Conservation of cofitness between CSW01_13390 and CSW01_10085 in Vibrio cholerae E7946 ATCC 55056

97 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_13390 phosphoenolpyruvate carboxylase 1.0 CSW01_10085 beta-ketoacyl-[acyl-carrier-protein] synthase II 0.45 14
Dickeya dianthicola 67-19 0.66 HGI48_RS00850 phosphoenolpyruvate carboxylase 0.73 HGI48_RS13175 beta-ketoacyl-ACP synthase II low > 71
Dickeya dadantii 3937 0.66 DDA3937_RS20360 phosphoenolpyruvate carboxylase 0.73 DDA3937_RS13110 beta-ketoacyl-ACP synthase II low > 74
Pectobacterium carotovorum WPP14 0.65 HER17_RS20655 phosphoenolpyruvate carboxylase 0.75 HER17_RS08660 beta-ketoacyl-ACP synthase II low > 75
Serratia liquefaciens MT49 0.65 IAI46_24525 phosphoenolpyruvate carboxylase 0.74 IAI46_09800 beta-ketoacyl-ACP synthase II low > 87
Dickeya dianthicola ME23 0.65 DZA65_RS00895 phosphoenolpyruvate carboxylase 0.73 DZA65_RS13645 beta-ketoacyl-ACP synthase II low > 75
Klebsiella pneumoniae MKP103 0.64 KDGMDA_09355 phosphoenolpyruvate carboxylase 0.75 KDGMDA_18705 beta-ketoacyl-ACP synthase II low > 95
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.64 GFF2342 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) 0.72 GFF3377 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.41) low > 78
Klebsiella michiganensis M5al 0.64 BWI76_RS00835 phosphoenolpyruvate carboxylase 0.75 BWI76_RS11100 beta-ketoacyl-[acyl-carrier-protein] synthase II low > 92
Pantoea sp. MT58 0.64 IAI47_00895 phosphoenolpyruvate carboxylase 0.75 IAI47_12060 beta-ketoacyl-ACP synthase II low > 76
Escherichia coli ECRC101 0.64 MCAODC_04095 ppc phosphoenolpyruvate carboxylase 0.73 MCAODC_22925 fabF beta-ketoacyl-ACP synthase II low > 87
Escherichia coli ECRC102 0.64 NIAGMN_11345 ppc phosphoenolpyruvate carboxylase 0.73 NIAGMN_24265 fabF beta-ketoacyl-ACP synthase II
Escherichia coli ECRC100 0.64 OKFHMN_13595 ppc phosphoenolpyruvate carboxylase 0.73 OKFHMN_03565 fabF beta-ketoacyl-ACP synthase II low > 79
Escherichia coli ECRC98 0.64 JDDGAC_17220 ppc phosphoenolpyruvate carboxylase 0.73 JDDGAC_07225 fabF beta-ketoacyl-ACP synthase II low > 87
Escherichia coli ECRC99 0.64 KEDOAH_14565 ppc phosphoenolpyruvate carboxylase 0.73 KEDOAH_24190 fabF beta-ketoacyl-ACP synthase II
Escherichia coli BW25113 0.63 b3956 ppc phosphoenolpyruvate carboxylase (NCBI) 0.73 b1095 fabF 3-oxoacyl-(acyl carrier protein) synthase (NCBI) low > 76
Enterobacter asburiae PDN3 0.63 EX28DRAFT_4418 Phosphoenolpyruvate carboxylase, type 1 (EC 4.1.1.31) 0.75 EX28DRAFT_1834 beta-ketoacyl-acyl-carrier-protein synthase II low > 76
Escherichia coli ECRC62 0.63 BNILDI_05785 ppc phosphoenolpyruvate carboxylase 0.73 BNILDI_19255 fabF beta-ketoacyl-ACP synthase II low > 75
Escherichia coli ECOR27 0.63 NOLOHH_05740 ppc phosphoenolpyruvate carboxylase 0.73 NOLOHH_21095 fabF beta-ketoacyl-ACP synthase II low > 76
Escherichia fergusonii Becca 0.63 EFB2_04658 Phosphoenolpyruvate carboxylase 0.73 EFB2_02880 3-oxoacyl-[acyl-carrier-protein] synthase 2 low > 86
Escherichia coli Nissle 1917 0.63 ECOLIN_RS22835 phosphoenolpyruvate carboxylase 0.73 ECOLIN_RS06325 beta-ketoacyl-ACP synthase II
Escherichia coli BL21 0.63 ECD_03841 phosphoenolpyruvate carboxylase 0.73 ECD_01091 3-oxoacyl-[acyl-carrier-protein] synthase II
Escherichia coli ECOR38 0.63 HEPCGN_12240 ppc phosphoenolpyruvate carboxylase 0.73 HEPCGN_23915 fabF beta-ketoacyl-ACP synthase II low > 88
Pantoea agglomerans CFBP13505 P0401 0.63 PagCFBP13505_RS18445 phosphoenolpyruvate carboxylase 0.74 PagCFBP13505_RS05275 beta-ketoacyl-ACP synthase II low > 74
Escherichia coli HS(pFamp)R (ATCC 700891) 0.63 OHPLBJKB_04094 Phosphoenolpyruvate carboxylase 0.73 OHPLBJKB_02571 3-oxoacyl-[acyl-carrier-protein] synthase 2 low > 74
Enterobacter sp. TBS_079 0.63 MPMX20_04524 Phosphoenolpyruvate carboxylase 0.73 MPMX20_01775 3-oxoacyl-[acyl-carrier-protein] synthase 2 low > 85
Rahnella sp. WP5 0.63 EX31_RS14200 phosphoenolpyruvate carboxylase 0.75 EX31_RS24445 beta-ketoacyl-ACP synthase II low > 89
Erwinia tracheiphila HP pepo 2.2 0.62 IJEDHG_13035 ppc phosphoenolpyruvate carboxylase 0.72 IJEDHG_00670 fabF beta-ketoacyl-ACP synthase II low > 61
Erwinia tracheiphila SCR3 0.62 LU632_RS19625 ppc phosphoenolpyruvate carboxylase 0.72 LU632_RS14810 fabF beta-ketoacyl-ACP synthase II low > 73
Erwinia amylovora T8 0.62 OLJFJH_06110 Phosphoenolpyruvate carboxylase 0.73 OLJFJH_15520 beta-ketoacyl-ACP synthase II low > 58
Shewanella oneidensis MR-1 0.56 SO0274 ppc phosphoenolpyruvate carboxylase (NCBI ptt file) 0.71 SO2774 fabF-1 3-oxoacyl-(acyl-carrier-protein) synthase II (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.55 Shewana3_3906 phosphoenolpyruvate carboxylase (RefSeq) 0.71 Shewana3_2557 3-oxoacyl-[acyl-carrier-protein] synthase II (RefSeq) low > 73
Shewanella amazonensis SB2B 0.54 Sama_0254 phosphoenolpyruvate carboxylase (RefSeq) 0.74 Sama_1978 3-oxoacyl-(acyl-carrier-protein) synthase II (RefSeq) low > 62
Shewanella loihica PV-4 0.53 Shew_0200 phosphoenolpyruvate carboxylase (RefSeq) 0.73 Shew_1605 beta-ketoacyl synthase (RefSeq)
Alteromonas macleodii MIT1002 0.51 MIT1002_03491 Phosphoenolpyruvate carboxylase 0.70 MIT1002_01735 3-oxoacyl-[acyl-carrier-protein] synthase 2
Pseudomonas sp. RS175 0.50 PFR28_00368 Phosphoenolpyruvate carboxylase 0.65 PFR28_03008 3-oxoacyl-[acyl-carrier-protein] synthase 2
Pseudomonas aeruginosa PUPa3 0.49 DQ20_RS42585 ppc;go_function=phosphoenolpyruvate phosphoenolpyruvate carboxylase 0.65 DQ20_RS33435 fabF;go_function=3-oxoacyl-[acyl-carrier-protein beta-ketoacyl-ACP synthase II
Pseudomonas aeruginosa MRSN321 0.49 DY961_RS14540 ppc;go_function=phosphoenolpyruvate phosphoenolpyruvate carboxylase 0.65 DY961_RS02150 fabF;go_function=3-oxoacyl-[acyl-carrier-protein beta-ketoacyl-ACP synthase II
Pseudomonas aeruginosa PA14 0.49 IKLFDK_18825 phosphoenolpyruvate carboxylase 0.65 IKLFDK_15085 beta-ketoacyl-ACP synthase II low > 98
Pseudomonas segetis P6 0.49 MPMX49_01618 Phosphoenolpyruvate carboxylase 0.67 MPMX49_02082 3-oxoacyl-[acyl-carrier-protein] synthase 2 low > 75
Pseudomonas orientalis W4I3 0.49 QF045_RS08910 phosphoenolpyruvate carboxylase 0.65 QF045_RS23510 beta-ketoacyl-ACP synthase II low > 93
Pseudomonas stutzeri RCH2 0.49 Psest_1557 Phosphoenolpyruvate carboxylase 0.65 Psest_1690 beta-ketoacyl-acyl-carrier-protein synthase II
Pseudomonas fluorescens SBW25 0.49 PFLU_RS06130 phosphoenolpyruvate carboxylase 0.65 PFLU_RS23045 beta-ketoacyl-ACP synthase II low > 109
Pseudomonas fluorescens SBW25-INTG 0.49 PFLU_RS06130 phosphoenolpyruvate carboxylase 0.65 PFLU_RS23045 beta-ketoacyl-ACP synthase II low > 109
Pseudomonas sp. SVBP6 0.49 COO64_RS19495 ppc phosphoenolpyruvate carboxylase 0.66 COO64_RS05795 fabF beta-ketoacyl-ACP synthase II low > 93
Pseudomonas fluorescens FW300-N1B4 0.49 Pf1N1B4_3051 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) 0.61 Pf1N1B4_449 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.179)
Pseudomonas fluorescens FW300-N2E3 0.49 AO353_16310 phosphoenolpyruvate carboxylase 0.64 AO353_01355 3-oxoacyl-ACP synthase low > 101
Pseudomonas simiae WCS417 0.49 PS417_06060 phosphoenolpyruvate carboxylase 0.65 PS417_21430 3-oxoacyl-ACP synthase low > 88
Pseudomonas fluorescens FW300-N2C3 0.49 AO356_06185 phosphoenolpyruvate carboxylase 0.65 AO356_20175 3-oxoacyl-ACP synthase low > 104
Pseudomonas lactucae CFBP13502 0.49 GEMAOFIL_01382 Phosphoenolpyruvate carboxylase 0.65 GEMAOFIL_04430 3-oxoacyl-[acyl-carrier-protein] synthase 2 0.55 85
Pseudomonas fluorescens FW300-N2E2 0.49 Pf6N2E2_3103 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) 0.62 Pf6N2E2_5954 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.179)
Pseudomonas fluorescens GW456-L13 0.48 PfGW456L13_4740 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) 0.62 PfGW456L13_2107 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.179) low > 87
Pseudomonas sp. DMC3 0.48 GFF2023 Phosphoenolpyruvate carboxylase 0.63 GFF4755 3-oxoacyl-[acyl-carrier-protein] synthase 2 low > 89
Pseudomonas syringae pv. syringae B728a ΔmexB 0.48 Psyr_1318 Phosphoenolpyruvate carboxylase 0.63 Psyr_1649 3-oxoacyl-[acyl-carrier-protein] synthase II
Pseudomonas putida KT2440 0.48 PP_1505 Phosphoenolpyruvate carboxylase 0.67 PP_1916 beta-ketoacyl-ACP synthase II / 3-oxo-cis-vaccenoyl-[acp] synthase / FabF / KASII / acetoacetyl-[acp] synthase
Pseudomonas syringae pv. syringae B728a 0.48 Psyr_1318 Phosphoenolpyruvate carboxylase 0.63 Psyr_1649 3-oxoacyl-[acyl-carrier-protein] synthase II
Pseudomonas sp. S08-1 0.48 OH686_06795 Phosphoenolpyruvate carboxylase 0.67 OH686_22150 beta-ketoacyl-acyl-carrier-protein synthase II low > 80
Pseudomonas sp. BP01 0.47 JOY50_RS26030 ppc phosphoenolpyruvate carboxylase 0.67 JOY50_RS16780 fabF beta-ketoacyl-ACP synthase II low > 84
Azospirillum sp. SherDot2 0.25 MPMX19_06050 Phosphoenolpyruvate carboxylase 0.51 MPMX19_00940 3-oxoacyl-[acyl-carrier-protein] synthase 2
Dechlorosoma suillum PS 0.25 Dsui_1603 phosphoenolpyruvate carboxylase 0.62 Dsui_2450 beta-ketoacyl-acyl-carrier-protein synthase II
Rhodopseudomonas palustris CGA009 0.25 TX73_009115 phosphoenolpyruvate carboxylase 0.50 TX73_015890 beta-ketoacyl-ACP synthase II
Xanthobacter sp. DMC5 0.24 GFF2267 Phosphoenolpyruvate carboxylase 0.48 GFF3535 3-oxoacyl-[acyl-carrier-protein] synthase 2
Ralstonia sp. UNC404CL21Col 0.23 ABZR87_RS16140 phosphoenolpyruvate carboxylase 0.61 ABZR87_RS10155 beta-ketoacyl-ACP synthase II
Ralstonia solanacearum GMI1000 0.23 RS_RS11840 phosphoenolpyruvate carboxylase 0.61 RS_RS05220 beta-ketoacyl-[acyl-carrier-protein] synthase II
Hydrogenophaga sp. GW460-11-11-14-LB1 0.23 GFF115 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) 0.61 GFF3337 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.179)
Xanthomonas campestris pv. campestris strain 8004 0.23 Xcc-8004.4314.1 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) 0.55 Xcc-8004.3993.1 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.179)
Ralstonia solanacearum PSI07 0.23 RPSI07_RS13100 phosphoenolpyruvate carboxylase 0.61 RPSI07_RS19020 beta-ketoacyl-[acyl-carrier-protein] synthase II
Herbaspirillum seropedicae SmR1 0.23 HSERO_RS14670 phosphoenolpyruvate carboxylase 0.59 HSERO_RS09615 3-oxoacyl-ACP synthase
Acidovorax sp. GW101-3H11 0.23 Ac3H11_3553 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) 0.55 Ac3H11_1576 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.179)
Ralstonia solanacearum IBSBF1503 0.23 RALBFv3_RS04250 phosphoenolpyruvate carboxylase 0.61 RALBFv3_RS14440 beta-ketoacyl-[acyl-carrier-protein] synthase II
Ralstonia solanacearum UW163 0.23 UW163_RS09420 phosphoenolpyruvate carboxylase 0.61 UW163_RS11905 beta-ketoacyl-[acyl-carrier-protein] synthase II
Rhodanobacter sp. FW510-T8 0.22 OKGIIK_11820 ppc phosphoenolpyruvate carboxylase 0.63 OKGIIK_05725 fabF beta-ketoacyl-ACP synthase II
Paraburkholderia bryophila 376MFSha3.1 0.22 H281DRAFT_00197 Phosphoenolpyruvate carboxylase, type 1 0.59 H281DRAFT_04353 3-oxoacyl-[acyl-carrier-protein] synthase II
Paraburkholderia graminis OAS925 0.22 ABIE53_001314 phosphoenolpyruvate carboxylase 0.59 ABIE53_003045 3-oxoacyl-[acyl-carrier-protein] synthase II
Burkholderia phytofirmans PsJN 0.22 BPHYT_RS05225 phosphoenolpyruvate carboxylase 0.61 BPHYT_RS14415 3-oxoacyl-ACP synthase
Variovorax sp. SCN45 0.22 GFF3838 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) 0.60 GFF3861 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.179)
Synechocystis sp000284455 PCC 6803 0.22 SGL_RS11290 phosphoenolpyruvate carboxylase 0.51 SGL_RS05665 beta-ketoacyl-ACP synthase II
Sphingomonas koreensis DSMZ 15582 0.22 Ga0059261_2719 Phosphoenolpyruvate carboxylase, type 1 (EC 4.1.1.31) 0.50 Ga0059261_0362 beta-ketoacyl-acyl-carrier-protein synthase II
Methylophilus sp. DMC18 0.22 GFF771 Phosphoenolpyruvate carboxylase 0.58 GFF1269 3-oxoacyl-[acyl-carrier-protein] synthase 2
Variovorax sp. OAS795 0.22 ABID97_RS08220 phosphoenolpyruvate carboxylase 0.60 ABID97_RS08320 beta-ketoacyl-ACP synthase II
Cupriavidus basilensis FW507-4G11 0.22 RR42_RS15905 phosphoenolpyruvate carboxylase 0.59 RR42_RS14090 3-oxoacyl-ACP synthase
Synechococcus elongatus PCC 7942 0.21 Synpcc7942_2252 ppc phosphoenolpyruvate carboxylase 0.52 Synpcc7942_0537 fabF 3-oxoacyl-(acyl carrier protein) synthase II
Dyella japonica UNC79MFTsu3.2 0.21 ABZR86_RS11555 phosphoenolpyruvate carboxylase 0.66 ABZR86_RS06160 beta-ketoacyl-ACP synthase II
Lysobacter sp. OAE881 0.21 ABIE51_RS18965 phosphoenolpyruvate carboxylase 0.56 ABIE51_RS13935 beta-ketoacyl-ACP synthase II
Paraburkholderia sabiae LMG 24235 0.21 QEN71_RS24955 phosphoenolpyruvate carboxylase 0.63 QEN71_RS04565 beta-ketoacyl-ACP synthase II
Rhodanobacter denitrificans MT42 0.21 LRK55_RS11810 phosphoenolpyruvate carboxylase 0.63 LRK55_RS00950 beta-ketoacyl-ACP synthase II
Castellaniella sp019104865 MT123 0.21 ABCV34_RS14805 phosphoenolpyruvate carboxylase 0.56 ABCV34_RS08360 beta-ketoacyl-ACP synthase II
Rhodanobacter denitrificans FW104-10B01 0.21 LRK54_RS12075 phosphoenolpyruvate carboxylase 0.63 LRK54_RS01175 beta-ketoacyl-ACP synthase II
Rhodanobacter sp000427505 FW510-R12 0.21 LRK53_RS16490 phosphoenolpyruvate carboxylase 0.63 LRK53_RS08895 beta-ketoacyl-ACP synthase II
Sphingobium sp. HT1-2 0.21 GFF5056 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) 0.50 GFF1543 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.179)
Brevundimonas sp. GW460-12-10-14-LB2 0.20 A4249_RS12510 phosphoenolpyruvate carboxylase 0.51 A4249_RS06790 beta-ketoacyl-ACP synthase II
Caulobacter crescentus NA1000 0.19 CCNA_01560 phosphoenolpyruvate carboxylase 0.54 CCNA_01750 3-oxoacyl-(acyl-carrier-protein) synthase II
Caulobacter crescentus NA1000 Δfur 0.19 CCNA_01560 phosphoenolpyruvate carboxylase 0.54 CCNA_01750 3-oxoacyl-(acyl-carrier-protein) synthase II
Echinicola vietnamensis KMM 6221, DSM 17526 0.12 Echvi_3727 Phosphoenolpyruvate carboxylase 0.46 Echvi_2314 beta-ketoacyl-acyl-carrier-protein synthase II low > 79
Pontibacter actiniarum KMM 6156, DSM 19842 0.12 CA264_05530 phosphoenolpyruvate carboxylase 0.44 CA264_00740 beta-ketoacyl-[acyl-carrier-protein] synthase II
Cellulophaga baltica 18 0.12 M666_RS09030 phosphoenolpyruvate carboxylase 0.44 M666_RS04085 beta-ketoacyl-ACP synthase II
Pedobacter sp. GW460-11-11-14-LB5 0.10 CA265_RS21350 phosphoenolpyruvate carboxylase 0.44 CA265_RS09880 beta-ketoacyl-[acyl-carrier-protein] synthase II low > 88
Mucilaginibacter yixingensis YX-36 DSM 26809 0.10 ABZR88_RS09465 phosphoenolpyruvate carboxylase 0.43 ABZR88_RS01605 beta-ketoacyl-ACP synthase II

Not shown: 4 genomes with orthologs for CSW01_13390 only; 20 genomes with orthologs for CSW01_10085 only