| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_05185 | | excinuclease ABC subunit UvrB | 1.0 | CSW01_12770 | | ABC transporter permease | 0.51 | 12 |
| Serratia liquefaciens MT49 | 0.78 | IAI46_06550 | | excinuclease ABC subunit B | 0.79 | IAI46_22425 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 87 |
| Erwinia tracheiphila SCR3 | 0.77 | LU632_RS09160 | uvrB | excinuclease ABC subunit B | 0.76 | LU632_RS21240 | mlaE | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 73 |
| Erwinia tracheiphila HP pepo 2.2 | 0.77 | IJEDHG_19590 | uvrB | excinuclease ABC subunit UvrB | 0.76 | IJEDHG_13785 | mlaE | lipid asymmetry maintenance ABC transporter permease subunit MlaE | — | — |
| Pectobacterium carotovorum WPP14 | 0.77 | HER17_RS13420 | | excinuclease ABC subunit B | 0.79 | HER17_RS20020 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 75 |
| Rahnella sp. WP5 | 0.77 | EX31_RS23720 | | excinuclease ABC subunit B | 0.77 | EX31_RS12440 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 89 |
| Pantoea agglomerans CFBP13505 P0401 | 0.76 | PagCFBP13516_RS13615 | uvrB | excinuclease ABC subunit UvrB | 0.76 | PagCFBP13516_RS17430 | mlaE | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 80 |
| Pantoea sp. MT58 | 0.76 | IAI47_13505 | | excinuclease ABC subunit B | 0.76 | IAI47_17140 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.76 | OHPLBJKB_02934 | | UvrABC system protein B | 0.76 | OHPLBJKB_00506 | | putative phospholipid ABC transporter permease protein MlaE | low | > 74 |
| Escherichia coli ECRC99 | 0.76 | KEDOAH_21530 | uvrB | excinuclease ABC subunit UvrB | 0.76 | KEDOAH_10170 | mlaE | lipid asymmetry maintenance ABC transporter permease subunit MlaE | — | — |
| Escherichia coli ECRC101 | 0.76 | MCAODC_25595 | uvrB | excinuclease ABC subunit UvrB | 0.76 | MCAODC_08500 | mlaE | lipid asymmetry maintenance ABC transporter permease subunit MlaE | 0.46 | 15 |
| Escherichia coli BL21 | 0.76 | ECD_00746 | | exision nuclease of nucleotide excision repair, DNA damage recognition component | 0.76 | ECD_03059 | | ABC transporter maintaining OM lipid asymmetry, inner membrane permease protein | low | > 61 |
| Escherichia coli ECRC62 | 0.76 | BNILDI_21020 | uvrB | excinuclease ABC subunit UvrB | 0.76 | BNILDI_01755 | mlaE | lipid asymmetry maintenance ABC transporter permease subunit MlaE | 0.73 | 24 |
| Escherichia coli ECOR27 | 0.76 | NOLOHH_22750 | uvrB | excinuclease ABC subunit UvrB | 0.76 | NOLOHH_09780 | mlaE | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 75 |
| Escherichia coli ECRC102 | 0.76 | NIAGMN_04425 | uvrB | excinuclease ABC subunit UvrB | 0.76 | NIAGMN_15740 | mlaE | lipid asymmetry maintenance ABC transporter permease subunit MlaE | 0.87 | 3 |
| Escherichia coli ECRC100 | 0.76 | OKFHMN_06380 | uvrB | excinuclease ABC subunit UvrB | 0.76 | OKFHMN_17980 | mlaE | lipid asymmetry maintenance ABC transporter permease subunit MlaE | 0.64 | 17 |
| Escherichia coli Nissle 1917 | 0.76 | ECOLIN_RS04150 | | excinuclease ABC subunit UvrB | 0.76 | ECOLIN_RS18385 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 55 |
| Escherichia coli ECRC98 | 0.76 | JDDGAC_10015 | uvrB | excinuclease ABC subunit UvrB | 0.76 | JDDGAC_21605 | mlaE | lipid asymmetry maintenance ABC transporter permease subunit MlaE | 0.56 | 4 |
| Escherichia coli BW25113 | 0.76 | b0779 | uvrB | excinuclease ABC subunit B (NCBI) | 0.76 | b3194 | yrbE | predicted toluene transporter subunit: membrane component of ABC superfamily (NCBI) | low | > 76 |
| Escherichia fergusonii Becca | 0.76 | EFB2_03326 | | UvrABC system protein B | 0.76 | EFB2_00629 | | Intermembrane phospholipid transport system permease protein MlaE | low | > 86 |
| Escherichia coli ECOR38 | 0.76 | HEPCGN_01660 | uvrB | excinuclease ABC subunit UvrB | 0.76 | HEPCGN_16855 | mlaE | lipid asymmetry maintenance ABC transporter permease subunit MlaE | 0.56 | 8 |
| Enterobacter asburiae PDN3 | 0.76 | EX28DRAFT_2211 | | Excinuclease ABC subunit B | 0.76 | EX28DRAFT_3248 | | ABC transport permease subunit | 0.61 | 37 |
| Klebsiella michiganensis M5al | 0.76 | BWI76_RS08785 | | excinuclease ABC subunit B | 0.75 | BWI76_RS25225 | | ABC transporter permease | low | > 92 |
| Dickeya dadantii 3937 | 0.76 | DDA3937_RS08530 | | excinuclease ABC subunit B | 0.78 | DDA3937_RS01570 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 74 |
| Enterobacter sp. TBS_079 | 0.76 | MPMX20_01408 | | UvrABC system protein B | 0.77 | MPMX20_04100 | | Intermembrane phospholipid transport system permease protein MlaE | low | > 85 |
| Shewanella loihica PV-4 | 0.76 | Shew_2064 | | excinuclease ABC subunit B (RefSeq) | 0.68 | Shew_3303 | | hypothetical protein (RefSeq) | low | > 60 |
| Dickeya dianthicola ME23 | 0.75 | DZA65_RS08990 | | excinuclease ABC subunit B | 0.78 | DZA65_RS01550 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 75 |
| Dickeya dianthicola 67-19 | 0.75 | HGI48_RS08695 | | excinuclease ABC subunit B | 0.78 | HGI48_RS01485 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 71 |
| Klebsiella pneumoniae MRSN742743 | 0.75 | GJGHJB_03446 | uvrB | excinuclease ABC subunit UvrB | 0.76 | GJGHJB_00504 | mlaE | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 83 |
| Klebsiella pneumoniae MKP103 | 0.75 | KDGMDA_17050 | | excinuclease ABC subunit UvrB | 0.76 | KDGMDA_06040 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 94 |
| Erwinia amylovora T8 | 0.75 | OLJFJH_16735 | | excinuclease ABC subunit UvrB | 0.75 | OLJFJH_07110 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 58 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.75 | GFF675 | | Excinuclease ABC subunit B | 0.75 | GFF2938 | | Uncharacterized ABC transporter, permease component YrbE | low | > 78 |
| Alteromonas macleodii MIT1002 | 0.75 | MIT1002_01261 | | Excinuclease ABC subunit B | 0.73 | MIT1002_00835 | | putative phospholipid ABC transporter permease protein MlaE | low | > 70 |
| Shewanella amazonensis SB2B | 0.74 | Sama_1828 | | excinuclease ABC subunit B (RefSeq) | 0.71 | Sama_3080 | | hypothetical protein (RefSeq) | low | > 62 |
| Shewanella oneidensis MR-1 | 0.74 | SO2506 | uvrB | excinuclease ABC, B subunit (NCBI ptt file) | 0.70 | SO3953 | | conserved hypothetical protein TIGR00056 (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.74 | Shewana3_2166 | | excinuclease ABC subunit B (RefSeq) | 0.69 | Shewana3_0679 | | hypothetical protein (RefSeq) | low | > 73 |
| Pseudomonas sp. RS175 | 0.73 | PFR28_02837 | | UvrABC system protein B | 0.64 | PFR28_00180 | | Intermembrane phospholipid transport system permease protein MlaE | low | > 88 |
| Pseudomonas fluorescens FW300-N2C3 | 0.73 | AO356_21335 | | excinuclease ABC subunit B | 0.65 | AO356_07000 | | ABC transporter permease | low | > 104 |
| Pseudomonas aeruginosa PA14 | 0.72 | IKLFDK_15985 | | excinuclease ABC subunit UvrB | 0.67 | IKLFDK_01810 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 98 |
| Pseudomonas aeruginosa MRSN321 | 0.72 | PFGADD_01823 | uvrB | excinuclease ABC subunit UvrB | 0.67 | PFGADD_04658 | mlaE | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 99 |
| Pseudomonas aeruginosa PUPa3 | 0.72 | NPBIFN_01860 | uvrB | excinuclease ABC subunit UvrB | 0.67 | NPBIFN_04717 | mlaE | lipid asymmetry maintenance ABC transporter permease subunit MlaE | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.72 | Pf6N2E2_52 | | Excinuclease ABC subunit B | 0.65 | Pf6N2E2_3259 | | Uncharacterized ABC transporter, permease component YrbE | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.72 | Psyr_1974 | | Excinuclease ABC subunit B | 0.66 | Psyr_4140 | | Protein of unknown function DUF140 | low | > 86 |
| Pseudomonas sp. DMC3 | 0.72 | GFF774 | | UvrABC system protein B | 0.65 | GFF1835 | | Intermembrane phospholipid transport system permease protein MlaE | low | > 89 |
| Pseudomonas syringae pv. syringae B728a | 0.72 | Psyr_1974 | | Excinuclease ABC subunit B | 0.66 | Psyr_4140 | | Protein of unknown function DUF140 | low | > 86 |
| Pseudomonas stutzeri RCH2 | 0.72 | Psest_1296 | | excinuclease ABC, B subunit | 0.66 | Psest_3306 | | conserved hypothetical integral membrane protein | low | > 67 |
| Pseudomonas orientalis W4I3 | 0.72 | QF045_RS20805 | | excinuclease ABC subunit UvrB | 0.62 | QF045_RS07370 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 93 |
| Pseudomonas fluorescens FW300-N2E3 | 0.72 | AO353_20545 | | excinuclease ABC subunit B | 0.64 | AO353_05145 | | ABC transporter permease | low | > 101 |
| Pseudomonas protegens RBAN4 | 0.72 | FABNJH_10685 | uvrB | excinuclease ABC subunit UvrB | 0.64 | FABNJH_04785 | mlaE | lipid asymmetry maintenance ABC transporter permease subunit MlaE | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.72 | Pf1N1B4_26 | | Excinuclease ABC subunit B | 0.63 | Pf1N1B4_1073 | | Uncharacterized ABC transporter, permease component YrbE | — | — |
| Pseudomonas putida KT2440 | 0.72 | PP_1974 | | excinuclease UvrABC protein B | 0.65 | PP_0959 | | phospholipid ABC transporter | — | — |
| Pseudomonas fluorescens SBW25 | 0.72 | PFLU_RS20655 | | excinuclease ABC subunit B | 0.62 | PFLU_RS04435 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 109 |
| Pseudomonas simiae WCS417 | 0.72 | PS417_18685 | | excinuclease ABC subunit B | 0.63 | PS417_04380 | | ABC transporter permease | low | > 88 |
| Pseudomonas fluorescens SBW25-INTG | 0.72 | PFLU_RS20655 | | excinuclease ABC subunit B | 0.62 | PFLU_RS04435 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 109 |
| Pseudomonas sp. SVBP6 | 0.72 | COO64_RS05730 | uvrB | excinuclease ABC subunit UvrB | 0.66 | COO64_RS04320 | mlaE | lipid asymmetry maintenance ABC transporter permease subunit MlaE | 0.46 | 7 |
| Pseudomonas sp. BP01 | 0.72 | JOY50_RS16715 | uvrB | excinuclease ABC subunit UvrB | 0.65 | JOY50_RS11165 | mlaE | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 84 |
| Pseudomonas sp. FW215-L2 | 0.72 | GFF3207 | | UvrABC system protein B | 0.62 | GFF1996 | | putative phospholipid ABC transporter permease protein MlaE | low | > 111 |
| Pseudomonas lactucae CFBP13502 | 0.72 | GEMAOFIL_03964 | | UvrABC system protein B | 0.63 | GEMAOFIL_01082 | | Intermembrane phospholipid transport system permease protein MlaE | low | > 96 |
| Pseudomonas fluorescens GW456-L13 | 0.71 | PfGW456L13_3959 | | Excinuclease ABC subunit B | 0.64 | PfGW456L13_5007 | | Uncharacterized ABC transporter, permease component YrbE | — | — |
| Pseudomonas segetis P6 | 0.71 | ACVTMO_RS15315 | uvrB | excinuclease ABC subunit UvrB | 0.67 | ACVTMO_RS19085 | mlaE | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 75 |
| Pseudomonas sp. S08-1 | 0.70 | OH686_04580 | | excinuclease ABC subunit B | 0.66 | OH686_08505 | | Phospholipid ABC transporter permease protein MlaE | low | > 80 |
| Marinobacter adhaerens HP15 | 0.70 | HP15_1372 | | excinuclease ABC subunit B | 0.68 | HP15_2435 | | ABC-type transport system involved in resistance to organic solvents, permease component | low | > 73 |
| Dyella japonica UNC79MFTsu3.2 | 0.69 | ABZR86_RS09750 | | excinuclease ABC subunit UvrB | 0.50 | ABZR86_RS11880 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 74 |
| Rhodanobacter sp. FW510-T8 | 0.69 | OKGIIK_03100 | uvrB | excinuclease ABC subunit UvrB | 0.49 | OKGIIK_12130 | mlaE | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 53 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.69 | Xcc-8004.2034.1 | | Excinuclease ABC subunit B | 0.44 | Xcc-8004.5365.1 | | Uncharacterized ABC transporter, permease component YrbE | low | > 74 |
| Rhodanobacter denitrificans FW104-10B01 | 0.69 | LRK54_RS14235 | | excinuclease ABC subunit UvrB | 0.50 | LRK54_RS11765 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.69 | LRK55_RS13955 | | excinuclease ABC subunit UvrB | 0.50 | LRK55_RS11490 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 63 |
| Rhodanobacter sp000427505 FW510-R12 | 0.69 | LRK53_RS14375 | | excinuclease ABC subunit UvrB | 0.50 | LRK53_RS16775 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 59 |
| Acinetobacter baumannii LAC-4 | 0.67 | RR41_RS04945 | | excinuclease ABC subunit UvrB | 0.56 | RR41_RS02035 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | — | — |
| Lysobacter sp. OAE881 | 0.67 | ABIE51_RS15310 | | excinuclease ABC subunit UvrB | 0.39 | ABIE51_RS01010 | | MlaE family lipid ABC transporter permease subunit | low | > 62 |
| Dechlorosoma suillum PS | 0.66 | Dsui_2434 | | excinuclease ABC, B subunit | 0.53 | Dsui_1399 | | conserved hypothetical integral membrane protein | low | > 51 |
| Ralstonia sp. UNC404CL21Col | 0.66 | ABZR87_RS09940 | | excinuclease ABC subunit UvrB | 0.55 | ABZR87_RS02550 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | 0.68 | 22 |
| Acinetobacter radioresistens SK82 | 0.66 | MPMX26_02142 | | UvrABC system protein B | 0.59 | MPMX26_02740 | | Intermembrane phospholipid transport system permease protein MlaE | low | > 36 |
| Ralstonia solanacearum PSI07 | 0.66 | RPSI07_RS19240 | | excinuclease ABC subunit UvrB | 0.54 | RPSI07_RS10340 | | ABC transporter permease | low | > 81 |
| Ralstonia solanacearum IBSBF1503 | 0.66 | RALBFv3_RS14225 | | excinuclease ABC subunit UvrB | 0.55 | RALBFv3_RS06895 | | ABC transporter permease | — | — |
| Ralstonia solanacearum UW163 | 0.66 | UW163_RS11690 | | excinuclease ABC subunit UvrB | 0.55 | UW163_RS06720 | | ABC transporter permease | — | — |
| Ralstonia solanacearum GMI1000 | 0.65 | RS_RS05005 | | UvrABC system protein B | 0.56 | RS_RS14840 | | ABC transporter permease | low | > 80 |
| Paraburkholderia sabiae LMG 24235 | 0.65 | QEN71_RS23870 | | excinuclease ABC subunit UvrB | 0.53 | QEN71_RS27915 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 153 |
| Cupriavidus basilensis FW507-4G11 | 0.65 | RR42_RS05995 | | excinuclease ABC subunit B | 0.57 | RR42_RS18965 | | ABC transporter permease | low | > 128 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.65 | H281DRAFT_04973 | | Excinuclease ABC subunit B | 0.55 | H281DRAFT_05642 | | phospholipid/cholesterol/gamma-HCH transport system permease protein | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.65 | ABIE53_001645 | | excinuclease ABC subunit B | 0.56 | ABIE53_003711 | | phospholipid/cholesterol/gamma-HCH transport system permease protein | low | > 113 |
| Burkholderia phytofirmans PsJN | 0.64 | BPHYT_RS06905 | | excinuclease ABC subunit B | 0.51 | BPHYT_RS17760 | | ABC transporter permease | low | > 109 |
| Collimonas humicola GW821-FHT01A05 | 0.64 | MPMX01_01278 | | UvrABC system protein B | 0.55 | MPMX01_00610 | | Intermembrane phospholipid transport system permease protein MlaE | low | > 87 |
| Castellaniella sp019104865 MT123 | 0.64 | ABCV34_RS05110 | | excinuclease ABC subunit UvrB | 0.51 | ABCV34_RS11185 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | — | — |
| Herbaspirillum seropedicae SmR1 | 0.64 | HSERO_RS15840 | | excinuclease ABC subunit B | 0.48 | HSERO_RS20395 | | ABC transporter permease | — | — |
| Methylophilus sp. DMC18 | 0.63 | GFF1123 | | UvrABC system protein B | 0.55 | GFF1552 | | Intermembrane phospholipid transport system permease protein MlaE | — | — |
| Acidovorax sp. GW101-3H11 | 0.63 | Ac3H11_4114 | | Excinuclease ABC subunit B | 0.55 | Ac3H11_4713 | | Uncharacterized ABC transporter, permease component YrbE | 0.51 | 25 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.63 | GFF4962 | | Excinuclease ABC subunit B | 0.51 | GFF1324 | | Uncharacterized ABC transporter, permease component YrbE | low | > 92 |
| Variovorax sp. OAS795 | 0.62 | ABID97_RS13995 | | excinuclease ABC subunit UvrB | 0.55 | ABID97_RS23210 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 91 |
| Variovorax sp. SCN45 | 0.62 | GFF945 | | Excinuclease ABC subunit B | 0.54 | GFF5335 | | Phospholipid ABC transporter permease protein MlaE | low | > 127 |
| Azospirillum brasilense Sp245 | 0.61 | AZOBR_RS16420 | | excinuclease ABC subunit B | 0.29 | AZOBR_RS08345 | | ABC transporter permease | low | > 97 |
| Azospirillum sp. SherDot2 | 0.60 | MPMX19_01038 | | UvrABC system protein B | 0.29 | MPMX19_06141 | | Intermembrane phospholipid transport system permease protein MlaE | low | > 112 |
| Caulobacter crescentus NA1000 Δfur | 0.60 | CCNA_03076 | | excinuclease ABC subunit B | 0.27 | CCNA_03809 | | organic solvent resistance transport system permease | low | > 67 |
| Caulobacter crescentus NA1000 | 0.60 | CCNA_03076 | | excinuclease ABC subunit B | 0.27 | CCNA_03809 | | organic solvent resistance transport system permease | low | > 66 |
| Magnetospirillum magneticum AMB-1 | 0.59 | AMB_RS19255 | | excinuclease ABC subunit UvrB | 0.29 | AMB_RS10570 | | ABC transporter permease | — | — |
| Rhodospirillum rubrum S1H | 0.58 | Rru_A1133 | | Excinuclease ABC, B subunit (NCBI) | 0.29 | Rru_A0408 | | Protein of unknown function DUF140 (NCBI) | — | — |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.57 | DVU1605 | uvrB | excinuclease ABC, B subunit (TIGR) | 0.35 | DVU1246 | | membrane protein, putative (TIGR) | low | > 55 |
| Desulfovibrio vulgaris Miyazaki F | 0.57 | DvMF_0454 | | excinuclease ABC subunit B (RefSeq) | 0.36 | DvMF_0852 | | protein of unknown function DUF140 (RefSeq) | low | > 51 |
Not shown: 24 genomes with orthologs for CSW01_05185 only; 0 genomes with orthologs for CSW01_12770 only