombinase XerC 0.38 ABIE40_RS17685 site-specific tyrosine recombinase XerD low > 107
Sinorhizobium meliloti 1021 0.42 SMc02489 site-specific tyrosine recombinase XerC 0.39 SMc00691 site-specific tyrosine recombinase XerD — —
Rhodopseudomonas palustris CGA009 0.42 TX73_000945 tyrosine recombinase XerC 0.37 TX73_002625 site-specific tyrosine recombinase XerD 0.48 2
Bosea sp. OAE506 0.41 ABIE41_RS07870 tyrosine recombinase XerC 0.34 ABIE41_RS06100 site-specific tyrosine recombinase XerD 0.58 10
Rhodospirillum rubrum S1H 0.41 Rru_A1220 Phage integrase (NCBI) 0.33 Rru_A3738 Phage integrase (NCBI) — —
Azospirillum sp. SherDot2 0.40 MPMX19_02110 Tyrosine recombinase XerC 0.38 MPMX19_02643 Tyrosine recombinase XerD — —
Dechlorosoma suillum PS 0.27 Dsui_0651 tyrosine recombinase XerC 0.25 Dsui_2597 tyrosine recombinase XerD low > 51
Lysobacter sp. OAE881 0.27 ABIE51_RS03035 tyrosine recombinase XerC 0.30 ABIE51_RS04495 site-specific tyrosine recombinase XerD 0.84 1
Paraburkholderia bryophila 376MFSha3.1 0.27 H281DRAFT_02202 integrase/recombinase XerC 0.23 H281DRAFT_04126 integrase/recombinase XerD — —
Dyella japonica UNC79MFTsu3.2 0.27 ABZR86_RS15025 tyrosine recombinase XerC 0.26 ABZR86_RS19225 site-specific tyrosine recombinase XerD 0.64 15
Burkholderia phytofirmans PsJN 0.27 BPHYT_RS01655 tyrosine recombinase XerC 0.23 BPHYT_RS15950 tyrosine recombinase XerD — —
Paraburkholderia graminis OAS925 0.27 ABIE53_000426 integrase/recombinase XerC 0.23 ABIE53_003361 integrase/recombinase XerD — —
Shewanella loihica PV-4 0.27 Shew_0325 tyrosine recombinase XerC (RefSeq) 0.28 Shew_0770 tyrosine recombinase XerD (RefSeq) 0.30 14
Alteromonas macleodii MIT1002 0.26 MIT1002_00157 Tyrosine recombinase XerC 0.28 MIT1002_00786 Tyrosine recombinase XerD low > 70
Pseudomonas fluorescens FW300-N2C3 0.26 AO356_12725 recombinase XerC 0.27 AO356_06385 recombinase XerD 0.59 4
Pseudomonas fluorescens GW456-L13 0.26 PfGW456L13_842 Tyrosine recombinase XerC 0.26 PfGW456L13_1721 Tyrosine recombinase XerD 0.45 3
Pseudomonas fluorescens FW300-N1B4 0.26 Pf1N1B4_2171 Tyrosine recombinase XerC 0.26 Pf1N1B4_3011 Tyrosine recombinase XerD low > 87
Pseudomonas fluorescens FW300-N2E2 0.26 Pf6N2E2_4416 Tyrosine recombinase XerC 0.27 Pf6N2E2_3145 Tyrosine recombinase XerD — —
Kangiella aquimarina DSM 16071 0.26 B158DRAFT_0244 tyrosine recombinase XerC subunit 0.27 B158DRAFT_2265 tyrosine recombinase XerD 0.84 1
Pseudomonas sp. RS175 0.26 PFR28_04378 Tyrosine recombinase XerC 0.27 PFR28_00331 Tyrosine recombinase XerD 0.54 1
Pseudomonas syringae pv. syringae B728a 0.26 Psyr_0185 tyrosine recombinase XerC subunit 0.27 Psyr_1286 tyrosine recombinase XerD subunit 0.40 2
Mucilaginibacter yixingensis YX-36 DSM 26809 0.26 ABZR88_RS17800 tyrosine-type recombinase/integrase 0.28 ABZR88_RS10220 site-specific tyrosine recombinase XerD 0.46 37
Echinicola vietnamensis KMM 6221, DSM 17526 0.26 Echvi_0827 Site-specific recombinase XerD 0.27 Echvi_1809 tyrosine recombinase XerD 0.30 4
Pseudomonas fluorescens FW300-N2E3 0.26 AO353_09050 recombinase XerC 0.27 AO353_04365 recombinase XerD 0.51 1
Pseudomonas syringae pv. syringae B728a ΔmexB 0.26 Psyr_0185 tyrosine recombinase XerC subunit 0.27 Psyr_1286 tyrosine recombinase XerD subunit low > 86
Paraburkholderia sabiae LMG 24235 0.26 QEN71_RS00355 tyrosine recombinase XerC 0.22 QEN71_RS02755 site-specific tyrosine recombinase XerD — —
Pseudomonas putida KT2440 0.26 PP_5230 Tyrosine recombinase XerC 0.27 PP_1468 Tyrosine recombinase XerD 0.41 8
Xanthomonas campestris pv. campestris strain 8004 0.25 Xcc-8004.847.1 Site-specific tyrosine recombinase 0.28 Xcc-8004.4441.1 Tyrosine recombinase XerD — —
Pseudomonas sp. S08-1 0.25 OH686_13785 tyrosine recombinase XerC 0.28 OH686_17750 tyrosine recombinase XerD low > 80
Rhodanobacter denitrificans MT42 0.25 LRK55_RS08300 tyrosine recombinase XerC 0.26 LRK55_RS04515 site-specific tyrosine recombinase XerD low > 63
Shewanella sp. ANA-3 0.25 Shewana3_0393 tyrosine recombinase XerC (RefSeq) 0.29 Shewana3_3331 tyrosine recombinase XerD (RefSeq) 0.55 1
Bacteroides ovatus ATCC 8483 0.25 BACOVA_01050 site-specific recombinase, phage integrase family/ribosomal subunit interface protein 0.30 BACOVA_02123 tyrosine recombinase XerD low > 94
Rhodanobacter sp. FW510-T8 0.25 OKGIIK_15325 xerC tyrosine recombinase XerC 0.27 OKGIIK_11520 xerD site-specific tyrosine recombinase XerD — —
Pedobacter sp. GW460-11-11-14-LB5 0.25 CA265_RS02835 integrase 0.28 CA265_RS09520 site-specific tyrosine recombinase XerD 0.56 4
Hydrogenophaga sp. GW460-11-11-14-LB1 0.25 GFF547 Tyrosine recombinase XerC 0.24 GFF5461 Tyrosine recombinase XerD low > 90
Cupriavidus basilensis FW507-4G11 0.25 RR42_RS00615 recombinase XerC 0.22 RR42_RS03345 recombinase XerD 0.45 3
Herbaspirillum seropedicae SmR1 0.25 HSERO_RS21475 recombinase XerC 0.24 HSERO_RS04265 tyrosine recombinase XerD 0.24 73
Rhodanobacter denitrificans FW104-10B01 0.25 LRK54_RS08535 tyrosine recombinase XerC 0.26 LRK54_RS04735 site-specific tyrosine recombinase XerD low > 59
Vibrio cholerae E7946 ATCC 55056 0.25 CSW01_00650 tyrosine recombinase XerC 0.32 CSW01_12250 site-specific tyrosine recombinase XerD 0.91 1
Variovorax sp. SCN45 0.25 GFF4490 Site-specific tyrosine recombinase XerC 0.23 GFF2772 Site-specific tyrosine recombinase XerD low > 127
Pantoea sp. MT58 0.25 IAI47_18400 tyrosine recombinase XerC 0.31 IAI47_03820 site-specific tyrosine recombinase XerD 0.48 2
Erwinia tracheiphila SCR3 0.24 LU632_RS24135 xerC tyrosine recombinase XerC 0.32 LU632_RS05975 xerD site-specific tyrosine recombinase XerD — —
Castellaniella sp019104865 MT123 0.24 ABCV34_RS13455 tyrosine recombinase XerC 0.22 ABCV34_RS00515 site-specific tyrosine recombinase XerD 0.43 12
Acidovorax sp. GW101-3H11 0.24 Ac3H11_1995 Tyrosine recombinase XerC 0.24 Ac3H11_302 Tyrosine recombinase XerD — —
Pseudomonas fluorescens SBW25-INTG 0.24 PFLU_RS29280 tyrosine recombinase XerC 0.26 PFLU_RS24560 site-specific tyrosine recombinase XerD 0.66 1
Pseudomonas fluorescens SBW25 0.24 PFLU_RS29280 tyrosine recombinase XerC 0.26 PFLU_RS24560 site-specific tyrosine recombinase XerD low > 109
Pseudomonas simiae WCS417 0.24 PS417_27595 recombinase XerC 0.27 PS417_22895 tyrosine recombinase XerD 0.38 4
Bacteroides thetaiotaomicron VPI-5482 0.24 BT2742 integrase, site-specific recombinase (NCBI ptt file) 0.29 BT2843 integrase (NCBI ptt file) low > 81
Ralstonia solanacearum GMI1000 0.24 RS_RS00260 Tyrosine recombinase XerC 1 0.23 RS_RS12755 tyrosine recombinase XerD — —
Ralstonia solanacearum PSI07 0.24 RPSI07_RS23690 tyrosine recombinase XerC 0.22 RPSI07_RS12160 site-specific tyrosine recombinase XerD low > 81
Rahnella sp. WP5 0.24 EX31_RS15165 tyrosine recombinase XerC 0.30 EX31_RS13480 site-specific tyrosine recombinase XerD 0.78 1
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.23 GFF239 Tyrosine recombinase XerC 0.31 GFF2991 Tyrosine recombinase XerD — —
Dickeya dianthicola 67-19 0.23 HGI48_RS20045 tyrosine recombinase XerC 0.30 HGI48_RS03440 site-specific tyrosine recombinase XerD 0.52 59
Bacteroides stercoris CC31F 0.23 HMPREF1181_RS00625 tyrosine recombinase XerC 0.29 HMPREF1181_RS01250 site-specific tyrosine recombinase XerD low > 56
Variovorax sp. OAS795 0.23 ABID97_RS06150 tyrosine recombinase XerC 0.23 ABID97_RS20265 site-specific tyrosine recombinase XerD 0.68 2
Ralstonia solanacearum UW163 0.23 UW163_RS03905 tyrosine recombinase XerC 0.24 UW163_RS08485 site-specific tyrosine recombinase XerD — —
Escherichia coli ECRC99 0.23 KEDOAH_13730 xerC tyrosine recombinase XerC 0.31 KEDOAH_08570 xerD site-specific tyrosine recombinase XerD — —
Escherichia coli ECRC98 0.23 JDDGAC_18045 xerC tyrosine recombinase XerC 0.31 JDDGAC_23210 xerD site-specific tyrosine recombinase XerD — —
Escherichia coli ECRC102 0.23 NIAGMN_12175 xerC tyrosine recombinase XerC 0.31 NIAGMN_17335 xerD site-specific tyrosine recombinase XerD — —
Escherichia coli ECRC101 0.23 MCAODC_04925 xerC tyrosine recombinase XerC 0.31 MCAODC_10090 xerD site-specific tyrosine recombinase XerD — —
Ralstonia solanacearum IBSBF1503 0.23 RALBFv3_RS09675 tyrosine recombinase XerC 0.24 RALBFv3_RS05140 site-specific tyrosine recombinase XerD low > 76
Escherichia coli ECRC100 0.23 OKFHMN_14420 xerC tyrosine recombinase XerC 0.31 OKFHMN_19570 xerD site-specific tyrosine recombinase XerD low > 80
Dickeya dianthicola ME23 0.23 DZA65_RS21090 tyrosine recombinase XerC 0.30 DZA65_RS03485 site-specific tyrosine recombinase XerD — —
Escherichia coli BL21 0.23 ECD_03687 site-specific tyrosine recombinase 0.31 ECD_02726 site-specific tyrosine recombinase 0.64 1
Klebsiella michiganensis M5al 0.23 BWI76_RS01210 tyrosine recombinase XerC 0.31 BWI76_RS23815 site-specific tyrosine recombinase XerD — —
Enterobacter asburiae PDN3 0.23 EX28DRAFT_4480 tyrosine recombinase XerC 0.32 EX28DRAFT_2945 tyrosine recombinase XerD — —
Pseudomonas stutzeri RCH2 0.23 Psest_3767 tyrosine recombinase XerC 0.27 Psest_3129 tyrosine recombinase XerD 0.31 12
Escherichia coli BW25113 0.23 b3811 xerC site-specific tyrosine recombinase XerC (NCBI) 0.31 b2894 xerD site-specific tyrosine recombinase XerD (NCBI) 0.62 7
Escherichia coli ECOR38 0.23 HEPCGN_13125 xerC tyrosine recombinase XerC 0.31 HEPCGN_18860 xerD site-specific tyrosine recombinase XerD 0.54 53
Escherichia coli ECRC62 0.23 BNILDI_04985 xerC tyrosine recombinase XerC 0.31 BNILDI_10025 xerD site-specific tyrosine recombinase XerD low > 75
Escherichia coli ECOR27 0.23 NOLOHH_06550 xerC tyrosine recombinase XerC 0.31 NOLOHH_11495 xerD site-specific tyrosine recombinase XerD 0.55 27
Escherichia coli HS(pFamp)R (ATCC 700891) 0.23 OHPLBJKB_04239 Tyrosine recombinase XerC 0.31 OHPLBJKB_00821 Tyrosine recombinase XerD 0.40 9
Escherichia coli Nissle 1917 0.23 ECOLIN_RS21875 tyrosine recombinase XerC 0.31 ECOLIN_RS16125 site-specific tyrosine recombinase XerD 0.60 5
Escherichia fergusonii Becca 0.23 EFB2_04826 Tyrosine recombinase XerC 0.31 EFB2_01007 Tyrosine recombinase XerD low > 86
Pontibacter actiniarum KMM 6156, DSM 19842 0.22 CA264_19035 integrase 0.29 CA264_00850 site-specific tyrosine recombinase XerD — —
Phocaeicola vulgatus CL09T03C04 0.22 HMPREF1058_RS09445 tyrosine-type recombinase/integrase 0.26 HMPREF1058_RS09680 site-specific tyrosine recombinase XerD low > 67
Ralstonia sp. UNC404CL21Col 0.22 ABZR87_RS05065 tyrosine recombinase XerC 0.20 ABZR87_RS00795 site-specific tyrosine recombinase XerD 0.59 5
Parabacteroides merdae CL09T00C40 0.22 HMPREF1078_RS10885 tyrosine recombinase XerC 0.28 HMPREF1078_RS04705 site-specific tyrosine recombinase XerD low > 61
Phocaeicola dorei CL03T12C01 0.22 ABI39_RS03835 tyrosine-type recombinase/integrase 0.26 ABI39_RS07000 site-specific tyrosine recombinase XerD — —
Desulfovibrio vulgaris Miyazaki F 0.21 DvMF_0767 integrase family protein (RefSeq) 0.24 DvMF_0359 tyrosine recombinase XerD (RefSeq) 0.44 4

Not shown: 5 genomes with orthologs for Ga0059261_2764 only; 7 genomes with orthologs for Ga0059261_3595 only