Conservation of cofitness between GFF1668 and GFF1665 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

80 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF1668 Positive regulator of CheA protein activity (CheW) 1.0 GFF1665 Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) 0.48 4
Enterobacter asburiae PDN3 0.96 EX28DRAFT_0663 Chemotaxis signal transduction protein 0.94 EX28DRAFT_0672 Methylase of chemotaxis methyl-accepting proteins 0.58 20
Enterobacter sp. TBS_079 0.94 MPMX20_02797 Chemotaxis protein CheW 0.94 MPMX20_02788 Chemotaxis protein methyltransferase 0.83 1
Escherichia coli ECRC102 0.92 NIAGMN_01935 cheW chemotaxis protein CheW 0.89 NIAGMN_01915 cheR protein-glutamate O-methyltransferase CheR — —
Escherichia coli BW25113 0.92 b1887 cheW purine-binding chemotaxis protein (NCBI) 0.88 b1884 cheR chemotaxis regulator, protein-glutamate methyltransferase (NCBI) 0.45 30
Escherichia coli ECRC101 0.92 MCAODC_19280 cheW chemotaxis protein CheW 0.89 MCAODC_19260 cheR protein-glutamate O-methyltransferase CheR low > 87
Escherichia coli ECRC62 0.92 BNILDI_15355 cheW chemotaxis protein CheW 0.88 BNILDI_15375 cheR protein-glutamate O-methyltransferase CheR low > 75
Escherichia coli ECRC99 0.92 KEDOAH_01980 cheW chemotaxis protein CheW 0.89 KEDOAH_01960 cheR protein-glutamate O-methyltransferase CheR — —
Escherichia fergusonii Becca 0.92 EFB2_02056 Chemotaxis protein CheW 0.88 EFB2_02059 Chemotaxis protein methyltransferase 0.35 33
Escherichia coli ECOR38 0.92 HEPCGN_04545 cheW chemotaxis protein CheW 0.88 HEPCGN_04565 cheR protein-glutamate O-methyltransferase CheR low > 87
Escherichia coli ECRC100 0.92 OKFHMN_26125 cheW chemotaxis protein CheW 0.89 OKFHMN_26145 cheR protein-glutamate O-methyltransferase CheR low > 80
Escherichia coli BL21 0.92 ECD_01858 purine-binding chemotaxis protein 0.88 ECD_01855 chemotaxis regulator, protein-glutamate methyltransferase — —
Escherichia coli ECOR27 0.92 NOLOHH_16565 cheW chemotaxis protein CheW 0.88 NOLOHH_16585 cheR protein-glutamate O-methyltransferase CheR low > 75
Escherichia coli Nissle 1917 0.92 ECOLIN_RS10775 chemotaxis protein CheW 0.88 ECOLIN_RS10760 protein-glutamate O-methyltransferase CheR — —
Escherichia coli ECRC98 0.92 JDDGAC_00700 cheW chemotaxis protein CheW 0.89 JDDGAC_00720 cheR protein-glutamate O-methyltransferase CheR low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.92 OHPLBJKB_01841 Chemotaxis protein CheW 0.88 OHPLBJKB_01844 Chemotaxis protein methyltransferase low > 73
Dickeya dianthicola 67-19 0.86 HGI48_RS13585 chemotaxis protein CheW 0.71 HGI48_RS13575 protein-glutamate O-methyltransferase CheR low > 71
Dickeya dadantii 3937 0.86 DDA3937_RS13540 chemotaxis protein CheW 0.70 DDA3937_RS13530 protein-glutamate O-methyltransferase CheR 0.96 2
Dickeya dianthicola ME23 0.86 DZA65_RS14070 chemotaxis protein CheW 0.71 DZA65_RS14060 protein-glutamate O-methyltransferase CheR 0.97 2
Pectobacterium carotovorum WPP14 0.86 HER17_RS08105 chemotaxis protein CheW 0.70 HER17_RS08115 protein-glutamate O-methyltransferase CheR 0.96 2
Serratia liquefaciens MT49 0.86 IAI46_16035 chemotaxis protein CheW 0.67 IAI46_16020 protein-glutamate O-methyltransferase CheR low > 86
Erwinia tracheiphila SCR3 0.83 LU632_RS13555 cheW chemotaxis protein CheW 0.74 LU632_RS13530 cheR protein-glutamate O-methyltransferase CheR low > 74
Pantoea sp. MT58 0.81 IAI47_08305 chemotaxis protein CheW 0.74 IAI47_08325 protein-glutamate O-methyltransferase CheR 0.62 2
Rahnella sp. WP5 0.80 EX31_RS11400 chemotaxis protein CheW 0.73 EX31_RS11365 protein-glutamate O-methyltransferase CheR 0.54 14
Cupriavidus basilensis FW507-4G11 0.68 RR42_RS35800 chemotaxis protein CheW 0.56 RR42_RS35795 chemotaxis protein CheR low > 128
Burkholderia phytofirmans PsJN 0.67 BPHYT_RS18995 purine-binding chemotaxis protein 0.55 BPHYT_RS18980 chemotaxis protein CheR 0.84 2
Paraburkholderia graminis OAS925 0.67 ABIE53_000124 purine-binding chemotaxis protein CheW 0.52 ABIE53_000121 chemotaxis protein methyltransferase CheR 0.83 2
Paraburkholderia bryophila 376MFSha3.1 0.67 H281DRAFT_05743 CheW protein 0.53 H281DRAFT_05745 MCP methyltransferase, CheR-type 0.49 2
Paraburkholderia sabiae LMG 24235 0.66 QEN71_RS29005 chemotaxis protein CheW 0.53 QEN71_RS28995 CheR family methyltransferase 0.99 1
Ralstonia solanacearum PSI07 0.64 RPSI07_RS06250 chemotaxis protein CheW 0.52 RPSI07_RS06240 chemotaxis protein CheR low > 81
Ralstonia solanacearum UW163 0.64 UW163_RS21755 chemotaxis protein CheW 0.52 UW163_RS21745 chemotaxis protein CheR — —
Ralstonia solanacearum IBSBF1503 0.64 RALBFv3_RS17395 chemotaxis protein CheW 0.52 RALBFv3_RS17405 chemotaxis protein CheR 0.42 10
Ralstonia solanacearum GMI1000 0.64 RS_RS23915 chemotaxis protein CheW 0.51 RS_RS23905 chemotaxis protein CheR 0.50 5
Ralstonia sp. UNC404CL21Col 0.63 ABZR87_RS17965 chemotaxis protein CheW 0.51 ABZR87_RS17980 CheR family methyltransferase 0.31 21
Herbaspirillum seropedicae SmR1 0.62 HSERO_RS14950 purine-binding chemotaxis protein 0.50 HSERO_RS10115 chemotaxis protein CheR 0.75 1
Variovorax sp. SCN45 0.59 GFF5730 Positive regulator of CheA protein activity (CheW) 0.52 GFF5765 Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) — —
Dechlorosoma suillum PS 0.57 Dsui_1709 chemotaxis signal transduction protein 0.49 Dsui_1711 methylase of chemotaxis methyl-accepting protein low > 51
Acidovorax sp. GW101-3H11 0.54 Ac3H11_1422 Positive regulator of CheA protein activity (CheW) 0.46 Ac3H11_1423 Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) 0.91 2
Hydrogenophaga sp. GW460-11-11-14-LB1 0.54 GFF2450 Positive regulator of CheA protein activity (CheW) 0.46 GFF1477 Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) low > 90
Castellaniella sp019104865 MT123 0.54 ABCV34_RS05830 chemotaxis protein CheW 0.45 ABCV34_RS05820 CheR family methyltransferase low > 48
Shewanella oneidensis MR-1 0.54 SO2122 cheW-1 purine-binding chemotaxis protein CheW (NCBI ptt file) 0.40 SO2124 cheR-1 chemotaxis protein methyltransferase CheR (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.53 Shewana3_2217 CheW protein (RefSeq) 0.41 Shewana3_2215 MCP methyltransferase, CheR-type (RefSeq) low > 73
Xanthomonas campestris pv. campestris strain 8004 0.52 Xcc-8004.2882.1 Positive regulator of CheA protein activity (CheW) 0.46 Xcc-8004.2886.1 Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) low > 74
Lysobacter sp. OAE881 0.50 ABIE51_RS16920 chemotaxis protein CheW 0.45 ABIE51_RS16950 CheR family methyltransferase low > 62
Shewanella loihica PV-4 0.41 Shew_0112 CheW protein (RefSeq) 0.38 Shew_0110 MCP methyltransferase, CheR-type (RefSeq) low > 60
Rhodanobacter sp. FW510-T8 0.40 OKGIIK_02895 Chemotaxis protein CheW 0.32 OKGIIK_02905 Chemotaxis protein methyltransferase low > 52
Shewanella amazonensis SB2B 0.39 Sama_3496 biotin synthase (RefSeq) 0.33 Sama_3498 protein-glutamate O-methyltransferase (RefSeq) low > 62
Rhodanobacter denitrificans MT42 0.39 LRK55_RS13390 chemotaxis protein CheW 0.36 LRK55_RS13400 protein-glutamate O-methyltransferase low > 63
Rhodanobacter denitrificans FW104-10B01 0.39 LRK54_RS13650 chemotaxis protein CheW 0.36 LRK54_RS13660 protein-glutamate O-methyltransferase low > 59
Azospirillum sp. SherDot2 0.38 MPMX19_01949 Chemotaxis protein CheW 0.32 MPMX19_01951 Chemotaxis protein methyltransferase 0.63 37
Dyella japonica UNC79MFTsu3.2 0.36 ABZR86_RS22225 chemotaxis protein CheW 0.31 ABZR86_RS22215 protein-glutamate O-methyltransferase CheR low > 74
Vibrio cholerae E7946 ATCC 55056 0.34 CSW01_19540 chemotaxis protein CheW 0.34 CSW01_19530 Chemotaxis protein methyltransferase 3 low > 62
Rhizobium sp. OAE497 0.34 ABIE40_RS02880 chemotaxis protein CheW 0.29 ABIE40_RS02885 protein-glutamate O-methyltransferase CheR low > 107
Desulfovibrio vulgaris Miyazaki F 0.33 DvMF_0284 CheW protein (RefSeq) 0.26 DvMF_0466 MCP methyltransferase, CheR-type (RefSeq) — —
Sinorhizobium meliloti 1021 0.33 SMc03008 chemotaxis protein 0.28 SMc03009 chemotaxis protein methyltransferase low > 103
Desulfovibrio vulgaris Hildenborough JW710 0.33 DVU1904 cheW-2 chemotaxis protein CheW (TIGR) 0.29 DVU1595 cheR-1 chemotaxis protein methyltransferase (TIGR) low > 55
Pseudomonas fluorescens FW300-N2E2 0.33 Pf6N2E2_1778 Positive regulator of CheA protein activity (CheW) 0.35 Pf6N2E2_415 Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) low > 103
Pseudomonas fluorescens FW300-N2C3 0.32 AO356_29855 hypothetical protein 0.35 AO356_22655 SAM-dependent methyltransferase low > 104
Caulobacter crescentus NA1000 0.32 CCNA_00443 chemotaxis protein cheW 0.33 CCNA_00444 chemotaxis protein methyltransferase 0.94 9
Brevundimonas sp. GW460-12-10-14-LB2 0.32 A4249_RS15570 chemotaxis protein CheW 0.29 A4249_RS15575 protein-glutamate O-methyltransferase low > 48
Caulobacter crescentus NA1000 Δfur 0.32 CCNA_00443 chemotaxis protein cheW 0.33 CCNA_00444 chemotaxis protein methyltransferase low > 67
Pseudomonas syringae pv. syringae B728a ΔmexB 0.31 Psyr_3428 CheW-like protein 0.33 Psyr_0783 MCP methyltransferase, CheR-type low > 86
Pseudomonas syringae pv. syringae B728a 0.31 Psyr_3428 CheW-like protein 0.33 Psyr_0783 MCP methyltransferase, CheR-type low > 86
Pseudomonas fluorescens FW300-N2E3 0.30 AO353_18830 chemotaxis protein CheW 0.23 AO353_02865 chemotaxis protein 0.62 14
Agrobacterium fabrum C58 0.30 Atu2075 chemotaxis protein 0.29 Atu0518 chemotaxis methyltransferase 0.27 3
Pseudomonas putida KT2440 0.30 PP_4332 Chemotaxis protein CheW 0.22 PP_4392 chemotaxis protein methyltransferase 0.55 5
Pseudomonas sp. RS175 0.30 PFR28_01431 Chemotaxis protein CheW 0.33 PFR28_02515 Chemotaxis protein methyltransferase low > 88
Pseudomonas simiae WCS417 0.30 PS417_19650 chemotaxis protein CheW 0.22 PS417_21575 chemotaxis protein 0.92 3
Alteromonas macleodii MIT1002 0.30 MIT1002_01110 Chemotaxis protein CheW 0.24 MIT1002_01038 Chemotaxis protein methyltransferase low > 70
Pseudomonas stutzeri RCH2 0.30 Psest_1749 Chemotaxis signal transduction protein 0.32 Psest_0654 Methylase of chemotaxis methyl-accepting proteins low > 67
Pseudomonas fluorescens SBW25-INTG 0.29 PFLU_RS24980 purine-binding chemotaxis protein CheW 0.34 PFLU_RS24975 SAM-dependent methyltransferase 0.14 33
Pseudomonas fluorescens SBW25 0.29 PFLU_RS24980 purine-binding chemotaxis protein CheW 0.34 PFLU_RS24975 SAM-dependent methyltransferase low > 109
Pseudomonas fluorescens GW456-L13 0.29 PfGW456L13_4321 Positive regulator of CheA protein activity (CheW) 0.22 PfGW456L13_2000 Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) low > 87
Pseudomonas fluorescens FW300-N1B4 0.29 Pf1N1B4_3635 Positive regulator of CheA protein activity (CheW) 0.22 Pf1N1B4_3471 Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) — —
Marinobacter adhaerens HP15 0.29 HP15_2292 purine-binding chemotaxis protein CheW 0.24 HP15_1548 chemotaxis protein methyltransferase CheR low > 73
Methanococcus maripaludis S2 0.28 MMP_RS04800 chemotaxis protein CheW 0.19 MMP_RS04825 protein-glutamate O-methyltransferase CheR low > 25
Methanococcus maripaludis JJ 0.28 MMJJ_RS00335 chemotaxis protein CheW 0.19 MMJJ_RS00310 protein-glutamate O-methyltransferase CheR low > 28
Pseudomonas sp. S08-1 0.28 OH686_02685 Positive regulator of CheA protein activity (CheW) 0.33 OH686_21845 Chemotaxis protein methyltransferase CheR low > 80
Phaeobacter inhibens DSM 17395 0.26 PGA1_262p02110 putative chemotaxis protein CheW 0.27 PGA1_262p02100 methyltransferase, cheR type low > 62
Sphingomonas koreensis DSMZ 15582 0.25 Ga0059261_1119 Chemotaxis signal transduction protein 0.29 Ga0059261_1083 Methylase of chemotaxis methyl-accepting proteins low > 68
Rhodopseudomonas palustris CGA009 0.21 TX73_000720 chemotaxis protein CheW 0.26 TX73_000710 methyltransferase domain-containing protein low > 86

Not shown: 1 genomes with orthologs for GFF1668 only; 5 genomes with orthologs for GFF1665 only