| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 1.0 | GFF4305 | | tRNA-guanine transglycosylase (EC 2.4.2.29) | 1.0 | GFF55 | | [Protein-PII] uridylyltransferase (EC 2.7.7.59) | 0.84 | 3 |
| Enterobacter asburiae PDN3 | 0.99 | EX28DRAFT_2565 | | tRNA-guanine transglycosylase | 0.93 | EX28DRAFT_3754 | | UTP--GlnB (protein PII) uridylyltransferase, GlnD | low | > 76 |
| Klebsiella michiganensis M5al | 0.99 | BWI76_RS06300 | | tRNA guanosine(34) transglycosylase Tgt | 0.89 | BWI76_RS05200 | | bifunctional uridylyltransferase/uridylyl-removing protein | — | — |
| Enterobacter sp. TBS_079 | 0.99 | MPMX20_00997 | | Queuine tRNA-ribosyltransferase | 0.93 | MPMX20_00851 | | Bifunctional uridylyltransferase/uridylyl-removing enzyme | — | — |
| Escherichia coli ECOR38 | 0.98 | HEPCGN_07145 | tgt | tRNA guanosine(34) transglycosylase Tgt | 0.94 | HEPCGN_08185 | glnD | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | — | — |
| Escherichia fergusonii Becca | 0.98 | EFB2_03651 | | Queuine tRNA-ribosyltransferase | 0.93 | EFB2_03878 | | Bifunctional uridylyltransferase/uridylyl-removing enzyme | — | — |
| Escherichia coli ECOR27 | 0.98 | NOLOHH_01440 | tgt | tRNA guanosine(34) transglycosylase Tgt | 0.94 | NOLOHH_02580 | glnD | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | — | — |
| Escherichia coli ECRC98 | 0.98 | JDDGAC_12160 | tgt | tRNA guanosine(34) transglycosylase Tgt | 0.93 | JDDGAC_13830 | glnD | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | — | — |
| Escherichia coli ECRC62 | 0.98 | BNILDI_22855 | tgt | tRNA guanosine(34) transglycosylase Tgt | 0.94 | BNILDI_09090 | glnD | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | low | > 75 |
| Escherichia coli BW25113 | 0.98 | b0406 | tgt | queuine tRNA-ribosyltransferase (NCBI) | 0.94 | b0167 | glnD | PII uridylyl-transferase (NCBI) | low | > 76 |
| Escherichia coli ECRC99 | 0.98 | KEDOAH_19460 | tgt | tRNA guanosine(34) transglycosylase Tgt | 0.94 | KEDOAH_17920 | glnD | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.98 | OHPLBJKB_03270 | | Queuine tRNA-ribosyltransferase | 0.94 | OHPLBJKB_03497 | | Bifunctional uridylyltransferase/uridylyl-removing enzyme | low | > 73 |
| Escherichia coli ECRC100 | 0.98 | OKFHMN_08505 | tgt | tRNA guanosine(34) transglycosylase Tgt | 0.94 | OKFHMN_10235 | glnD | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | — | — |
| Escherichia coli ECRC102 | 0.98 | NIAGMN_06560 | tgt | tRNA guanosine(34) transglycosylase Tgt | 0.94 | NIAGMN_08085 | glnD | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | — | — |
| Escherichia coli Nissle 1917 | 0.98 | ECOLIN_RS02445 | | tRNA guanosine(34) transglycosylase Tgt | 0.93 | ECOLIN_RS00915 | | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | — | — |
| Escherichia coli BL21 | 0.98 | ECD_00354 | | tRNA-guanine transglycosylase | 0.94 | ECD_00165 | | uridylyltransferase | low | > 61 |
| Escherichia coli ECRC101 | 0.98 | MCAODC_27730 | tgt | tRNA guanosine(34) transglycosylase Tgt | 0.94 | MCAODC_00750 | glnD | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | — | — |
| Pantoea sp. MT58 | 0.95 | IAI47_14805 | | tRNA guanosine(34) transglycosylase Tgt | 0.78 | IAI47_15540 | | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | low | > 76 |
| Dickeya dadantii 3937 | 0.93 | DDA3937_RS05470 | | tRNA guanosine(34) transglycosylase Tgt | 0.76 | DDA3937_RS05105 | | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | low | > 74 |
| Dickeya dianthicola 67-19 | 0.92 | HGI48_RS05530 | | tRNA guanosine(34) transglycosylase Tgt | 0.76 | HGI48_RS05105 | | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | low | > 71 |
| Pectobacterium carotovorum WPP14 | 0.92 | HER17_RS15990 | | tRNA guanosine(34) transglycosylase Tgt | 0.77 | HER17_RS16345 | | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | low | > 75 |
| Rahnella sp. WP5 | 0.92 | EX31_RS22095 | | tRNA guanosine(34) transglycosylase Tgt | 0.77 | EX31_RS13045 | | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | low | > 89 |
| Dickeya dianthicola ME23 | 0.92 | DZA65_RS05855 | | tRNA guanosine(34) transglycosylase Tgt | 0.76 | DZA65_RS05445 | | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | low | > 75 |
| Erwinia tracheiphila SCR3 | 0.92 | LU632_RS18500 | tgt | tRNA guanosine(34) transglycosylase Tgt | 0.76 | LU632_RS19980 | glnD | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | low | > 74 |
| Serratia liquefaciens MT49 | 0.92 | IAI46_04840 | | tRNA guanosine(34) transglycosylase Tgt | 0.79 | IAI46_20270 | | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | low | > 86 |
| Shewanella loihica PV-4 | 0.86 | Shew_2337 | tgt | queuine tRNA-ribosyltransferase (RefSeq) | 0.43 | Shew_2637 | | PII uridylyl-transferase (RefSeq) | low | > 60 |
| Shewanella sp. ANA-3 | 0.85 | Shewana3_1435 | tgt | queuine tRNA-ribosyltransferase (RefSeq) | 0.43 | Shewana3_2817 | | PII uridylyl-transferase (RefSeq) | low | > 73 |
| Vibrio cholerae E7946 ATCC 55056 | 0.85 | CSW01_03850 | | tRNA guanosine(34) transglycosylase Tgt | 0.51 | CSW01_11520 | | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | low | > 62 |
| Shewanella oneidensis MR-1 | 0.85 | SO3113 | tgt | queuine tRNA-ribosyltransferase (NCBI ptt file) | 0.43 | SO1626 | glnD | protein-P-II uridylyltransferase (NCBI ptt file) | low | > 76 |
| Shewanella amazonensis SB2B | 0.85 | Sama_2193 | tgt | queuine tRNA-ribosyltransferase (RefSeq) | 0.45 | Sama_1137 | | PII uridylyl-transferase (RefSeq) | low | > 62 |
| Alteromonas macleodii MIT1002 | 0.77 | MIT1002_02813 | | Queuine tRNA-ribosyltransferase | 0.39 | MIT1002_01001 | | PII uridylyl-transferase | low | > 70 |
| Pseudomonas sp. S08-1 | 0.75 | OH686_17430 | | tRNA-guanine transglycosylase | 0.36 | OH686_06495 | | protein-P-II uridylyltransferase | low | > 80 |
| Pseudomonas stutzeri RCH2 | 0.73 | Psest_1242 | | tRNA-guanine transglycosylase, queuosine-34-forming | 0.37 | Psest_2845 | | [Protein-PII] uridylyltransferase | 0.22 | 25 |
| Pseudomonas sp. RS175 | 0.73 | PFR28_00277 | | Queuine tRNA-ribosyltransferase | 0.35 | PFR28_00394 | | Bifunctional uridylyltransferase/uridylyl-removing enzyme | 0.28 | 46 |
| Pseudomonas fluorescens FW300-N2E3 | 0.73 | AO353_15790 | | queuine tRNA-ribosyltransferase | 0.36 | AO353_16450 | | protein-PII uridylyltransferase | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.73 | PfGW456L13_4882 | | tRNA-guanine transglycosylase (EC 2.4.2.29) | 0.36 | PfGW456L13_4711 | | [Protein-PII] uridylyltransferase (EC 2.7.7.59) | low | > 87 |
| Pseudomonas fluorescens FW300-N1B4 | 0.73 | Pf1N1B4_3006 | | tRNA-guanine transglycosylase (EC 2.4.2.29) | 0.37 | Pf1N1B4_3081 | | [Protein-PII] uridylyltransferase (EC 2.7.7.59) | 0.40 | 79 |
| Pseudomonas syringae pv. syringae B728a | 0.72 | Psyr_1228 | | tRNA-guanine transglycosylase | 0.36 | Psyr_1341 | | Protein-P-II uridylyltransferase | — | — |
| Kangiella aquimarina DSM 16071 | 0.72 | B158DRAFT_2516 | | tRNA-guanine transglycosylase (EC 2.4.2.29) | 0.32 | B158DRAFT_1072 | | UTP--GlnB (protein PII) uridylyltransferase, GlnD | low | > 40 |
| Marinobacter adhaerens HP15 | 0.72 | HP15_1479 | | queuine tRNA-ribosyltransferase | 0.36 | HP15_1163 | | [protein-PII] uridylyltransferase | low | > 73 |
| Pseudomonas fluorescens FW300-N2C3 | 0.72 | AO356_06690 | | queuine tRNA-ribosyltransferase | 0.37 | AO356_06050 | | protein-PII uridylyltransferase | low | > 104 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.72 | Psyr_1228 | | tRNA-guanine transglycosylase | 0.36 | Psyr_1341 | | Protein-P-II uridylyltransferase | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.72 | Pf6N2E2_3198 | | tRNA-guanine transglycosylase (EC 2.4.2.29) | 0.37 | Pf6N2E2_3072 | | [Protein-PII] uridylyltransferase (EC 2.7.7.59) | 0.37 | 16 |
| Pseudomonas putida KT2440 | 0.72 | PP_0833 | | queuine tRNA-ribosyltransferase | 0.36 | PP_1589 | | uridylyltransferase | low | > 96 |
| Pseudomonas simiae WCS417 | 0.72 | PS417_23245 | | queuine tRNA-ribosyltransferase | 0.37 | PS417_06200 | | protein-PII uridylyltransferase | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.72 | PFLU_RS24900 | | tRNA guanosine(34) transglycosylase Tgt | 0.36 | PFLU_RS06265 | | [protein-PII] uridylyltransferase | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.72 | PFLU_RS24900 | | tRNA guanosine(34) transglycosylase Tgt | 0.36 | PFLU_RS06265 | | [protein-PII] uridylyltransferase | low | > 109 |
| Dechlorosoma suillum PS | 0.68 | Dsui_3323 | | tRNA-guanine transglycosylase, queuosine-34-forming | 0.29 | Dsui_2696 | | (protein-PII) uridylyltransferase | low | > 51 |
| Acinetobacter radioresistens SK82 | 0.68 | MPMX26_00438 | | Queuine tRNA-ribosyltransferase | 0.34 | MPMX26_01867 | | Bifunctional uridylyltransferase/uridylyl-removing enzyme | low | > 36 |
| Dyella japonica UNC79MFTsu3.2 | 0.66 | ABZR86_RS09540 | | tRNA guanosine(34) transglycosylase Tgt | 0.33 | ABZR86_RS21575 | | [protein-PII] uridylyltransferase | low | > 74 |
| Rhodanobacter denitrificans FW104-10B01 | 0.66 | LRK54_RS03130 | | tRNA guanosine(34) transglycosylase Tgt | 0.31 | LRK54_RS03245 | | [protein-PII] uridylyltransferase | — | — |
| Rhodanobacter denitrificans MT42 | 0.66 | LRK55_RS02880 | | tRNA guanosine(34) transglycosylase Tgt | 0.31 | LRK55_RS02995 | | [protein-PII] uridylyltransferase | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.66 | RR42_RS17400 | | queuine tRNA-ribosyltransferase | 0.26 | RR42_RS11885 | | (protein-PII) uridylyltransferase | low | > 128 |
| Herbaspirillum seropedicae SmR1 | 0.64 | HSERO_RS06175 | | queuine tRNA-ribosyltransferase | 0.28 | HSERO_RS10865 | | PII uridylyl-transferase | low | > 78 |
| Rhodanobacter sp. FW510-T8 | 0.64 | OKGIIK_10000 | tgt | tRNA guanosine(34) transglycosylase Tgt | 0.30 | OKGIIK_10125 | glnD | [protein-PII] uridylyltransferase | low | > 52 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.64 | Xcc-8004.2168.1 | | tRNA-guanine transglycosylase (EC 2.4.2.29) | 0.29 | Xcc-8004.3543.1 | | [Protein-PII] uridylyltransferase (EC 2.7.7.59) | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.64 | QEN71_RS26640 | | tRNA guanosine(34) transglycosylase Tgt | 0.28 | QEN71_RS06410 | | [protein-PII] uridylyltransferase | low | > 153 |
| Castellaniella sp019104865 MT123 | 0.64 | ABCV34_RS15365 | | tRNA guanosine(34) transglycosylase Tgt | 0.25 | ABCV34_RS04120 | | [protein-PII] uridylyltransferase | low | > 48 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.63 | H281DRAFT_04670 | | tRNA-guanine transglycosylase | 0.28 | H281DRAFT_00608 | | UTP--GlnB (protein PII) uridylyltransferase, GlnD | low | > 103 |
| Burkholderia phytofirmans PsJN | 0.63 | BPHYT_RS03410 | | queuine tRNA-ribosyltransferase | 0.28 | BPHYT_RS12150 | | PII uridylyl-transferase | low | > 109 |
| Ralstonia sp. UNC404CL21Col | 0.63 | ABZR87_RS01280 | | tRNA guanosine(34) transglycosylase Tgt | 0.28 | ABZR87_RS11815 | | [protein-PII] uridylyltransferase | low | > 80 |
| Ralstonia solanacearum UW163 | 0.63 | UW163_RS07940 | | tRNA guanosine(34) transglycosylase Tgt | 0.27 | UW163_RS13695 | | [protein-PII] uridylyltransferase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.63 | RALBFv3_RS05685 | | tRNA guanosine(34) transglycosylase Tgt | 0.27 | RALBFv3_RS00365 | | [protein-PII] uridylyltransferase | low | > 76 |
| Ralstonia solanacearum GMI1000 | 0.62 | RS_RS13575 | | tRNA guanosine(34) transglycosylase Tgt | 0.28 | RS_RS07035 | | bifunctional uridylyltransferase/uridylyl-removing protein | — | — |
| Ralstonia solanacearum PSI07 | 0.61 | RPSI07_RS11615 | | tRNA guanosine(34) transglycosylase Tgt | 0.28 | RPSI07_RS17110 | | [protein-PII] uridylyltransferase | low | > 81 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.60 | GFF2798 | | tRNA-guanine transglycosylase (EC 2.4.2.29) | 0.27 | GFF4563 | | [Protein-PII] uridylyltransferase (EC 2.7.7.59) | low | > 90 |
| Acidovorax sp. GW101-3H11 | 0.58 | Ac3H11_861 | | tRNA-guanine transglycosylase (EC 2.4.2.29) | 0.26 | Ac3H11_537 | | [Protein-PII] uridylyltransferase (EC 2.7.7.59) | low | > 79 |
| Variovorax sp. OAS795 | 0.57 | ABID97_RS01595 | | tRNA guanosine(34) transglycosylase Tgt | 0.28 | ABID97_RS15665 | | [protein-PII] uridylyltransferase | low | > 91 |
| Variovorax sp. SCN45 | 0.56 | GFF5534 | | Queuine tRNA-ribosyltransferase (EC 2.4.2.29) | 0.28 | GFF1322 | | [Protein-PII] uridylyltransferase (EC 2.7.7.59) / [Protein-PII]-UMP uridylyl-removing enzyme | low | > 127 |
| Rhodospirillum rubrum S1H | 0.55 | Rru_A0280 | | Queuine tRNA-ribosyltransferase (NCBI) | 0.21 | Rru_A3539 | | GlnB (protein PII) uridylyltransferase, GlnD (NCBI) | low | > 58 |
| Magnetospirillum magneticum AMB-1 | 0.53 | AMB_RS03090 | | tRNA guanosine(34) transglycosylase Tgt | 0.22 | AMB_RS22650 | | [protein-PII] uridylyltransferase | — | — |
| Azospirillum brasilense Sp245 | 0.52 | AZOBR_RS06295 | | queuine tRNA-ribosyltransferase | 0.20 | AZOBR_RS02110 | | protein-PII uridylyltransferase | low | > 97 |
| Azospirillum sp. SherDot2 | 0.52 | MPMX19_01697 | | Queuine tRNA-ribosyltransferase | 0.22 | MPMX19_00912 | | Bifunctional uridylyltransferase/uridylyl-removing enzyme | low | > 112 |
| Phaeobacter inhibens DSM 17395 | 0.52 | PGA1_c20570 | | queuine tRNA-ribosyltransferase Tgt | 0.21 | PGA1_c26750 | | uridylyltransferase GlnD | — | — |
| Desulfovibrio vulgaris Miyazaki F | 0.51 | DvMF_2757 | tgt | queuine tRNA-ribosyltransferase (RefSeq) | 0.11 | DvMF_0864 | | UTP-GlnB uridylyltransferase, GlnD (RefSeq) | low | > 51 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.51 | DVU0726 | tgt | queuine tRNA-ribosyltransferase (TIGR) | 0.12 | DVU1233 | glnD | protein-P-II uridylyltransferase, putative (TIGR) | low | > 55 |
| Dinoroseobacter shibae DFL-12 | 0.51 | Dshi_2346 | | queuine tRNA-ribosyltransferase (RefSeq) | 0.21 | Dshi_2833 | | UTP-GlnB uridylyltransferase, GlnD (RefSeq) | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.50 | Ga0059261_1017 | | tRNA-guanine transglycosylase | 0.22 | Ga0059261_2737 | | UTP--GlnB (protein PII) uridylyltransferase, GlnD | low | > 68 |
| Caulobacter crescentus NA1000 Δfur | 0.50 | CCNA_01659 | | queuine tRNA-ribosyltransferase | 0.20 | CCNA_00013 | | protein-PII uridylyltransferase | — | — |
| Caulobacter crescentus NA1000 | 0.50 | CCNA_01659 | | queuine tRNA-ribosyltransferase | 0.20 | CCNA_00013 | | protein-PII uridylyltransferase | low | > 66 |
| Sinorhizobium meliloti 1021 | 0.50 | SMc01206 | | queuine tRNA-ribosyltransferase | 0.21 | SMc01124 | | PII uridylyl-transferase | 0.68 | 3 |
| Bosea sp. OAE506 | 0.50 | ABIE41_RS18290 | | tRNA guanosine(34) transglycosylase Tgt | 0.22 | ABIE41_RS00205 | | [protein-PII] uridylyltransferase | low | > 77 |
| Rhodopseudomonas palustris CGA009 | 0.50 | TX73_013485 | | tRNA guanosine(34) transglycosylase Tgt | 0.21 | TX73_003060 | | [protein-PII] uridylyltransferase | low | > 86 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.50 | A4249_RS02905 | | tRNA guanosine(34) transglycosylase Tgt | 0.20 | A4249_RS13590 | | [protein-PII] uridylyltransferase | low | > 48 |
| Rhizobium sp. OAE497 | 0.49 | ABIE40_RS09435 | | tRNA guanosine(34) transglycosylase Tgt | 0.21 | ABIE40_RS01765 | | [protein-PII] uridylyltransferase | low | > 107 |
| Agrobacterium fabrum C58 | 0.49 | Atu1677 | | queuine tRNA-ribosyltransferase | 0.22 | Atu0346 | | uridylyltransferase/uridylyl-removing enzyme UTase | low | > 89 |