| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Escherichia coli BL21 | 1.0 | ECD_00354 | | tRNA-guanine transglycosylase | 1.0 | ECD_03817 | | peptidase component of the HslUV protease | 0.64 | 7 |
| Escherichia coli ECOR38 | 1.00 | HEPCGN_07145 | tgt | tRNA guanosine(34) transglycosylase Tgt | 0.99 | HEPCGN_12380 | hslV | ATP-dependent protease subunit HslV | low | > 87 |
| Escherichia coli ECRC101 | 1.00 | MCAODC_27730 | tgt | tRNA guanosine(34) transglycosylase Tgt | 0.99 | MCAODC_04235 | hslV | ATP-dependent protease subunit HslV | low | > 87 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 1.00 | OHPLBJKB_03270 | | Queuine tRNA-ribosyltransferase | 1.00 | OHPLBJKB_04119 | | ATP-dependent protease subunit HslV | low | > 73 |
| Escherichia fergusonii Becca | 1.00 | EFB2_03651 | | Queuine tRNA-ribosyltransferase | 1.00 | EFB2_04686 | | ATP-dependent protease subunit HslV | low | > 86 |
| Escherichia coli ECOR27 | 1.00 | NOLOHH_01440 | tgt | tRNA guanosine(34) transglycosylase Tgt | 0.99 | NOLOHH_05880 | hslV | ATP-dependent protease subunit HslV | low | > 75 |
| Escherichia coli ECRC102 | 1.00 | NIAGMN_06560 | tgt | tRNA guanosine(34) transglycosylase Tgt | 0.99 | NIAGMN_11490 | hslV | ATP-dependent protease subunit HslV | — | — |
| Escherichia coli Nissle 1917 | 1.00 | ECOLIN_RS02445 | | tRNA guanosine(34) transglycosylase Tgt | 1.00 | ECOLIN_RS22640 | | ATP-dependent protease subunit HslV | — | — |
| Escherichia coli ECRC99 | 1.00 | KEDOAH_19460 | tgt | tRNA guanosine(34) transglycosylase Tgt | 0.99 | KEDOAH_14425 | hslV | ATP-dependent protease subunit HslV | — | — |
| Escherichia coli ECRC100 | 1.00 | OKFHMN_08505 | tgt | tRNA guanosine(34) transglycosylase Tgt | 0.99 | OKFHMN_13735 | hslV | ATP-dependent protease subunit HslV | low | > 80 |
| Escherichia coli BW25113 | 1.00 | b0406 | tgt | queuine tRNA-ribosyltransferase (NCBI) | 1.00 | b3932 | hslV | ATP-dependent protease peptidase subunit (NCBI) | low | > 76 |
| Escherichia coli ECRC62 | 1.00 | BNILDI_22855 | tgt | tRNA guanosine(34) transglycosylase Tgt | 0.99 | BNILDI_05650 | hslV | ATP-dependent protease subunit HslV | low | > 75 |
| Escherichia coli ECRC98 | 1.00 | JDDGAC_12160 | tgt | tRNA guanosine(34) transglycosylase Tgt | 0.99 | JDDGAC_17360 | hslV | ATP-dependent protease subunit HslV | low | > 86 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.98 | GFF4305 | | tRNA-guanine transglycosylase (EC 2.4.2.29) | 0.83 | GFF2314 | | ATP-dependent protease HslV (EC 3.4.25.-) | low | > 78 |
| Enterobacter sp. TBS_079 | 0.98 | MPMX20_00997 | | Queuine tRNA-ribosyltransferase | 0.95 | MPMX20_04537 | | ATP-dependent protease subunit HslV | low | > 85 |
| Enterobacter asburiae PDN3 | 0.98 | EX28DRAFT_2565 | | tRNA-guanine transglycosylase | 0.96 | EX28DRAFT_4405 | | ATP-dependent protease HslVU, peptidase subunit | low | > 76 |
| Klebsiella michiganensis M5al | 0.98 | BWI76_RS06300 | | tRNA guanosine(34) transglycosylase Tgt | 0.96 | BWI76_RS00755 | | ATP-dependent protease subunit HslV | — | — |
| Pantoea sp. MT58 | 0.95 | IAI47_14805 | | tRNA guanosine(34) transglycosylase Tgt | 0.91 | IAI47_00850 | | ATP-dependent protease subunit HslV | low | > 76 |
| Dickeya dadantii 3937 | 0.92 | DDA3937_RS05470 | | tRNA guanosine(34) transglycosylase Tgt | 0.93 | DDA3937_RS00920 | | ATP-dependent protease subunit HslV | low | > 74 |
| Dickeya dianthicola ME23 | 0.92 | DZA65_RS05855 | | tRNA guanosine(34) transglycosylase Tgt | 0.93 | DZA65_RS21500 | | ATP-dependent protease subunit HslV | low | > 75 |
| Pectobacterium carotovorum WPP14 | 0.92 | HER17_RS15990 | | tRNA guanosine(34) transglycosylase Tgt | 0.92 | HER17_RS00855 | | ATP-dependent protease subunit HslV | low | > 75 |
| Dickeya dianthicola 67-19 | 0.92 | HGI48_RS05530 | | tRNA guanosine(34) transglycosylase Tgt | 0.93 | HGI48_RS20455 | | ATP-dependent protease subunit HslV | low | > 71 |
| Rahnella sp. WP5 | 0.91 | EX31_RS22095 | | tRNA guanosine(34) transglycosylase Tgt | 0.93 | EX31_RS14240 | | ATP-dependent protease subunit HslV | low | > 89 |
| Serratia liquefaciens MT49 | 0.91 | IAI46_04840 | | tRNA guanosine(34) transglycosylase Tgt | 0.95 | IAI46_24570 | | ATP-dependent protease subunit HslV | low | > 86 |
| Erwinia tracheiphila SCR3 | 0.91 | LU632_RS18500 | tgt | tRNA guanosine(34) transglycosylase Tgt | 0.93 | LU632_RS19670 | hslV | ATP-dependent protease subunit HslV | low | > 74 |
| Shewanella sp. ANA-3 | 0.85 | Shewana3_1435 | tgt | queuine tRNA-ribosyltransferase (RefSeq) | 0.78 | Shewana3_3699 | | ATP-dependent protease peptidase subunit (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.85 | SO3113 | tgt | queuine tRNA-ribosyltransferase (NCBI ptt file) | 0.78 | SO4162 | hslV | ATP-dependent protease HslV (NCBI ptt file) | low | > 76 |
| Vibrio cholerae E7946 ATCC 55056 | 0.85 | CSW01_03850 | | tRNA guanosine(34) transglycosylase Tgt | 0.84 | CSW01_13515 | | HslU--HslV peptidase proteolytic subunit | low | > 62 |
| Shewanella amazonensis SB2B | 0.85 | Sama_2193 | tgt | queuine tRNA-ribosyltransferase (RefSeq) | 0.83 | Sama_0441 | | ATP-dependent protease peptidase subunit (RefSeq) | low | > 62 |
| Shewanella loihica PV-4 | 0.84 | Shew_2337 | tgt | queuine tRNA-ribosyltransferase (RefSeq) | 0.83 | Shew_0375 | | ATP-dependent protease peptidase subunit (RefSeq) | — | — |
| Alteromonas macleodii MIT1002 | 0.76 | MIT1002_02813 | | Queuine tRNA-ribosyltransferase | 0.77 | MIT1002_03660 | | ATP-dependent protease subunit HslV | low | > 70 |
| Pseudomonas sp. S08-1 | 0.74 | OH686_17430 | | tRNA-guanine transglycosylase | 0.69 | OH686_10095 | | ATP-dependent protease HslVU, peptidase subunit | low | > 80 |
| Pseudomonas stutzeri RCH2 | 0.72 | Psest_1242 | | tRNA-guanine transglycosylase, queuosine-34-forming | 0.68 | Psest_3936 | | ATP-dependent protease HslVU, peptidase subunit | low | > 67 |
| Pseudomonas fluorescens FW300-N2E3 | 0.72 | AO353_15790 | | queuine tRNA-ribosyltransferase | 0.73 | AO353_12430 | | ATP-dependent protease subunit HslV | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.72 | PfGW456L13_4882 | | tRNA-guanine transglycosylase (EC 2.4.2.29) | 0.67 | PfGW456L13_289 | | ATP-dependent protease HslV (EC 3.4.25.-) | — | — |
| Kangiella aquimarina DSM 16071 | 0.72 | B158DRAFT_2516 | | tRNA-guanine transglycosylase (EC 2.4.2.29) | 0.80 | B158DRAFT_0748 | | ATP-dependent protease HslVU, peptidase subunit | low | > 40 |
| Pseudomonas sp. RS175 | 0.72 | PFR28_00277 | | Queuine tRNA-ribosyltransferase | 0.68 | PFR28_04999 | | ATP-dependent protease subunit HslV | — | — |
| Marinobacter adhaerens HP15 | 0.72 | HP15_1479 | | queuine tRNA-ribosyltransferase | 0.77 | HP15_466 | | ATP-dependent protease peptidase subunit | low | > 73 |
| Pseudomonas syringae pv. syringae B728a | 0.72 | Psyr_1228 | | tRNA-guanine transglycosylase | 0.69 | Psyr_0395 | | HslV component of HslUV peptidase, Threonine peptidase, MEROPS family T01B | — | — |
| Pseudomonas putida KT2440 | 0.72 | PP_0833 | | queuine tRNA-ribosyltransferase | 0.71 | PP_5000 | | peptidase component of the ATP-dependent HslVU protease | low | > 96 |
| Pseudomonas fluorescens FW300-N1B4 | 0.72 | Pf1N1B4_3006 | | tRNA-guanine transglycosylase (EC 2.4.2.29) | 0.74 | Pf1N1B4_1552 | | ATP-dependent protease HslV (EC 3.4.25.-) | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.72 | Psyr_1228 | | tRNA-guanine transglycosylase | 0.69 | Psyr_0395 | | HslV component of HslUV peptidase, Threonine peptidase, MEROPS family T01B | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.72 | Pf6N2E2_3198 | | tRNA-guanine transglycosylase (EC 2.4.2.29) | 0.67 | Pf6N2E2_3769 | | ATP-dependent protease HslV (EC 3.4.25.-) | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.72 | AO356_06690 | | queuine tRNA-ribosyltransferase | 0.67 | AO356_09455 | | ATP-dependent protease subunit HslV | low | > 104 |
| Pseudomonas fluorescens SBW25-INTG | 0.71 | PFLU_RS24900 | | tRNA guanosine(34) transglycosylase Tgt | 0.74 | PFLU_RS01965 | | ATP-dependent protease subunit HslV | low | > 109 |
| Pseudomonas simiae WCS417 | 0.71 | PS417_23245 | | queuine tRNA-ribosyltransferase | 0.74 | PS417_01920 | | ATP-dependent protease subunit HslV | — | — |
| Pseudomonas fluorescens SBW25 | 0.71 | PFLU_RS24900 | | tRNA guanosine(34) transglycosylase Tgt | 0.74 | PFLU_RS01965 | | ATP-dependent protease subunit HslV | low | > 109 |
| Dechlorosoma suillum PS | 0.68 | Dsui_3323 | | tRNA-guanine transglycosylase, queuosine-34-forming | 0.70 | Dsui_0581 | | ATP-dependent protease HslVU, peptidase subunit | low | > 51 |
| Dyella japonica UNC79MFTsu3.2 | 0.66 | ABZR86_RS09540 | | tRNA guanosine(34) transglycosylase Tgt | 0.72 | ABZR86_RS15035 | | ATP-dependent protease subunit HslV | 0.41 | 73 |
| Rhodanobacter denitrificans MT42 | 0.66 | LRK55_RS02880 | | tRNA guanosine(34) transglycosylase Tgt | 0.70 | LRK55_RS08290 | | ATP-dependent protease subunit HslV | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.66 | LRK54_RS03130 | | tRNA guanosine(34) transglycosylase Tgt | 0.70 | LRK54_RS08525 | | ATP-dependent protease subunit HslV | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.65 | RR42_RS17400 | | queuine tRNA-ribosyltransferase | 0.64 | RR42_RS01060 | | peptidase | low | > 128 |
| Lysobacter sp. OAE881 | 0.65 | ABIE51_RS15020 | | tRNA guanosine(34) transglycosylase Tgt | 0.59 | ABIE51_RS03040 | | ATP-dependent protease subunit HslV | low | > 62 |
| Castellaniella sp019104865 MT123 | 0.65 | ABCV34_RS15365 | | tRNA guanosine(34) transglycosylase Tgt | 0.66 | ABCV34_RS13415 | | ATP-dependent protease subunit HslV | low | > 48 |
| Rhodanobacter sp. FW510-T8 | 0.65 | OKGIIK_10000 | tgt | tRNA guanosine(34) transglycosylase Tgt | 0.70 | OKGIIK_15320 | hslV | ATP-dependent protease subunit HslV | — | — |
| Herbaspirillum seropedicae SmR1 | 0.64 | HSERO_RS06175 | | queuine tRNA-ribosyltransferase | 0.63 | HSERO_RS00910 | | peptidase | low | > 78 |
| Paraburkholderia sabiae LMG 24235 | 0.63 | QEN71_RS26640 | | tRNA guanosine(34) transglycosylase Tgt | 0.64 | QEN71_RS00335 | | ATP-dependent protease subunit HslV | low | > 153 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.63 | H281DRAFT_04670 | | tRNA-guanine transglycosylase | 0.65 | H281DRAFT_02206 | | HslV component of HslUV peptidase. Threonine peptidase. MEROPS family T01B | low | > 103 |
| Ralstonia sp. UNC404CL21Col | 0.62 | ABZR87_RS01280 | | tRNA guanosine(34) transglycosylase Tgt | 0.59 | ABZR87_RS05115 | | ATP-dependent protease subunit HslV | low | > 80 |
| Ralstonia solanacearum UW163 | 0.62 | UW163_RS07940 | | tRNA guanosine(34) transglycosylase Tgt | 0.59 | UW163_RS03950 | | ATP-dependent protease subunit HslV | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.62 | RALBFv3_RS05685 | | tRNA guanosine(34) transglycosylase Tgt | 0.59 | RALBFv3_RS09630 | | ATP-dependent protease subunit HslV | low | > 76 |
| Burkholderia phytofirmans PsJN | 0.62 | BPHYT_RS03410 | | queuine tRNA-ribosyltransferase | 0.64 | BPHYT_RS01635 | | ATP-dependent protease subunit HslV | — | — |
| Ralstonia solanacearum GMI1000 | 0.62 | RS_RS13575 | | tRNA guanosine(34) transglycosylase Tgt | 0.59 | RS_RS00215 | | HslU--HslV peptidase proteolytic subunit | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.61 | RPSI07_RS11615 | | tRNA guanosine(34) transglycosylase Tgt | 0.60 | RPSI07_RS23735 | | ATP-dependent protease subunit HslV | low | > 81 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.59 | GFF2798 | | tRNA-guanine transglycosylase (EC 2.4.2.29) | 0.62 | GFF552 | | ATP-dependent protease HslV (EC 3.4.25.-) | low | > 90 |
| Acidovorax sp. GW101-3H11 | 0.57 | Ac3H11_861 | | tRNA-guanine transglycosylase (EC 2.4.2.29) | 0.68 | Ac3H11_2004 | | ATP-dependent protease HslV (EC 3.4.25.-) | low | > 79 |
| Variovorax sp. SCN45 | 0.57 | GFF5534 | | Queuine tRNA-ribosyltransferase (EC 2.4.2.29) | 0.71 | GFF4484 | | ATP-dependent protease subunit HslV (EC 3.4.25.2) | low | > 127 |
| Variovorax sp. OAS795 | 0.57 | ABID97_RS01595 | | tRNA guanosine(34) transglycosylase Tgt | 0.69 | ABID97_RS06180 | | ATP-dependent protease subunit HslV | low | > 91 |
| Rhodospirillum rubrum S1H | 0.55 | Rru_A0280 | | Queuine tRNA-ribosyltransferase (NCBI) | 0.63 | Rru_A3599 | | 20S proteasome, A and B subunits (NCBI) | low | > 58 |
| Magnetospirillum magneticum AMB-1 | 0.52 | AMB_RS03090 | | tRNA guanosine(34) transglycosylase Tgt | 0.53 | AMB_RS22950 | | HslU--HslV peptidase proteolytic subunit | low | > 64 |
| Azospirillum brasilense Sp245 | 0.52 | AZOBR_RS06295 | | queuine tRNA-ribosyltransferase | 0.60 | AZOBR_RS01655 | | peptidase | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.52 | Ga0059261_1017 | | tRNA-guanine transglycosylase | 0.61 | Ga0059261_3341 | | ATP-dependent protease HslVU, peptidase subunit | low | > 68 |
| Azospirillum sp. SherDot2 | 0.52 | MPMX19_01697 | | Queuine tRNA-ribosyltransferase | 0.55 | MPMX19_02548 | | ATP-dependent protease subunit HslV | low | > 112 |
| Desulfovibrio vulgaris Miyazaki F | 0.52 | DvMF_2757 | tgt | queuine tRNA-ribosyltransferase (RefSeq) | 0.55 | DvMF_0485 | | ATP-dependent protease peptidase subunit (RefSeq) | low | > 51 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.52 | DVU0726 | tgt | queuine tRNA-ribosyltransferase (TIGR) | 0.55 | DVU1577 | hslV | ATP-dependent protease hslV (TIGR) | low | > 55 |
| Phaeobacter inhibens DSM 17395 | 0.51 | PGA1_c20570 | | queuine tRNA-ribosyltransferase Tgt | 0.53 | PGA1_c35260 | | ATP-dependent protease HslV | low | > 62 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.51 | A4249_RS02905 | | tRNA guanosine(34) transglycosylase Tgt | 0.56 | A4249_RS12390 | | ATP-dependent protease subunit HslV | low | > 48 |
| Caulobacter crescentus NA1000 Δfur | 0.51 | CCNA_01659 | | queuine tRNA-ribosyltransferase | 0.55 | CCNA_03843 | | ATP-dependent endopeptidase hsl proteolytic subunit HslV | low | > 67 |
| Caulobacter crescentus NA1000 | 0.51 | CCNA_01659 | | queuine tRNA-ribosyltransferase | 0.55 | CCNA_03843 | | ATP-dependent endopeptidase hsl proteolytic subunit HslV | low | > 66 |
| Dinoroseobacter shibae DFL-12 | 0.50 | Dshi_2346 | | queuine tRNA-ribosyltransferase (RefSeq) | 0.55 | Dshi_3440 | | 20S proteasome A and B subunits (RefSeq) | low | > 64 |
| Rhodopseudomonas palustris CGA009 | 0.50 | TX73_013485 | | tRNA guanosine(34) transglycosylase Tgt | 0.58 | TX73_001600 | | ATP-dependent protease subunit HslV | low | > 86 |
| Sinorhizobium meliloti 1021 | 0.50 | SMc01206 | | queuine tRNA-ribosyltransferase | 0.61 | SMc02575 | | ATP-dependent protease peptidase subunit | low | > 103 |
| Bosea sp. OAE506 | 0.49 | ABIE41_RS18290 | | tRNA guanosine(34) transglycosylase Tgt | 0.58 | ABIE41_RS04430 | | ATP-dependent protease subunit HslV | low | > 77 |
| Rhizobium sp. OAE497 | 0.49 | ABIE40_RS09435 | | tRNA guanosine(34) transglycosylase Tgt | 0.57 | ABIE40_RS19465 | | ATP-dependent protease subunit HslV | low | > 107 |
| Agrobacterium fabrum C58 | 0.48 | Atu1677 | | queuine tRNA-ribosyltransferase | 0.57 | Atu0044 | | heat shock protein hslV | low | > 89 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.47 | Echvi_2049 | | tRNA-guanine transglycosylase, queuosine-34-forming | 0.55 | Echvi_3885 | | ATP-dependent protease HslVU, peptidase subunit | low | > 79 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.46 | CA264_00655 | | tRNA-guanine(34) transglycosylase | 0.49 | CA264_04815 | | ATP-dependent protease subunit HslV | low | > 74 |
Not shown: 13 genomes with orthologs for ECD_00354 only; 1 genomes with orthologs for ECD_03817 only