Conservation of cofitness between PS417_27810 and PS417_14035 in Pseudomonas simiae WCS417

85 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_27810 ribonuclease PH 1.0 PS417_14035 lactoylglutathione lyase 0.30 12
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS29490 ribonuclease PH 0.99 PFLU_RS14580 lactoylglutathione lyase low > 109
Pseudomonas fluorescens SBW25 1.00 PFLU_RS29490 ribonuclease PH 0.99 PFLU_RS14580 lactoylglutathione lyase low > 109
Pseudomonas syringae pv. syringae B728a 0.97 Psyr_0213 RNAse PH 0.86 Psyr_2973 Glyoxalase I low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.97 Psyr_0213 RNAse PH 0.86 Psyr_2973 Glyoxalase I low > 86
Pseudomonas fluorescens FW300-N1B4 0.97 Pf1N1B4_2117 Ribonuclease PH (EC 2.7.7.56) 0.96 Pf1N1B4_5009 Lactoylglutathione lyase (EC 4.4.1.5) — —
Pseudomonas fluorescens FW300-N2C3 0.97 AO356_12500 ribonuclease PH 0.95 AO356_22815 lactoylglutathione lyase low > 104
Pseudomonas fluorescens FW300-N2E2 0.97 Pf6N2E2_4365 Ribonuclease PH (EC 2.7.7.56) 0.94 Pf6N2E2_449 Lactoylglutathione lyase (EC 4.4.1.5) low > 103
Pseudomonas fluorescens FW300-N2E3 0.97 AO353_09260 ribonuclease PH 0.96 AO353_26955 lactoylglutathione lyase low > 101
Pseudomonas sp. RS175 0.97 PFR28_04420 Ribonuclease PH 0.93 PFR28_02480 Lactoylglutathione lyase low > 88
Pseudomonas putida KT2440 0.95 PP_5294 Ribonuclease PH 0.83 PP_3766 Lactoylglutathione lyase low > 96
Pseudomonas fluorescens GW456-L13 0.94 PfGW456L13_784 Ribonuclease PH (EC 2.7.7.56) 0.96 PfGW456L13_2929 Lactoylglutathione lyase (EC 4.4.1.5) low > 87
Pseudomonas stutzeri RCH2 0.92 Psest_3813 ribonuclease PH 0.26 Psest_3120 lactoylglutathione lyase low > 67
Pseudomonas sp. S08-1 0.91 OH686_13570 ribonuclease PH 0.24 OH686_03925 lactoylglutathione lyase low > 80
Marinobacter adhaerens HP15 0.70 HP15_300 ribonuclease PH 0.55 HP15_2890 lactoylglutathione lyase low > 73
Kangiella aquimarina DSM 16071 0.70 B158DRAFT_0588 ribonuclease PH 0.24 B158DRAFT_1242 lactoylglutathione lyase low > 40
Dickeya dadantii 3937 0.69 DDA3937_RS20540 ribonuclease PH 0.25 DDA3937_RS12600 lactoylglutathione lyase low > 74
Alteromonas macleodii MIT1002 0.68 MIT1002_04071 Ribonuclease PH 0.48 MIT1002_02929 Lactoylglutathione lyase low > 70
Xanthomonas campestris pv. campestris strain 8004 0.68 Xcc-8004.1221.1 Ribonuclease PH (EC 2.7.7.56) 0.66 Xcc-8004.4545.1 Lactoylglutathione lyase (EC 4.4.1.5) low > 74
Dickeya dianthicola 67-19 0.68 HGI48_RS00675 ribonuclease PH 0.24 HGI48_RS12660 lactoylglutathione lyase low > 71
Dickeya dianthicola ME23 0.68 DZA65_RS00730 ribonuclease PH 0.24 DZA65_RS13115 lactoylglutathione lyase low > 75
Acinetobacter radioresistens SK82 0.66 MPMX26_00040 Ribonuclease PH 0.26 MPMX26_01061 Lactoylglutathione lyase low > 36
Serratia liquefaciens MT49 0.66 IAI46_24850 ribonuclease PH 0.66 IAI46_13865 lactoylglutathione lyase low > 86
Shewanella loihica PV-4 0.66 Shew_3488 ribonuclease PH (RefSeq) 0.21 Shew_2073 lactoylglutathione lyase (RefSeq) low > 60
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.66 GFF366 Ribonuclease PH (EC 2.7.7.56) 0.23 GFF3623 Lactoylglutathione lyase (EC 4.4.1.5) low > 78
Escherichia coli ECRC102 0.66 NIAGMN_13350 rph ribonuclease PH 0.22 NIAGMN_00635 Lactoylglutathione lyase — —
Rahnella sp. WP5 0.66 EX31_RS14505 ribonuclease PH 0.19 EX31_RS13810 lactoylglutathione lyase low > 89
Shewanella amazonensis SB2B 0.66 Sama_0320 tRNA nucleotidyltransferase (RefSeq) 0.21 Sama_1837 lactoylglutathione lyase (RefSeq) low > 62
Escherichia coli ECOR27 0.66 NOLOHH_07470 rph ribonuclease PH 0.22 NOLOHH_17950 Lactoylglutathione lyase — —
Escherichia fergusonii Becca 0.66 EFB2_00170 Ribonuclease PH 0.22 EFB2_02341 Lactoylglutathione lyase low > 86
Escherichia coli ECRC101 0.66 MCAODC_06100 rph ribonuclease PH 0.22 MCAODC_17980 Lactoylglutathione lyase — —
Escherichia coli ECRC101 0.66 OKFHMN_15590 rph ribonuclease PH 0.22 OKFHMN_27430 Lactoylglutathione lyase — —
Escherichia coli Nissle 1917 0.66 ECOLIN_RS20755 ribonuclease PH 0.22 ECOLIN_RS09205 lactoylglutathione lyase — —
Escherichia coli ECRC99 0.66 KEDOAH_12555 rph ribonuclease PH 0.22 KEDOAH_00680 Lactoylglutathione lyase — —
Escherichia coli ECRC98 0.66 JDDGAC_19215 rph ribonuclease PH 0.22 JDDGAC_02020 Lactoylglutathione lyase — —
Escherichia coli ECOR38 0.66 HEPCGN_14410 rph ribonuclease PH 0.22 HEPCGN_05815 Lactoylglutathione lyase low > 85
Escherichia coli BL21 0.66 ECD_03500 ribonuclease PH 0.22 ECD_01621 glyoxalase I, Ni-dependent low > 60
Enterobacter asburiae PDN3 0.66 EX28DRAFT_3893 ribonuclease PH 0.22 EX28DRAFT_1649 lactoylglutathione lyase low > 76
Enterobacter sp. TBS_079 0.66 MPMX20_00092 Ribonuclease PH 0.22 MPMX20_01985 Lactoylglutathione lyase low > 85
Escherichia coli ECRC62 0.66 BNILDI_04045 rph ribonuclease PH 0.22 BNILDI_16740 Lactoylglutathione lyase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.66 OHPLBJKB_00059 Ribonuclease PH 0.22 OHPLBJKB_02074 Lactoylglutathione lyase low > 73
Shewanella sp. ANA-3 0.65 Shewana3_3777 RNAse PH (RefSeq) 0.23 Shewana3_2232 lactoylglutathione lyase (RefSeq) — —
Shewanella oneidensis MR-1 0.65 SO4256 rph ribonuclease PH (NCBI ptt file) 0.23 SO2044 gloA lactoylglutathione lyase (NCBI ptt file) low > 76
Paraburkholderia sabiae LMG 24235 0.65 QEN71_RS03645 ribonuclease PH 0.23 QEN71_RS02140 lactoylglutathione lyase low > 153
Klebsiella michiganensis M5al 0.65 BWI76_RS27390 ribonuclease PH 0.22 BWI76_RS16480 lactoylglutathione lyase low > 92
Pectobacterium carotovorum WPP14 0.65 HER17_RS20855 ribonuclease PH 0.24 HER17_RS09260 lactoylglutathione lyase low > 75
Pantoea sp. MT58 0.65 IAI47_00595 ribonuclease PH 0.24 IAI47_10770 lactoylglutathione lyase low > 76
Herbaspirillum seropedicae SmR1 0.65 HSERO_RS10655 ribonuclease PH 0.24 HSERO_RS03550 glyoxalase I low > 78
Erwinia tracheiphila SCR3 0.65 LU632_RS22020 rph ribonuclease PH 0.23 LU632_RS11225 gloA lactoylglutathione lyase low > 74
Dyella japonica UNC79MFTsu3.2 0.64 ABZR86_RS11900 ribonuclease PH 0.16 ABZR86_RS17390 VOC family protein low > 74
Burkholderia phytofirmans PsJN 0.64 BPHYT_RS15325 ribonuclease PH 0.22 BPHYT_RS03320 lactoylglutathione lyase low > 109
Escherichia coli BW25113 0.64 b3643 rph ribonuclease PH (NCBI) 0.22 b1651 gloA glyoxalase I, Ni-dependent (NCBI) low > 76
Paraburkholderia graminis OAS925 0.64 ABIE53_003234 ribonuclease PH 0.24 ABIE53_000803 lactoylglutathione lyase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.64 H281DRAFT_04008 RNAse PH 0.24 H281DRAFT_04643 methylmalonyl-CoA epimerase low > 103
Dechlorosoma suillum PS 0.64 Dsui_0494 ribonuclease PH 0.21 Dsui_1204 lactoylglutathione lyase low > 51
Lysobacter sp. OAE881 0.63 ABIE51_RS17285 ribonuclease PH 0.71 ABIE51_RS04905 lactoylglutathione lyase low > 62
Ralstonia solanacearum UW163 0.63 UW163_RS10375 ribonuclease PH 0.23 UW163_RS01820 lactoylglutathione lyase — —
Ralstonia solanacearum IBSBF1503 0.63 RALBFv3_RS03345 ribonuclease PH 0.23 RALBFv3_RS11765 lactoylglutathione lyase low > 76
Vibrio cholerae E7946 ATCC 55056 0.63 CSW01_01115 ribonuclease PH 0.26 CSW01_05140 lactoylglutathione lyase low > 62
Ralstonia solanacearum PSI07 0.63 RPSI07_RS13840 ribonuclease PH 0.23 RPSI07_RS21450 lactoylglutathione lyase — —
Ralstonia sp. UNC404CL21Col 0.63 ABZR87_RS15255 ribonuclease PH 0.22 ABZR87_RS07720 lactoylglutathione lyase low > 80
Rhizobium sp. OAE497 0.62 ABIE40_RS01640 ribonuclease PH 0.21 ABIE40_RS08735 lactoylglutathione lyase low > 107
Ralstonia solanacearum GMI1000 0.62 RS_RS10830 ribonuclease PH 0.23 RS_RS02590 lactoylglutathione lyase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.62 GFF3254 Ribonuclease PH (EC 2.7.7.56) 0.25 GFF3511 Lactoylglutathione lyase (EC 4.4.1.5) low > 90
Cupriavidus basilensis FW507-4G11 0.62 RR42_RS04890 ribonuclease PH 0.24 RR42_RS02800 glyoxalase I low > 128
Rhodanobacter denitrificans FW104-10B01 0.62 LRK54_RS11745 ribonuclease PH 0.22 LRK54_RS06585 VOC family protein low > 59
Rhodanobacter denitrificans MT42 0.62 LRK55_RS11470 ribonuclease PH 0.22 LRK55_RS06330 VOC family protein low > 63
Sinorhizobium meliloti 1021 0.62 SMc01144 ribonuclease PH 0.18 SMc00290 lactoylglutathione lyase low > 103
Rhodanobacter sp. FW510-T8 0.62 OKGIIK_12150 rph ribonuclease PH 0.24 OKGIIK_17075 gloA lactoylglutathione lyase — —
Variovorax sp. SCN45 0.61 GFF2381 Ribonuclease PH (EC 2.7.7.56) 0.72 GFF7483 Lactoylglutathione lyase (EC 4.4.1.5) — —
Agrobacterium fabrum C58 0.61 Atu0327 ribonuclease PH 0.19 Atu1802 lactoylglutathione lyase — —
Variovorax sp. OAS795 0.60 ABID97_RS23640 ribonuclease PH 0.25 ABID97_RS21275 lactoylglutathione lyase low > 91
Bosea sp. OAE506 0.59 ABIE41_RS03295 ribonuclease PH 0.19 ABIE41_RS21410 VOC family protein low > 77
Rhodospirillum rubrum S1H 0.59 Rru_A3641 Ribonuclease PH (NCBI) 0.21 Rru_A2466 Glyoxalase/bleomycin resistance protein/dioxygenase (NCBI) low > 58
Azospirillum brasilense Sp245 0.58 AZOBR_RS02205 ribonuclease PH 0.24 AZOBR_RS07390 glyoxalase I low > 97
Castellaniella sp019104865 MT123 0.58 ABCV34_RS03515 ribonuclease PH 0.22 ABCV34_RS09485 lactoylglutathione lyase low > 48
Acidovorax sp. GW101-3H11 0.58 Ac3H11_3670 Ribonuclease PH (EC 2.7.7.56) 0.24 Ac3H11_2251 Lactoylglutathione lyase (EC 4.4.1.5) low > 79
Dinoroseobacter shibae DFL-12 0.56 Dshi_3463 ribonuclease PH (RefSeq) 0.19 Dshi_0767 Glyoxalase/bleomycin resistance protein/dioxygenase (RefSeq) low > 64
Azospirillum sp. SherDot2 0.56 MPMX19_02576 Ribonuclease PH 0.25 MPMX19_01003 Lactoylglutathione lyase low > 112
Phaeobacter inhibens DSM 17395 0.55 PGA1_c35030 ribonuclease PH 0.18 PGA1_c21210 putative lactoylglutathione lyase low > 62
Brevundimonas sp. GW460-12-10-14-LB2 0.54 A4249_RS13125 ribonuclease PH 0.20 A4249_RS13830 VOC family protein low > 48
Magnetospirillum magneticum AMB-1 0.54 AMB_RS22760 ribonuclease PH 0.25 AMB_RS12480 lactoylglutathione lyase low > 64
Caulobacter crescentus NA1000 Δfur 0.52 CCNA_00151 ribonuclease PH 0.18 CCNA_01375 lactoylglutathione lyase low > 67
Caulobacter crescentus NA1000 0.52 CCNA_00151 ribonuclease PH 0.18 CCNA_01375 lactoylglutathione lyase low > 66
Sphingomonas koreensis DSMZ 15582 0.49 Ga0059261_2741 ribonuclease PH 0.17 Ga0059261_2761 Lactoylglutathione lyase and related lyases — —
Synechococcus elongatus PCC 7942 0.49 Synpcc7942_1073 rph ribonuclease PH 0.25 Synpcc7942_0638 gloA Glyoxalase I low > 38

Not shown: 3 genomes with orthologs for PS417_27810 only; 0 genomes with orthologs for PS417_14035 only