Conservation of cofitness between CSW01_05290 and CSW01_04915 in Vibrio cholerae E7946 ATCC 55056

92 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_05290 cob(I)yrinic acid a,c-diamide adenosyltransferase 1.0 CSW01_04915 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.63 20
Escherichia coli ECOR27 0.72 NOLOHH_20290 cobO cob(I)yrinic acid a,c-diamide adenosyltransferase 0.79 NOLOHH_23605 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 76
Escherichia coli ECRC62 0.72 BNILDI_18440 cobO cob(I)yrinic acid a,c-diamide adenosyltransferase 0.79 BNILDI_21610 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 75
Escherichia fergusonii Becca 0.72 EFB2_02657 Corrinoid adenosyltransferase 0.79 EFB2_03438 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase low > 86
Escherichia coli BL21 0.72 ECD_01246 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.79 ECD_00629 tRNA-i(6)A37 methylthiotransferase low > 61
Escherichia coli Nissle 1917 0.72 ECOLIN_RS07640 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.79 ECOLIN_RS03555 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
Escherichia coli HS(pFamp)R (ATCC 700891) 0.72 OHPLBJKB_02414 Cob(I)yrinic acid a,c-diamide adenosyltransferase 0.79 OHPLBJKB_03051 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase low > 74
Escherichia coli BW25113 0.72 b1270 btuR cob(I)yrinic acid a,c-diamide adenosyltransferase (NCBI) 0.79 b0661 miaB isopentenyl-adenosine A37 tRNA methylthiolase (NCBI) low > 76
Escherichia coli ECRC100 0.71 OKFHMN_02625 cobO cob(I)yrinic acid a,c-diamide adenosyltransferase 0.79 OKFHMN_07225 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 79
Escherichia coli ECRC102 0.71 NIAGMN_26795 cobO cob(I)yrinic acid a,c-diamide adenosyltransferase 0.79 NIAGMN_05280 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 80
Escherichia coli ECRC99 0.71 KEDOAH_26140 cobO cob(I)yrinic acid a,c-diamide adenosyltransferase 0.79 KEDOAH_20745 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
Escherichia coli ECOR38 0.71 HEPCGN_25575 cobO cob(I)yrinic acid a,c-diamide adenosyltransferase 0.79 HEPCGN_01005 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 88
Escherichia coli ECRC101 0.71 MCAODC_15640 cobO cob(I)yrinic acid a,c-diamide adenosyltransferase 0.79 MCAODC_26440 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 87
Escherichia coli ECRC98 0.71 JDDGAC_05170 cobO cob(I)yrinic acid a,c-diamide adenosyltransferase 0.79 JDDGAC_10870 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 87
Rahnella sp. WP5 0.70 EX31_RS09915 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.76 EX31_RS23205 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 89
Klebsiella michiganensis M5al 0.70 BWI76_RS11900 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.79 BWI76_RS08135 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
Pectobacterium carotovorum WPP14 0.70 HER17_RS10895 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.81 HER17_RS15165 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.69 GFF2718 Cob(I)alamin adenosyltransferase (EC 2.5.1.17) 0.79 GFF4579 tRNA-i(6)A37 methylthiotransferase low > 78
Shewanella amazonensis SB2B 0.69 Sama_0766 cob(I)yrinic acid a,c-diamide adenosyltransferase (RefSeq) 0.79 Sama_2575 tRNA-i(6)A37 modification enzyme MiaB (RefSeq) low > 62
Shewanella sp. ANA-3 0.69 Shewana3_3274 cob(I)yrinic acid a,c-diamide adenosyltransferase (RefSeq) 0.78 Shewana3_1008 tRNA-i(6)A37 thiotransferase enzyme MiaB (RefSeq) low > 73
Pantoea agglomerans CFBP13505 P0401 0.69 PagCFBP13505_RS06970 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.80 PagCFBP13505_RS03360 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 74
Pantoea sp. MT58 0.69 IAI47_09215 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.79 IAI47_13945 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 76
Shewanella loihica PV-4 0.68 Shew_0718 cob(I)yrinic acid a,c-diamide adenosyltransferase (RefSeq) 0.78 Shew_2923 tRNA-i(6)A37 thiotransferase enzyme MiaB (RefSeq) low > 60
Enterobacter sp. TBS_079 0.68 MPMX20_02506 Corrinoid adenosyltransferase 0.76 MPMX20_01311 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase low > 85
Enterobacter asburiae PDN3 0.68 EX28DRAFT_0941 cob(I)alamin adenosyltransferase 0.77 EX28DRAFT_2310 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB low > 76
Serratia liquefaciens MT49 0.67 IAI46_13990 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.78 IAI46_06025 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 87
Dickeya dadantii 3937 0.67 DDA3937_RS10505 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.82 DDA3937_RS06250 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 74
Shewanella oneidensis MR-1 0.67 SO1039 cobO cob(I)alamin adenosyltransferase (NCBI ptt file) 0.78 SO1181 miaB tRNA-i(6)A37 modification enzyme MiaB (NCBI ptt file) low > 76
Dickeya dianthicola ME23 0.67 DZA65_RS10985 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.82 DZA65_RS06640 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 75
Dickeya dianthicola 67-19 0.67 HGI48_RS10505 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.82 HGI48_RS06295 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 71
Klebsiella pneumoniae MKP103 0.63 KDGMDA_19595 cob(I)yrinic acid a c-diamide adenosyltransferase 0.79 KDGMDA_16495 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 95
Cupriavidus basilensis FW507-4G11 0.52 RR42_RS16125 Cob(I)yrinic acid a,c-diamide adenosyltransferase 0.59 RR42_RS02855 dimethylallyladenosine tRNA methylthiotransferase low > 128
Pseudomonas sp. DMC3 0.51 GFF2547 Corrinoid adenosyltransferase 0.63 GFF3900 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase
Pseudomonas sp. S08-1 0.51 OH686_04990 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.64 OH686_09215 tRNA-i(6)A37 thiotransferase enzyme MiaB low > 80
Pseudomonas fluorescens FW300-N2E2 0.51 Pf6N2E2_5737 Cob(I)alamin adenosyltransferase (EC 2.5.1.17) 0.63 Pf6N2E2_5018 tRNA-i(6)A37 methylthiotransferase
Pseudomonas fluorescens FW300-N2E3 0.51 AO353_02640 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.63 AO353_06375 (dimethylallyl)adenosine tRNA methylthiotransferase low > 101
Pseudomonas stutzeri RCH2 0.50 Psest_3014 cob(I)alamin adenosyltransferase 0.64 Psest_0532 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB low > 67
Pseudomonas lactucae CFBP13502 0.49 GEMAOFIL_04210 Corrinoid adenosyltransferase 0.63 GEMAOFIL_05078 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase low > 96
Pseudomonas fluorescens GW456-L13 0.49 PfGW456L13_4243 Cob(I)alamin adenosyltransferase (EC 2.5.1.17) 0.63 PfGW456L13_1380 tRNA-i(6)A37 methylthiotransferase low > 87
Pseudomonas simiae WCS417 0.49 PS417_20065 Cob(I)yrinic acid a,c-diamide adenosyltransferase 0.63 PS417_24625 (dimethylallyl)adenosine tRNA methylthiotransferase
Pseudomonas fluorescens FW300-N2C3 0.49 AO356_19135 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.63 AO356_15410 (dimethylallyl)adenosine tRNA methylthiotransferase low > 104
Xanthomonas campestris pv. campestris strain 8004 0.49 Xcc-8004.1393.1 Cob(I)alamin adenosyltransferase (EC 2.5.1.17) 0.63 Xcc-8004.2224.1 tRNA-i(6)A37 methylthiotransferase low > 74
Pseudomonas fluorescens SBW25 0.48 PFLU_RS22030 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.63 PFLU_RS26555 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
Pseudomonas segetis P6 0.48 MPMX49_01816 Corrinoid adenosyltransferase 0.62 MPMX49_01071 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase low > 75
Pseudomonas aeruginosa MRSN321 0.48 DY961_RS06050 cobO;go_function=corrinoid cob(I)yrinic acid a c-diamide adenosyltransferase 0.64 DY961_RS12950 miaB;go_function=transferase tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 100
Pseudomonas aeruginosa PUPa3 0.48 DQ20_RS46730 cobO;go_function=corrinoid cob(I)yrinic acid a c-diamide adenosyltransferase 0.64 DQ20_RS48275 miaB;go_function=transferase tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 101
Pseudomonas fluorescens SBW25-INTG 0.48 PFLU_RS22030 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.63 PFLU_RS26555 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 109
Pseudomonas aeruginosa PA14 0.48 IKLFDK_06030 cob(I)yrinic acid a c-diamide adenosyltransferase 0.64 IKLFDK_20540 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
Pseudomonas sp. SVBP6 0.48 COO64_RS07250 cobO cob(I)yrinic acid a,c-diamide adenosyltransferase 0.63 COO64_RS15510 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 93
Methylophilus sp. DMC18 0.48 GFF1478 Corrinoid adenosyltransferase 0.52 GFF2710 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase low > 43
Pseudomonas orientalis W4I3 0.48 QF045_RS22180 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.62 QF045_RS26910 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 93
Pseudomonas sp. RS175 0.48 PFR28_03209 Corrinoid adenosyltransferase 0.63 PFR28_03848 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase low > 88
Pseudomonas fluorescens FW300-N1B4 0.48 Pf1N1B4_3706 Cob(I)alamin adenosyltransferase (EC 2.5.1.17) 0.63 Pf1N1B4_2712 tRNA-i(6)A37 methylthiotransferase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.47 Psyr_3681 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.64 Psyr_4345 tRNA-i(6)A37 thiotransferase enzyme MiaB low > 86
Pseudomonas syringae pv. syringae B728a 0.47 Psyr_3681 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.64 Psyr_4345 tRNA-i(6)A37 thiotransferase enzyme MiaB low > 86
Rhodanobacter sp. FW510-T8 0.47 OKGIIK_05480 cobO cob(I)yrinic acid a,c-diamide adenosyltransferase 0.63 OKGIIK_02990 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 53
Ralstonia sp. UNC404CL21Col 0.47 ABZR87_RS00080 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.59 ABZR87_RS07780 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 80
Dechlorosoma suillum PS 0.46 Dsui_0532 cob(I)alamin adenosyltransferase 0.61 Dsui_1194 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB low > 51
Lysobacter sp. OAE881 0.45 ABIE51_RS04945 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.63 ABIE51_RS15455 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 62
Dyella japonica UNC79MFTsu3.2 0.45 ABZR86_RS10920 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.64 ABZR86_RS09895 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 74
Sinorhizobium meliloti 1021 0.44 SMc04302 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.42 SMc01115 (dimethylallyl)adenosine tRNA methylthiotransferase
Sphingobium sp. HT1-2 0.43 GFF877 Cob(I)alamin adenosyltransferase (EC 2.5.1.17) @ Cob(I)alamin adenosyltransferase (EC 2.5.1.17), clustered with cobalamin synthesis 0.39 GFF3937 tRNA-i(6)A37 methylthiotransferase (EC 2.8.4.3) low > 95
Rhodospirillum rubrum S1H 0.43 Rru_A3367 Cob(I)alamin adenosyltransferase (NCBI) 0.42 Rru_A3770 tRNA-i(6)A37 modification enzyme MiaB (NCBI) low > 58
Bosea sp. OAE506 0.42 ABIE41_RS01765 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.41 ABIE41_RS04495 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
Phaeobacter inhibens DSM 17395 0.42 PGA1_c08200 cob(I)yrinic acid a,c-diamide adenosyltransferase CobO 0.41 PGA1_c04710 (dimethylallyl)adenosine tRNA methylthiotransferase MiaB
Paraburkholderia bryophila 376MFSha3.1 0.41 H281DRAFT_06529 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.59 H281DRAFT_04239 tRNA-i(6)A37 thiotransferase enzyme MiaB low > 103
Rhizobium sp. OAE497 0.41 ABIE40_RS11150 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.41 ABIE40_RS01705 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 107
Ralstonia solanacearum PSI07 0.41 RPSI07_RS02200 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.59 RPSI07_RS21380 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 81
Sphingomonas koreensis DSMZ 15582 0.41 Ga0059261_0621 cob(I)yrinic acid a,c-diamide adenosyltransferase (EC 2.5.1.17) 0.36 Ga0059261_1604 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB low > 68
Ralstonia solanacearum GMI1000 0.41 RS_RS20065 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.59 RS_RS02645 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 80
Ralstonia solanacearum IBSBF1503 0.40 RALBFv3_RS20540 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.59 RALBFv3_RS11825 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 76
Dinoroseobacter shibae DFL-12 0.40 Dshi_0157 cob(I)alamin adenosyltransferase (RefSeq) 0.43 Dshi_1019 RNA modification enzyme, MiaB family (RefSeq)
Azospirillum brasilense Sp245 0.40 AZOBR_RS09840 cobinamide adenolsyltransferase 0.42 AZOBR_RS01475 (dimethylallyl)adenosine tRNA methylthiotransferase low > 97
Synechococcus elongatus PCC 7942 0.40 Synpcc7942_0957 cobO cob(I)yrinic acid a,c-diamide adenosyltransferase 0.34 Synpcc7942_2374 tRNA-i(6)A37 thiotransferase enzyme MiaB
Ralstonia solanacearum UW163 0.40 UW163_RS18635 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.59 UW163_RS01760 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
Burkholderia phytofirmans PsJN 0.40 BPHYT_RS24825 cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase 0.58 BPHYT_RS16535 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase
Paraburkholderia sabiae LMG 24235 0.40 QEN71_RS08695 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.59 QEN71_RS02195 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 153
Herbaspirillum seropedicae SmR1 0.39 HSERO_RS13260 cobinamide adenolsyltransferase 0.59 HSERO_RS03615 (dimethylallyl)adenosine tRNA methylthiotransferase low > 78
Synechocystis sp000284455 PCC 6803 0.39 SGL_RS08905 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.35 SGL_RS04845 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
Rhodopseudomonas palustris CGA009 0.38 TX73_003710 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.38 TX73_002325 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 86
Agrobacterium fabrum C58 0.37 Atu2807 cob(I)alamin adenosyltransferase 0.41 Atu0356 miaB protein low > 89
Azospirillum sp. SherDot2 0.36 MPMX19_01024 Corrinoid adenosyltransferase 0.44 MPMX19_02511 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase
Magnetospirillum magneticum AMB-1 0.36 AMB_RS22645 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.44 AMB_RS22585 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase
Xanthobacter sp. DMC5 0.36 GFF371 Corrinoid adenosyltransferase 0.44 GFF3719 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase
Hydrogenophaga sp. GW460-11-11-14-LB1 0.34 GFF3983 Cob(I)alamin adenosyltransferase (EC 2.5.1.17) 0.59 GFF613 tRNA-i(6)A37 methylthiotransferase low > 90
Variovorax sp. SCN45 0.33 GFF444 Cob(I)alamin adenosyltransferase (EC 2.5.1.17) @ Cob(I)alamin adenosyltransferase (EC 2.5.1.17), clustered with cobalamin synthesis 0.60 GFF7320 tRNA-i(6)A37 methylthiotransferase (EC 2.8.4.3) low > 127
Variovorax sp. OAS795 0.32 ABID97_RS17395 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.59 ABID97_RS06475 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 91
Acidovorax sp. GW101-3H11 0.32 Ac3H11_994 Cob(I)alamin adenosyltransferase (EC 2.5.1.17) 0.59 Ac3H11_4008 tRNA-i(6)A37 methylthiotransferase low > 79
Mycobacterium tuberculosis H37Rv 0.29 Rv2849c Probable cob(I)alamin adenosyltransferase CobO (corrinoid adenosyltransferase) (corrinoid adotransferase activity) 0.34 Rv2733c Conserved hypothetical alanine, arginine-rich protein low > 58
Fusobacterium nucleatum SB010 0.27 HUW76_00780 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.33 HUW76_07655 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 35
Desulfovibrio vulgaris Miyazaki F 0.25 DvMF_0199 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP (RefSeq) 0.31 DvMF_1330 RNA modification enzyme, MiaB family (RefSeq) low > 51
Bacteroides ovatus ATCC 8483 0.24 BACOVA_04737 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.32 BACOVA_02895 tRNA-i(6)A37 thiotransferase enzyme MiaB low > 96
Desulfovibrio vulgaris Hildenborough JW710 0.22 DVU1403 cobO cob(I)alamin adenosyltransferase (TIGR) 0.30 DVU0984 miaB tRNA-i(6)A37 modification enzyme MiaB (TIGR) low > 55

Not shown: 3 genomes with orthologs for CSW01_05290 only; 28 genomes with orthologs for CSW01_04915 only