Conservation of cofitness between PGA1_c34110 and PGA1_c03060 in Phaeobacter inhibens DSM 17395

83 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Phaeobacter inhibens DSM 17395 1.0 PGA1_c34110 branched-chain-amino-acid aminotransferase IlvE 1.0 PGA1_c03060 aspartate carbamoyltransferase PyrB 0.82 7
Dinoroseobacter shibae DFL-12 0.82 Dshi_3301 branched-chain amino acid aminotransferase (RefSeq) 0.83 Dshi_3091 aspartate carbamoyltransferase (RefSeq) — —
Azospirillum brasilense Sp245 0.61 AZOBR_RS16425 branched-chain amino acid aminotransferase 0.62 AZOBR_RS20575 aspartate carbamoyltransferase low > 97
Magnetospirillum magneticum AMB-1 0.60 AMB_RS02850 branched-chain amino acid aminotransferase 0.65 AMB_RS18300 aspartate carbamoyltransferase — —
Rhodospirillum rubrum S1H 0.59 Rru_A2223 Branched-chain amino acid aminotransferase I (NCBI) 0.63 Rru_A3190 Aspartate carbamoyltransferase (NCBI) low > 58
Caulobacter crescentus NA1000 0.58 CCNA_03024 branched-chain amino acid aminotransferase 0.54 CCNA_02525 aspartate carbamoyltransferase low > 66
Caulobacter crescentus NA1000 Δfur 0.58 CCNA_03024 branched-chain amino acid aminotransferase 0.54 CCNA_02525 aspartate carbamoyltransferase low > 67
Bosea sp. OAE506 0.56 ABIE41_RS11405 branched-chain amino acid aminotransferase 0.59 ABIE41_RS17230 aspartate carbamoyltransferase catalytic subunit low > 77
Brevundimonas sp. GW460-12-10-14-LB2 0.51 A4249_RS09820 branched-chain amino acid aminotransferase 0.58 A4249_RS04260 aspartate carbamoyltransferase catalytic subunit — —
Pseudomonas fluorescens GW456-L13 0.51 PfGW456L13_4923 Branched-chain amino acid aminotransferase (EC 2.6.1.42) 0.46 PfGW456L13_1016 Aspartate carbamoyltransferase (EC 2.1.3.2) — —
Pseudomonas stutzeri RCH2 0.37 Psest_0450 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) 0.47 Psest_0291 aspartate carbamoyltransferase — —
Paraburkholderia sabiae LMG 24235 0.37 QEN71_RS02410 branched-chain amino acid transaminase 0.46 QEN71_RS25780 aspartate carbamoyltransferase catalytic subunit low > 153
Paraburkholderia graminis OAS925 0.37 ABIE53_003432 branched-chain amino acid aminotransferase 0.45 ABIE53_001131 aspartate carbamoyltransferase catalytic subunit low > 113
Paraburkholderia bryophila 376MFSha3.1 0.37 H281DRAFT_04193 branched chain amino acid aminotransferase apoenzyme 0.45 H281DRAFT_04817 aspartate carbamoyltransferase low > 103
Burkholderia phytofirmans PsJN 0.37 BPHYT_RS16285 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) 0.46 BPHYT_RS04235 aspartate carbamoyltransferase low > 109
Pseudomonas sp. S08-1 0.36 OH686_09695 branched-chain amino acid aminotransferase 0.46 OH686_10940 aspartate carbamoyltransferase — —
Ralstonia solanacearum IBSBF1503 0.36 RALBFv3_RS12155 branched-chain amino acid transaminase 0.45 RALBFv3_RS12625 aspartate carbamoyltransferase catalytic subunit — —
Ralstonia solanacearum UW163 0.36 UW163_RS01455 branched-chain amino acid transaminase 0.45 UW163_RS00940 aspartate carbamoyltransferase catalytic subunit — —
Ralstonia solanacearum GMI1000 0.36 RS_RS02840 branched-chain amino acid transaminase 0.45 RS_RS03410 aspartate carbamoyltransferase — —
Ralstonia solanacearum PSI07 0.36 RPSI07_RS21175 branched-chain amino acid transaminase 0.45 RPSI07_RS20635 aspartate carbamoyltransferase catalytic subunit — —
Herbaspirillum seropedicae SmR1 0.36 HSERO_RS03330 branched-chain amino acid aminotransferase 0.45 HSERO_RS02330 aspartate carbamoyltransferase low > 78
Hydrogenophaga sp. GW460-11-11-14-LB1 0.35 GFF1835 Branched-chain amino acid aminotransferase (EC 2.6.1.42) 0.42 GFF651 Aspartate carbamoyltransferase (EC 2.1.3.2) low > 90
Variovorax sp. OAS795 0.35 ABID97_RS03790 branched-chain amino acid transaminase 0.45 ABID97_RS24660 aspartate carbamoyltransferase catalytic subunit low > 91
Dechlorosoma suillum PS 0.35 Dsui_3339 branched-chain amino acid aminotransferase, group I 0.46 Dsui_0596 aspartate carbamoyltransferase — —
Acidovorax sp. GW101-3H11 0.35 Ac3H11_3369 Branched-chain amino acid aminotransferase (EC 2.6.1.42) 0.45 Ac3H11_3978 Aspartate carbamoyltransferase (EC 2.1.3.2) — —
Variovorax sp. SCN45 0.35 GFF5079 Branched-chain amino acid aminotransferase (EC 2.6.1.42) 0.45 GFF2160 Aspartate carbamoyltransferase (EC 2.1.3.2) low > 127
Marinobacter adhaerens HP15 0.35 HP15_436 branched-chain-amino-acid aminotransferase 0.46 HP15_3507 aspartate carbamoyltransferase — —
Desulfovibrio vulgaris Hildenborough JW710 0.33 DVU3197 ilvE branched-chain amino acid aminotransferase (TIGR) 0.42 DVU2901 pyrB aspartate carbamoyltransferase (TIGR) — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.33 CA264_06940 branched-chain amino acid aminotransferase 0.39 CA264_20465 aspartate carbamoyltransferase low > 74
Acinetobacter radioresistens SK82 0.33 MPMX26_00445 Branched-chain-amino-acid aminotransferase 0.42 MPMX26_01099 Aspartate carbamoyltransferase low > 36
Desulfovibrio vulgaris Miyazaki F 0.33 DvMF_2268 branched-chain amino acid aminotransferase (RefSeq) 0.40 DvMF_1425 pyrB aspartate carbamoyltransferase catalytic subunit (RefSeq) low > 51
Dyella japonica UNC79MFTsu3.2 0.33 ABZR86_RS15965 branched-chain amino acid transaminase 0.36 ABZR86_RS10390 aspartate carbamoyltransferase catalytic subunit — —
Vibrio cholerae E7946 ATCC 55056 0.32 CSW01_00145 branched-chain-amino-acid transaminase 0.21 CSW01_12725 aspartate carbamoyltransferase low > 62
Rhodanobacter denitrificans FW104-10B01 0.32 LRK54_RS12020 branched-chain amino acid transaminase 0.36 LRK54_RS04220 aspartate carbamoyltransferase catalytic subunit — —
Rhodanobacter denitrificans MT42 0.32 LRK55_RS09980 branched-chain amino acid transaminase 0.36 LRK55_RS03990 aspartate carbamoyltransferase catalytic subunit — —
Dickeya dadantii 3937 0.32 DDA3937_RS20160 branched-chain-amino-acid transaminase 0.19 DDA3937_RS01925 aspartate carbamoyltransferase low > 74
Dickeya dianthicola ME23 0.32 DZA65_RS21340 branched-chain amino acid transaminase 0.20 DZA65_RS01970 aspartate carbamoyltransferase 0.76 15
Dickeya dianthicola 67-19 0.32 HGI48_RS20300 branched-chain-amino-acid transaminase 0.20 HGI48_RS01900 aspartate carbamoyltransferase low > 71
Rhodanobacter sp. FW510-T8 0.32 OKGIIK_11840 ilvE branched-chain amino acid transaminase 0.36 OKGIIK_11095 pyrB aspartate carbamoyltransferase catalytic subunit — —
Lysobacter sp. OAE881 0.32 ABIE51_RS16505 branched-chain amino acid transaminase 0.36 ABIE51_RS16015 aspartate carbamoyltransferase catalytic subunit low > 62
Serratia liquefaciens MT49 0.31 IAI46_24350 branched-chain-amino-acid transaminase 0.20 IAI46_02275 aspartate carbamoyltransferase low > 86
Enterobacter sp. TBS_079 0.31 MPMX20_04500 Branched-chain-amino-acid aminotransferase 0.20 MPMX20_00544 Aspartate carbamoyltransferase catalytic subunit 0.37 45
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.31 GFF2902 Branched-chain amino acid aminotransferase (EC 2.6.1.42) 0.20 GFF930 Aspartate carbamoyltransferase (EC 2.1.3.2) low > 78
Klebsiella michiganensis M5al 0.31 BWI76_RS00970 branched chain amino acid aminotransferase 0.20 BWI76_RS02995 aspartate carbamoyltransferase low > 92
Escherichia coli Nissle 1917 0.31 ECOLIN_RS21660 branched-chain-amino-acid transaminase 0.21 ECOLIN_RS24625 aspartate carbamoyltransferase low > 52
Escherichia coli ECRC99 0.31 KEDOAH_13505 ilvE branched-chain-amino-acid transaminase 0.21 KEDOAH_16290 pyrB aspartate carbamoyltransferase — —
Escherichia coli ECRC101 0.31 OKFHMN_14645 ilvE branched-chain-amino-acid transaminase 0.21 OKFHMN_11865 pyrB aspartate carbamoyltransferase — —
Escherichia coli ECRC102 0.31 NIAGMN_12400 ilvE branched-chain-amino-acid transaminase 0.21 NIAGMN_09715 pyrB aspartate carbamoyltransferase — —
Escherichia coli ECOR38 0.31 HEPCGN_13355 ilvE branched-chain-amino-acid transaminase 0.21 HEPCGN_10060 pyrB aspartate carbamoyltransferase low > 85
Escherichia fergusonii Becca 0.31 EFB2_04866 Branched-chain-amino-acid aminotransferase 0.21 EFB2_04288 Aspartate carbamoyltransferase catalytic subunit low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.31 OHPLBJKB_04283 Branched-chain-amino-acid aminotransferase 0.21 OHPLBJKB_03789 Aspartate carbamoyltransferase catalytic subunit low > 73
Escherichia coli ECOR27 0.31 NOLOHH_06780 ilvE branched-chain-amino-acid transaminase 0.21 NOLOHH_04125 pyrB aspartate carbamoyltransferase low > 57
Pectobacterium carotovorum WPP14 0.31 HER17_RS01070 branched-chain amino acid transaminase 0.21 HER17_RS19510 aspartate carbamoyltransferase 0.82 60
Escherichia coli ECRC98 0.31 JDDGAC_18265 ilvE branched-chain-amino-acid transaminase 0.21 JDDGAC_15505 pyrB aspartate carbamoyltransferase — —
Escherichia coli ECRC101 0.31 MCAODC_05150 ilvE branched-chain-amino-acid transaminase 0.21 MCAODC_02370 pyrB aspartate carbamoyltransferase — —
Escherichia coli ECRC62 0.31 BNILDI_04745 ilvE branched-chain-amino-acid transaminase 0.21 BNILDI_07385 pyrB aspartate carbamoyltransferase — —
Escherichia coli BL21 0.31 ECD_03648 branched-chain amino acid aminotransferase 0.21 ECD_04113 aspartate carbamoyltransferase, catalytic subunit low > 60
Escherichia coli BW25113 0.31 b3770 ilvE branched-chain amino acid aminotransferase (NCBI) 0.21 b4245 pyrB aspartate carbamoyltransferase catalytic subunit (NCBI) low > 76
Enterobacter asburiae PDN3 0.31 EX28DRAFT_4442 branched-chain amino acid aminotransferase, group I 0.20 EX28DRAFT_3446 aspartate carbamoyltransferase (EC 2.1.3.2) — —
Erwinia tracheiphila SCR3 0.31 LU632_RS24405 branched-chain amino acid transaminase 0.21 LU632_RS20950 pyrB aspartate carbamoyltransferase 0.67 43
Rahnella sp. WP5 0.30 EX31_RS15000 branched-chain amino acid transaminase 0.20 EX31_RS12785 aspartate carbamoyltransferase 0.81 75
Shewanella loihica PV-4 0.30 Shew_0291 branched-chain amino acid aminotransferase (RefSeq) 0.18 Shew_1013 aspartate carbamoyltransferase (RefSeq) low > 60
Pantoea sp. MT58 0.30 IAI47_01030 branched-chain amino acid transaminase 0.21 IAI47_16860 aspartate carbamoyltransferase 0.79 65
Pedobacter sp. GW460-11-11-14-LB5 0.27 CA265_RS15785 branched-chain-amino-acid transaminase 0.42 CA265_RS14660 aspartate carbamoyltransferase — —
Synechococcus elongatus PCC 7942 0.21 Synpcc7942_1029 ilvE branched-chain amino acid aminotransferase 0.37 Synpcc7942_0670 pyrB aspartate carbamoyltransferase catalytic subunit — —
Bacteroides ovatus ATCC 8483 0.20 BACOVA_03679 branched-chain-amino-acid transaminase 0.18 BACOVA_02450 aspartate carbamoyltransferase — —
Pseudomonas fluorescens SBW25-INTG 0.16 PFLU_RS19375 branched-chain amino acid aminotransferase 0.46 PFLU_RS28345 aspartate carbamoyltransferase — —
Pseudomonas fluorescens SBW25 0.16 PFLU_RS19375 branched-chain amino acid aminotransferase 0.46 PFLU_RS28345 aspartate carbamoyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.16 Psyr_1148 branched chain amino acid aminotransferase apoenzyme 0.46 Psyr_0482 aspartate carbamoyltransferase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.16 Psyr_1148 branched chain amino acid aminotransferase apoenzyme 0.46 Psyr_0482 aspartate carbamoyltransferase — —
Pseudomonas simiae WCS417 0.16 PS417_17565 branched-chain amino acid aminotransferase 0.46 PS417_26700 aspartate carbamoyltransferase catalytic subunit — —
Pseudomonas putida KT2440 0.15 PP_3511 Branched-chain-amino-acid aminotransferase 0.46 PP_4998 Aspartate carbamoyltransferase — —
Pseudomonas fluorescens FW300-N2C3 0.15 AO356_22970 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) 0.46 AO356_13450 aspartate carbamoyltransferase catalytic subunit — —
Pseudomonas fluorescens FW300-N2E3 0.15 AO353_26655 branched-chain amino acid aminotransferase 0.46 AO353_08135 aspartate carbamoyltransferase catalytic subunit — —
Pseudomonas fluorescens FW300-N2E2 0.14 Pf6N2E2_477 Branched-chain amino acid aminotransferase (EC 2.6.1.42) 0.46 Pf6N2E2_4606 Aspartate carbamoyltransferase (EC 2.1.3.2) — —
Pseudomonas fluorescens FW300-N1B4 0.14 Pf1N1B4_4476 Branched-chain amino acid aminotransferase (EC 2.6.1.42) 0.46 Pf1N1B4_2347 Aspartate carbamoyltransferase (EC 2.1.3.2) — —
Pseudomonas sp. RS175 0.14 PFR28_02449 putative branched-chain-amino-acid aminotransferase 0.45 PFR28_04237 Aspartate carbamoyltransferase — —
Ralstonia sp. UNC404CL21Col 0.14 ABZR87_RS18540 branched-chain amino acid aminotransferase 0.45 ABZR87_RS08625 aspartate carbamoyltransferase catalytic subunit low > 80
Alteromonas macleodii MIT1002 0.14 MIT1002_00377 Branched-chain-amino-acid aminotransferase 2 0.20 MIT1002_00423 Aspartate carbamoyltransferase catalytic chain 0.85 56
Mycobacterium tuberculosis H37Rv 0.13 Rv2210c Branched-chain amino acid transaminase IlvE 0.41 Rv1380 Probable aspartate carbamoyltransferase PyrB (ATCase) (aspartate transcarbamylase) — —
Bifidobacterium breve UCC2003 0.12 BBR_RS15210 branched-chain amino acid aminotransferase 0.22 BBR_RS15425 aspartate carbamoyltransferase low > 34
Shewanella sp. ANA-3 0.11 Shewana3_3830 branched-chain amino acid aminotransferase (RefSeq) 0.19 Shewana3_3070 aspartate carbamoyltransferase (RefSeq) 0.79 53
Shewanella oneidensis MR-1 0.11 SO0340 ilvE branched-chain amino acid aminotransferase (NCBI ptt file) 0.19 SO1301 pyrB aspartate carbamoyltransferase (NCBI ptt file) 0.76 73
Shewanella amazonensis SB2B 0.10 Sama_3299 branched-chain amino acid aminotransferase (RefSeq) 0.18 Sama_0840 aspartate carbamoyltransferase (RefSeq) low > 62

Not shown: 1 genomes with orthologs for PGA1_c34110 only; 19 genomes with orthologs for PGA1_c03060 only