Conservation of cofitness between Psest_0718 and Psest_0477 in Pseudomonas stutzeri RCH2

89 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_0718 nicotinate-nucleotide pyrophosphorylase 1.0 Psest_0477 thiamine biosynthesis protein ThiC 0.55 3
Pseudomonas syringae pv. syringae B728a ΔmexB 0.86 Psyr_0815 nicotinate-nucleotide pyrophosphorylase (carboxylating) 0.90 Psyr_0544 hydroxymethylpyrimidine synthase low > 86
Pseudomonas syringae pv. syringae B728a 0.86 Psyr_0815 nicotinate-nucleotide pyrophosphorylase (carboxylating) 0.90 Psyr_0544 hydroxymethylpyrimidine synthase 0.74 3
Pseudomonas sp. RS175 0.84 PFR28_00098 Nicotinate-nucleotide pyrophosphorylase [carboxylating] 0.90 PFR28_05091 Phosphomethylpyrimidine synthase 0.70 3
Pseudomonas fluorescens FW300-N2E3 0.84 AO353_05520 nicotinate-nucleotide pyrophosphorylase 0.89 AO353_13010 thiamine biosynthesis protein ThiC 0.46 14
Pseudomonas fluorescens FW300-N1B4 0.83 Pf1N1B4_1153 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) 0.90 Pf1N1B4_1447 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.47 8
Pseudomonas simiae WCS417 0.83 PS417_03925 nicotinate-nucleotide pyrophosphorylase 0.90 PS417_02355 thiamine biosynthesis protein ThiC low > 88
Pseudomonas fluorescens SBW25 0.83 PFLU_RS03970 carboxylating nicotinate-nucleotide diphosphorylase 0.90 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC low > 109
Pseudomonas fluorescens SBW25-INTG 0.83 PFLU_RS03970 carboxylating nicotinate-nucleotide diphosphorylase 0.90 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC 0.50 14
Pseudomonas putida KT2440 0.81 PP_0787 quinolinate phosphoribosyltransferase (decarboxylating) monomer 0.90 PP_4922 Phosphomethylpyrimidine synthase 0.68 20
Pseudomonas fluorescens FW300-N2E2 0.81 Pf6N2E2_3346 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) 0.90 Pf6N2E2_3644 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) low > 103
Pseudomonas fluorescens FW300-N2C3 0.80 AO356_07370 nicotinate-nucleotide pyrophosphorylase 0.90 AO356_08810 thiamine biosynthesis protein ThiC low > 104
Pseudomonas sp. S08-1 0.80 OH686_16520 nicotinate-nucleotide diphosphorylase (carboxylating) 0.95 OH686_15885 phosphomethylpyrimidine synthase 0.72 17
Pseudomonas fluorescens GW456-L13 0.80 PfGW456L13_5082 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) 0.90 PfGW456L13_187 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) low > 87
Marinobacter adhaerens HP15 0.70 HP15_1305 nicotinate-nucleotide pyrophosphorylase 0.84 HP15_453 thiamine biosynthesis protein thiC — —
Dyella japonica UNC79MFTsu3.2 0.58 ABZR86_RS09850 carboxylating nicotinate-nucleotide diphosphorylase 0.78 ABZR86_RS17230 phosphomethylpyrimidine synthase ThiC low > 74
Shewanella amazonensis SB2B 0.57 Sama_0371 nicotinate-nucleotide diphosphorylase (carboxylating) (RefSeq) 0.71 Sama_1860 thiamine biosynthesis protein ThiC (RefSeq) — —
Dechlorosoma suillum PS 0.56 Dsui_2901 nicotinate-nucleotide pyrophosphorylase 0.78 Dsui_0422 thiamine biosynthesis protein ThiC — —
Rahnella sp. WP5 0.56 EX31_RS03515 carboxylating nicotinate-nucleotide diphosphorylase 0.71 EX31_RS16815 phosphomethylpyrimidine synthase ThiC low > 89
Alteromonas macleodii MIT1002 0.55 MIT1002_03008 Nicotinate-nucleotide pyrophosphorylase [carboxylating] 0.69 MIT1002_00097 Phosphomethylpyrimidine synthase — —
Pectobacterium carotovorum WPP14 0.55 HER17_RS03250 carboxylating nicotinate-nucleotide diphosphorylase 0.73 HER17_RS20380 phosphomethylpyrimidine synthase ThiC low > 75
Acinetobacter radioresistens SK82 0.55 MPMX26_00042 Nicotinate-nucleotide pyrophosphorylase [carboxylating] 0.76 MPMX26_00180 Phosphomethylpyrimidine synthase low > 36
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.55 GFF130 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) 0.72 GFF4198 Thiamin biosynthesis protein ThiC low > 78
Shewanella loihica PV-4 0.55 Shew_3435 nicotinate-nucleotide pyrophosphorylase (RefSeq) 0.71 Shew_2096 thiamine biosynthesis protein ThiC (RefSeq) — —
Dickeya dadantii 3937 0.54 DDA3937_RS17955 carboxylating nicotinate-nucleotide diphosphorylase 0.72 DDA3937_RS01175 phosphomethylpyrimidine synthase ThiC 0.78 29
Vibrio cholerae E7946 ATCC 55056 0.54 CSW01_12265 carboxylating nicotinate-nucleotide diphosphorylase 0.70 CSW01_00335 phosphomethylpyrimidine synthase low > 62
Dickeya dianthicola 67-19 0.54 HGI48_RS17890 carboxylating nicotinate-nucleotide diphosphorylase 0.71 HGI48_RS01170 phosphomethylpyrimidine synthase ThiC low > 71
Dickeya dianthicola ME23 0.54 DZA65_RS19035 carboxylating nicotinate-nucleotide diphosphorylase 0.71 DZA65_RS01215 phosphomethylpyrimidine synthase ThiC 0.88 3
Shewanella sp. ANA-3 0.54 Shewana3_0422 nicotinate-nucleotide pyrophosphorylase [carboxylating] (RefSeq) 0.70 Shewana3_1936 thiamine biosynthesis protein ThiC (RefSeq) — —
Castellaniella sp019104865 MT123 0.53 ABCV34_RS03695 carboxylating nicotinate-nucleotide diphosphorylase 0.76 ABCV34_RS10825 phosphomethylpyrimidine synthase ThiC low > 48
Serratia liquefaciens MT49 0.53 IAI46_03530 carboxylating nicotinate-nucleotide diphosphorylase 0.71 IAI46_01320 phosphomethylpyrimidine synthase ThiC low > 86
Ralstonia solanacearum PSI07 0.52 RPSI07_RS12655 nicotinate-nucleotide diphosphorylase (carboxylating) 0.73 RPSI07_RS23420 phosphomethylpyrimidine synthase ThiC low > 81
Escherichia coli ECRC101 0.52 MCAODC_01045 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.72 MCAODC_03875 thiC phosphomethylpyrimidine synthase ThiC — —
Escherichia coli ECRC99 0.52 KEDOAH_17625 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.72 KEDOAH_14785 thiC phosphomethylpyrimidine synthase ThiC — —
Escherichia coli BW25113 0.52 b0109 nadC nicotinate-nucleotide pyrophosphorylase (NCBI) 0.71 b3994 thiC thiamine biosynthesis protein ThiC (NCBI) 0.57 73
Escherichia coli BL21 0.52 ECD_00108 quinolinate phosphoribosyltransferase 0.71 ECD_03871 phosphomethylpyrimidine synthase low > 60
Escherichia fergusonii Becca 0.52 EFB2_03940 Nicotinate-nucleotide pyrophosphorylase [carboxylating] 0.72 EFB2_04617 Phosphomethylpyrimidine synthase low > 86
Escherichia coli ECRC62 0.52 BNILDI_08735 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.71 BNILDI_06005 thiC phosphomethylpyrimidine synthase ThiC — —
Escherichia coli ECRC101 0.52 OKFHMN_10530 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.72 OKFHMN_13375 thiC phosphomethylpyrimidine synthase ThiC — —
Escherichia coli ECRC98 0.52 JDDGAC_14125 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.72 JDDGAC_17000 thiC phosphomethylpyrimidine synthase ThiC — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.52 OHPLBJKB_03552 Nicotinate-nucleotide pyrophosphorylase [carboxylating] 0.71 OHPLBJKB_04056 Phosphomethylpyrimidine synthase low > 73
Escherichia coli ECOR27 0.52 NOLOHH_02875 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.71 NOLOHH_05520 thiC phosphomethylpyrimidine synthase ThiC low > 57
Escherichia coli Nissle 1917 0.52 ECOLIN_RS00585 carboxylating nicotinate-nucleotide diphosphorylase 0.72 ECOLIN_RS23040 phosphomethylpyrimidine synthase ThiC low > 52
Escherichia coli ECRC102 0.52 NIAGMN_08380 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.72 NIAGMN_11125 thiC phosphomethylpyrimidine synthase ThiC — —
Pantoea sp. MT58 0.52 IAI47_15845 carboxylating nicotinate-nucleotide diphosphorylase 0.72 IAI47_18085 phosphomethylpyrimidine synthase ThiC low > 76
Escherichia coli ECOR38 0.52 HEPCGN_08510 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.71 HEPCGN_12010 thiC phosphomethylpyrimidine synthase ThiC low > 85
Kangiella aquimarina DSM 16071 0.51 B158DRAFT_2135 nicotinate-nucleotide pyrophosphorylase [carboxylating] (EC 2.4.2.19) 0.73 B158DRAFT_0295 hydroxymethylpyrimidine synthase — —
Enterobacter sp. TBS_079 0.51 MPMX20_00800 Nicotinate-nucleotide pyrophosphorylase [carboxylating] 0.71 MPMX20_00217 Phosphomethylpyrimidine synthase low > 85
Enterobacter asburiae PDN3 0.51 EX28DRAFT_3702 nicotinate-nucleotide pyrophosphorylase [carboxylating] (EC 2.4.2.19) 0.71 EX28DRAFT_4536 phosphomethylpyrimidine synthase 0.73 4
Klebsiella michiganensis M5al 0.51 BWI76_RS04845 nicotinate-nucleotide pyrophosphorylase 0.71 BWI76_RS01555 phosphomethylpyrimidine synthase ThiC 0.64 5
Ralstonia solanacearum UW163 0.51 UW163_RS08940 nicotinate-nucleotide diphosphorylase (carboxylating) 0.73 UW163_RS03640 phosphomethylpyrimidine synthase ThiC — —
Ralstonia solanacearum IBSBF1503 0.51 RALBFv3_RS04730 nicotinate-nucleotide diphosphorylase (carboxylating) 0.73 RALBFv3_RS09940 phosphomethylpyrimidine synthase ThiC low > 76
Cupriavidus basilensis FW507-4G11 0.51 RR42_RS17015 nicotinate-nucleotide pyrophosphorylase 0.71 RR42_RS01290 thiamine biosynthesis protein ThiC low > 128
Ralstonia sp. UNC404CL21Col 0.51 ABZR87_RS00350 carboxylating nicotinate-nucleotide diphosphorylase 0.74 ABZR87_RS04785 phosphomethylpyrimidine synthase ThiC low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.51 GFF1217 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) 0.68 GFF4626 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) low > 90
Herbaspirillum seropedicae SmR1 0.50 HSERO_RS11070 nicotinate-nucleotide pyrophosphorylase 0.78 HSERO_RS02120 phosphomethylpyrimidine synthase ThiC low > 78
Paraburkholderia sabiae LMG 24235 0.50 QEN71_RS03065 carboxylating nicotinate-nucleotide diphosphorylase 0.76 QEN71_RS05480 phosphomethylpyrimidine synthase ThiC 0.86 3
Paraburkholderia graminis OAS925 0.50 ABIE53_003293 nicotinate-nucleotide pyrophosphorylase (carboxylating) 0.76 ABIE53_002857 phosphomethylpyrimidine synthase 0.40 4
Burkholderia phytofirmans PsJN 0.50 BPHYT_RS15645 nicotinate-nucleotide pyrophosphorylase 0.76 BPHYT_RS13220 phosphomethylpyrimidine synthase 0.50 5
Erwinia tracheiphila SCR3 0.50 LU632_RS03040 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.71 LU632_RS00970 thiC phosphomethylpyrimidine synthase ThiC low > 74
Paraburkholderia bryophila 376MFSha3.1 0.48 H281DRAFT_04070 nicotinate-nucleotide pyrophosphorylase [carboxylating] 0.76 H281DRAFT_00395 hydroxymethylpyrimidine synthase low > 103
Acidovorax sp. GW101-3H11 0.48 Ac3H11_3838 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) 0.67 Ac3H11_2027 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.81 15
Ralstonia solanacearum GMI1000 0.47 RS_RS12290 nicotinate-nucleotide diphosphorylase (carboxylating) 0.73 RS_RS00555 phosphomethylpyrimidine synthase 0.58 12
Variovorax sp. OAS795 0.47 ABID97_RS07410 carboxylating nicotinate-nucleotide diphosphorylase 0.68 ABID97_RS25235 phosphomethylpyrimidine synthase ThiC low > 91
Magnetospirillum magneticum AMB-1 0.44 AMB_RS19655 nicotinate-nucleotide diphosphorylase (carboxylating) 0.68 AMB_RS01125 phosphomethylpyrimidine synthase — —
Variovorax sp. SCN45 0.44 GFF2574 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) 0.69 GFF2000 Phosphomethylpyrimidine synthase ThiC (EC 4.1.99.17) low > 127
Bosea sp. OAE506 0.44 ABIE41_RS02500 carboxylating nicotinate-nucleotide diphosphorylase 0.63 ABIE41_RS02770 phosphomethylpyrimidine synthase ThiC low > 77
Lysobacter sp. OAE881 0.42 ABIE51_RS15405 carboxylating nicotinate-nucleotide diphosphorylase 0.77 ABIE51_RS17515 phosphomethylpyrimidine synthase ThiC low > 62
Xanthomonas campestris pv. campestris strain 8004 0.41 Xcc-8004.2009.1 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) 0.75 Xcc-8004.1066.1 hypothetical protein 0.40 41
Rhodopseudomonas palustris CGA009 0.39 TX73_005415 carboxylating nicotinate-nucleotide diphosphorylase 0.65 TX73_018540 phosphomethylpyrimidine synthase ThiC — —
Parabacteroides merdae CL09T00C40 0.39 HMPREF1078_RS16725 carboxylating nicotinate-nucleotide diphosphorylase 0.57 HMPREF1078_RS03485 phosphomethylpyrimidine synthase ThiC — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.39 CA264_16940 nicotinate-nucleotide diphosphorylase (carboxylating) 0.77 CA264_20435 phosphomethylpyrimidine synthase ThiC — —
Caulobacter crescentus NA1000 Δfur 0.38 CCNA_03009 nicotinate-nucleotide pyrophosphorylase 0.65 CCNA_02109 thiamine biosynthesis protein thiC — —
Caulobacter crescentus NA1000 0.38 CCNA_03009 nicotinate-nucleotide pyrophosphorylase 0.65 CCNA_02109 thiamine biosynthesis protein thiC — —
Brevundimonas sp. GW460-12-10-14-LB2 0.38 A4249_RS00635 carboxylating nicotinate-nucleotide diphosphorylase 0.63 A4249_RS15715 phosphomethylpyrimidine synthase ThiC low > 48
Echinicola vietnamensis KMM 6221, DSM 17526 0.38 Echvi_1158 nicotinate-nucleotide pyrophosphorylase 0.75 Echvi_3567 thiamine biosynthesis protein ThiC low > 79
Phocaeicola dorei CL03T12C01 0.37 ABI39_RS11900 carboxylating nicotinate-nucleotide diphosphorylase 0.58 ABI39_RS17760 phosphomethylpyrimidine synthase ThiC — —
Rhodospirillum rubrum S1H 0.37 Rru_A1432 Nicotinate-nucleotide pyrophosphorylase (NCBI) 0.61 Rru_A2008 Thiamine biosynthesis protein ThiC (NCBI) low > 58
Bacteroides ovatus ATCC 8483 0.37 BACOVA_04303 nicotinate-nucleotide diphosphorylase (carboxylating) 0.58 BACOVA_02358 thiamine biosynthesis protein ThiC 0.79 62
Bacteroides stercoris CC31F 0.37 HMPREF1181_RS10745 carboxylating nicotinate-nucleotide diphosphorylase 0.57 HMPREF1181_RS14685 phosphomethylpyrimidine synthase ThiC — —
Phocaeicola vulgatus CL09T03C04 0.37 HMPREF1058_RS15940 carboxylating nicotinate-nucleotide diphosphorylase 0.58 HMPREF1058_RS03280 phosphomethylpyrimidine synthase ThiC — —
Pedobacter sp. GW460-11-11-14-LB5 0.37 CA265_RS14530 nicotinate-nucleotide diphosphorylase (carboxylating) 0.74 CA265_RS20165 phosphomethylpyrimidine synthase ThiC low > 88
Mucilaginibacter yixingensis YX-36 DSM 26809 0.37 ABZR88_RS15695 carboxylating nicotinate-nucleotide diphosphorylase 0.75 ABZR88_RS08840 phosphomethylpyrimidine synthase ThiC — —
Bacteroides thetaiotaomicron VPI-5482 0.37 BT1560 nicotinate-nucleotide pyrophosphorylase (NCBI ptt file) 0.58 BT0650 thiamine biosynthesis protein ThiC (NCBI ptt file) — —
Sphingomonas koreensis DSMZ 15582 0.36 Ga0059261_0061 nicotinate-nucleotide pyrophosphorylase [carboxylating] (EC 2.4.2.19) 0.64 Ga0059261_2424 hydroxymethylpyrimidine synthase — —
Agrobacterium fabrum C58 0.35 Atu4096 nicotinate-nucleotide pyrophosphorylase 0.65 Atu2569 thiamine biosynthesis protein 0.86 5
Azospirillum sp. SherDot2 0.34 MPMX19_05672 putative nicotinate-nucleotide pyrophosphorylase [carboxylating] 0.64 MPMX19_00336 Phosphomethylpyrimidine synthase — —
Mycobacterium tuberculosis H37Rv 0.33 Rv1596 Probable nicotinate-nucleotide pyrophosphatase NadC 0.54 Rv0423c Probable thiamine biosynthesis protein ThiC — —
Sinorhizobium meliloti 1021 0.32 SMc02598 nicotinate-nucleotide pyrophosphorylase carboxylating protein 0.65 SM_b20615 thiamine biosynthesis protein ThiC low > 103
Phaeobacter inhibens DSM 17395 0.32 PGA1_c27810 nicotinate-nucleotide pyrophosphorylase 0.66 PGA1_c09110 thiamine biosynthesis protein ThiC low > 62

Not shown: 10 genomes with orthologs for Psest_0718 only; 4 genomes with orthologs for Psest_0477 only