| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_02415 | | tRNA (guanosine(46)-N7)-methyltransferase TrmB | 1.0 | CSW01_04590 | | transcriptional regulator GcvA | 0.52 | 4 |
| Shewanella loihica PV-4 | 0.71 | Shew_1124 | trmB | tRNA (guanine-N(7))-methyltransferase (RefSeq) | 0.71 | Shew_2764 | | DNA-binding transcriptional activator GcvA (RefSeq) | — | — |
| Erwinia amylovora T8 | 0.70 | OLJFJH_08500 | | tRNA (guanosine(46)-N7)-methyltransferase TrmB | 0.72 | OLJFJH_09170 | | Glycine cleavage system transcriptional activator | low | > 58 |
| Shewanella sp. ANA-3 | 0.70 | Shewana3_1182 | trmB | tRNA (guanine-N(7)-)-methyltransferase (RefSeq) | 0.71 | Shewana3_2894 | | DNA-binding transcriptional activator GcvA (RefSeq) | — | — |
| Shewanella oneidensis MR-1 | 0.70 | SO3367 | | conserved hypothetical protein TIGR00091 (NCBI ptt file) | 0.70 | SO1533 | | glycine cleavage system transcriptional activator, putative (NCBI ptt file) | low | > 76 |
| Escherichia coli ECRC101 | 0.70 | MCAODC_09725 | trmB | tRNA (guanosine(46)-N7)-methyltransferase TrmB | 0.72 | MCAODC_10645 | gcvA | glycine cleavage system transcriptional regulator GcvA | low | > 87 |
| Escherichia coli ECRC99 | 0.70 | KEDOAH_08935 | trmB | tRNA (guanosine(46)-N7)-methyltransferase TrmB | 0.72 | KEDOAH_08010 | gcvA | glycine cleavage system transcriptional regulator GcvA | — | — |
| Escherichia coli ECRC98 | 0.70 | JDDGAC_22835 | trmB | tRNA (guanosine(46)-N7)-methyltransferase TrmB | 0.72 | JDDGAC_23785 | gcvA | glycine cleavage system transcriptional regulator GcvA | low | > 86 |
| Pantoea sp. MT58 | 0.70 | IAI47_03565 | | tRNA (guanosine(46)-N7)-methyltransferase TrmB | 0.71 | IAI47_04025 | | transcriptional regulator GcvA | low | > 76 |
| Escherichia coli ECRC102 | 0.70 | NIAGMN_16970 | trmB | tRNA (guanosine(46)-N7)-methyltransferase TrmB | 0.72 | NIAGMN_17890 | gcvA | glycine cleavage system transcriptional regulator GcvA | — | — |
| Escherichia coli ECRC100 | 0.70 | OKFHMN_19205 | trmB | tRNA (guanosine(46)-N7)-methyltransferase TrmB | 0.72 | OKFHMN_20120 | gcvA | glycine cleavage system transcriptional regulator GcvA | low | > 80 |
| Escherichia coli BW25113 | 0.70 | b2960 | yggH | tRNA(m7G46)-methyltransferase (NCBI) | 0.72 | b2808 | gcvA | DNA-binding transcriptional dual regulator (NCBI) | low | > 76 |
| Escherichia coli ECOR27 | 0.70 | NOLOHH_11065 | trmB | tRNA (guanosine(46)-N7)-methyltransferase TrmB | 0.72 | NOLOHH_12000 | gcvA | glycine cleavage system transcriptional regulator GcvA | low | > 75 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.70 | OHPLBJKB_00756 | | tRNA (guanine-N(7)-)-methyltransferase | 0.72 | OHPLBJKB_00923 | | Glycine cleavage system transcriptional activator | low | > 73 |
| Escherichia coli ECRC62 | 0.70 | BNILDI_09650 | trmB | tRNA (guanosine(46)-N7)-methyltransferase TrmB | 0.72 | BNILDI_10505 | gcvA | glycine cleavage system transcriptional regulator GcvA | low | > 75 |
| Escherichia coli BL21 | 0.70 | ECD_02790 | | tRNA m(7)G46 methyltransferase, SAM-dependent | 0.72 | ECD_02659 | | glycine cleavage system transcriptional activator; autorepressor | low | > 61 |
| Serratia liquefaciens MT49 | 0.69 | IAI46_21460 | | tRNA (guanosine(46)-N7)-methyltransferase TrmB | 0.72 | IAI46_20340 | | transcriptional regulator GcvA | low | > 86 |
| Escherichia fergusonii Becca | 0.69 | EFB2_00942 | | tRNA (guanine-N(7)-)-methyltransferase | 0.72 | EFB2_01109 | | Glycine cleavage system transcriptional activator | low | > 86 |
| Escherichia coli Nissle 1917 | 0.69 | ECOLIN_RS16465 | | tRNA (guanosine(46)-N7)-methyltransferase TrmB | 0.72 | ECOLIN_RS15650 | | glycine cleavage system transcriptional regulator GcvA | low | > 55 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.69 | GFF3064 | | tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) | 0.73 | GFF4865 | | Glycine cleavage system transcriptional activator GcvA | low | > 78 |
| Escherichia coli ECOR38 | 0.69 | HEPCGN_18475 | trmB | tRNA (guanosine(46)-N7)-methyltransferase TrmB | 0.72 | HEPCGN_19375 | gcvA | glycine cleavage system transcriptional regulator GcvA | low | > 87 |
| Erwinia tracheiphila SCR3 | 0.69 | LU632_RS05425 | trmB | tRNA (guanosine(46)-N7)-methyltransferase TrmB | 0.71 | LU632_RS06255 | | transcriptional regulator GcvA | low | > 74 |
| Shewanella amazonensis SB2B | 0.69 | Sama_2489 | trmB | tRNA (guanine-N(7)-)-methyltransferase (RefSeq) | 0.72 | Sama_2429 | | DNA-binding transcriptional activator GcvA (RefSeq) | low | > 62 |
| Enterobacter asburiae PDN3 | 0.69 | EX28DRAFT_2997 | | tRNA (guanine-N(7)-)-methyltransferase | 0.71 | EX28DRAFT_2883 | | Transcriptional regulator | low | > 76 |
| Dickeya dadantii 3937 | 0.69 | DDA3937_RS04905 | | tRNA (guanosine(46)-N7)-methyltransferase TrmB | 0.71 | DDA3937_RS05050 | | transcriptional regulator GcvA | low | > 74 |
| Enterobacter sp. TBS_079 | 0.69 | MPMX20_03817 | | tRNA (guanine-N(7)-)-methyltransferase | 0.71 | MPMX20_03671 | | Glycine cleavage system transcriptional activator | low | > 85 |
| Klebsiella michiganensis M5al | 0.68 | BWI76_RS24150 | | tRNA (guanosine(46)-N7)-methyltransferase TrmB | 0.71 | BWI76_RS22955 | | transcriptional regulator GcvA | low | > 92 |
| Dickeya dianthicola ME23 | 0.68 | DZA65_RS05250 | | tRNA (guanosine(46)-N7)-methyltransferase TrmB | 0.71 | DZA65_RS05390 | | transcriptional regulator GcvA | low | > 75 |
| Dickeya dianthicola 67-19 | 0.68 | HGI48_RS04915 | | tRNA (guanosine(46)-N7)-methyltransferase TrmB | 0.71 | HGI48_RS05050 | | transcriptional regulator GcvA | low | > 71 |
| Pectobacterium carotovorum WPP14 | 0.67 | HER17_RS16620 | | tRNA (guanosine(46)-N7)-methyltransferase TrmB | 0.71 | HER17_RS16415 | | transcriptional regulator GcvA | low | > 75 |
| Alteromonas macleodii MIT1002 | 0.66 | MIT1002_00237 | | tRNA (guanine-N(7)-)-methyltransferase | 0.65 | MIT1002_01520 | | Gcv operon activator | low | > 70 |
| Rahnella sp. WP5 | 0.66 | EX31_RS02730 | | tRNA (guanosine(46)-N7)-methyltransferase TrmB | 0.72 | EX31_RS13110 | | transcriptional regulator GcvA | low | > 89 |
| Kangiella aquimarina DSM 16071 | 0.60 | B158DRAFT_0203 | | tRNA (guanine-N(7)-)-methyltransferase | 0.53 | B158DRAFT_0909 | | Transcriptional regulator | low | > 40 |
| Pseudomonas sp. RS175 | 0.56 | PFR28_04251 | | tRNA (guanine-N(7)-)-methyltransferase | 0.31 | PFR28_04727 | | Glycine cleavage system transcriptional activator | low | > 88 |
| Pseudomonas putida KT2440 | 0.56 | PP_5103 | | tRNA (guanine-N(7)-)-methyltransferase | 0.30 | PP_0661 | | putative Transcriptional regulator AmpR | low | > 96 |
| Pseudomonas sp. BP01 | 0.56 | JOY50_RS20865 | trmB | tRNA (guanosine(46)-N7)-methyltransferase TrmB | 0.30 | JOY50_RS09180 | | LysR family transcriptional regulator | low | > 84 |
| Pseudomonas fluorescens SBW25 | 0.56 | PFLU_RS28415 | | tRNA (guanosine(46)-N7)-methyltransferase TrmB | 0.30 | PFLU_RS25165 | | LysR family transcriptional regulator | low | > 109 |
| Pseudomonas sp. DMC3 | 0.56 | GFF218 | | tRNA (guanine-N(7)-)-methyltransferase | 0.29 | GFF687 | | Glycine cleavage system transcriptional activator | low | > 89 |
| Pseudomonas fluorescens SBW25-INTG | 0.56 | PFLU_RS28415 | | tRNA (guanosine(46)-N7)-methyltransferase TrmB | 0.30 | PFLU_RS25165 | | LysR family transcriptional regulator | low | > 109 |
| Pseudomonas fluorescens GW456-L13 | 0.55 | PfGW456L13_1001 | | tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) | 0.29 | PfGW456L13_555 | | Glycine cleavage system transcriptional activator | low | > 87 |
| Pseudomonas fluorescens FW300-N2E2 | 0.55 | Pf6N2E2_4591 | | tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) | 0.37 | Pf6N2E2_1560 | | Glycine cleavage system transcriptional activator GcvA | low | > 103 |
| Pseudomonas sp. SVBP6 | 0.55 | COO64_RS12955 | trmB | tRNA (guanosine(46)-N7)-methyltransferase TrmB | 0.34 | COO64_RS14470 | gcvA | transcriptional regulator GcvA | low | > 93 |
| Pseudomonas fluorescens FW300-N2C3 | 0.55 | AO356_13380 | | tRNA (guanine-N7)-methyltransferase | 0.31 | AO356_15125 | | LysR family transcriptional regulator | low | > 104 |
| Pseudomonas fluorescens FW300-N1B4 | 0.55 | Pf1N1B4_2332 | | tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) | 0.30 | Pf1N1B4_1817 | | Glycine cleavage system transcriptional activator | — | — |
| Pseudomonas simiae WCS417 | 0.55 | PS417_26770 | | tRNA (guanine-N7)-methyltransferase | 0.30 | PS417_23350 | | LysR family transcriptional regulator | low | > 88 |
| Pseudomonas fluorescens FW300-N2E3 | 0.55 | AO353_08210 | | tRNA (guanine-N7)-methyltransferase | 0.29 | AO353_15505 | | LysR family transcriptional regulator | low | > 101 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.55 | Psyr_4739 | | tRNA (guanine-N(7)-)-methyltransferase | 0.29 | Psyr_5015 | | transcriptional regulator, LysR family | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.55 | Psyr_4739 | | tRNA (guanine-N(7)-)-methyltransferase | 0.29 | Psyr_5015 | | transcriptional regulator, LysR family | low | > 86 |
| Pseudomonas aeruginosa PA14 | 0.54 | IKLFDK_23515 | | tRNA (guanosine(46)-N7)-methyltransferase TrmB | 0.31 | IKLFDK_23190 | | LysR family transcriptional regulator | low | > 101 |
| Pseudomonas sp. S08-1 | 0.54 | OH686_14290 | | tRNA (guanine-N(7)-)-methyltransferase | 0.31 | OH686_11695 | | Transcriptional regulator, LysR family | low | > 80 |
| Pseudomonas stutzeri RCH2 | 0.53 | Psest_0268 | | tRNA (guanine-N(7)-)-methyltransferase | 0.30 | Psest_2739 | | Transcriptional regulator | low | > 67 |
| Marinobacter adhaerens HP15 | 0.53 | HP15_278 | | tRNA (guanine-N(7)-)-methyltransferase | 0.24 | HP15_1669 | | transcriptional regulator, LysR family protein | low | > 73 |
| Paraburkholderia sabiae LMG 24235 | 0.49 | QEN71_RS03220 | | tRNA (guanosine(46)-N7)-methyltransferase TrmB | 0.32 | QEN71_RS01310 | | transcriptional regulator GcvA | low | > 153 |
| Paraburkholderia graminis OAS925 | 0.49 | ABIE53_003260 | | tRNA (guanine-N7-)-methyltransferase | 0.37 | ABIE53_001336 | | LysR family glycine cleavage system transcriptional activator | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.49 | H281DRAFT_04036 | | tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) | 0.31 | H281DRAFT_02051 | | LysR family transcriptional regulator, glycine cleavage system transcriptional activator | low | > 103 |
| Cupriavidus basilensis FW507-4G11 | 0.48 | RR42_RS15625 | | tRNA (guanine-N7)-methyltransferase | 0.31 | RR42_RS34190 | | LysR family transcriptional regulator | low | > 128 |
| Burkholderia phytofirmans PsJN | 0.48 | BPHYT_RS15470 | | tRNA (guanine-N(7)-)-methyltransferase | 0.34 | BPHYT_RS11810 | | LysR family transcriptional regulator | low | > 109 |
| Ralstonia sp. UNC404CL21Col | 0.46 | ABZR87_RS08805 | | tRNA (guanosine(46)-N7)-methyltransferase TrmB | 0.34 | ABZR87_RS01495 | | transcriptional regulator GcvA | low | > 80 |
| Ralstonia solanacearum UW163 | 0.46 | UW163_RS00810 | | tRNA (guanosine(46)-N7)-methyltransferase TrmB | 0.32 | UW163_RS22635 | | transcriptional regulator GcvA | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.46 | RALBFv3_RS12755 | | tRNA (guanosine(46)-N7)-methyltransferase TrmB | 0.32 | RALBFv3_RS22095 | | transcriptional regulator GcvA | low | > 76 |
| Ralstonia solanacearum PSI07 | 0.46 | RPSI07_RS20505 | | tRNA (guanosine(46)-N7)-methyltransferase TrmB | 0.33 | RPSI07_RS11375 | | transcriptional regulator GcvA | low | > 81 |
| Ralstonia solanacearum GMI1000 | 0.45 | RS_RS03535 | | tRNA (guanosine(46)-N7)-methyltransferase TrmB | 0.35 | RS_RS13815 | | transcriptional regulator GcvA | low | > 80 |
| Dechlorosoma suillum PS | 0.45 | Dsui_1016 | | tRNA (guanine-N(7)-)-methyltransferase | 0.27 | Dsui_2033 | | transcriptional regulator | low | > 51 |
| Herbaspirillum seropedicae SmR1 | 0.45 | HSERO_RS02470 | | tRNA (guanine-N7)-methyltransferase | 0.28 | HSERO_RS07925 | | LysR family transcriptional regulator | low | > 78 |
| Variovorax sp. SCN45 | 0.45 | GFF593 | | tRNA (guanine(46)-N(7))-methyltransferase (EC 2.1.1.33) | 0.32 | GFF1355 | | Transcriptional regulator, LysR family | low | > 127 |
| Variovorax sp. OAS795 | 0.44 | ABID97_RS18030 | | tRNA (guanosine(46)-N7)-methyltransferase TrmB | 0.31 | ABID97_RS29015 | | transcriptional regulator GcvA | low | > 91 |
| Rhodanobacter sp. FW510-T8 | 0.44 | OKGIIK_11900 | trmB | tRNA (guanosine(46)-N7)-methyltransferase TrmB | 0.18 | OKGIIK_16180 | | Biotin transporter BioY | low | > 52 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.44 | Xcc-8004.1283.1 | | tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) | 0.22 | Xcc-8004.1418.1 | | Glycine cleavage system transcriptional activator | — | — |
| Acidovorax sp. GW101-3H11 | 0.43 | Ac3H11_4163 | | tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) | 0.28 | Ac3H11_902 | | Glycine cleavage system transcriptional activator | — | — |
| Castellaniella sp019104865 MT123 | 0.43 | ABCV34_RS08995 | | tRNA (guanosine(46)-N7)-methyltransferase TrmB | 0.27 | ABCV34_RS01790 | | LysR substrate-binding domain-containing protein | low | > 48 |
| Rhodanobacter denitrificans MT42 | 0.43 | LRK55_RS11710 | | tRNA (guanosine(46)-N7)-methyltransferase TrmB | 0.27 | LRK55_RS06375 | | transcriptional regulator GcvA | low | > 63 |
| Rhodanobacter sp000427505 FW510-R12 | 0.43 | LRK53_RS16550 | | tRNA (guanosine(46)-N7)-methyltransferase TrmB | 0.26 | LRK53_RS10360 | | LysR substrate-binding domain-containing protein | low | > 60 |
| Rhodanobacter denitrificans FW104-10B01 | 0.43 | LRK54_RS11985 | | tRNA (guanosine(46)-N7)-methyltransferase TrmB | 0.27 | LRK54_RS06630 | | transcriptional regulator GcvA | low | > 59 |
| Dyella japonica UNC79MFTsu3.2 | 0.43 | ABZR86_RS11650 | | tRNA (guanosine(46)-N7)-methyltransferase TrmB | 0.33 | ABZR86_RS20860 | | transcriptional regulator GcvA | low | > 74 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.42 | GFF5184 | | tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) | 0.28 | GFF4407 | | Glycine cleavage system transcriptional activator | low | > 90 |
| Lysobacter sp. OAE881 | 0.42 | ABIE51_RS16550 | | tRNA (guanosine(46)-N7)-methyltransferase TrmB | 0.26 | ABIE51_RS00605 | | LysR substrate-binding domain-containing protein | low | > 62 |
| Acinetobacter radioresistens SK82 | 0.40 | MPMX26_01105 | | tRNA (guanine-N(7)-)-methyltransferase | 0.27 | MPMX26_01927 | | Glycine cleavage system transcriptional activator | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.24 | Ga0059261_1620 | | Predicted S-adenosylmethionine-dependent methyltransferase | 0.31 | Ga0059261_4130 | | Transcriptional regulator | low | > 68 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.23 | A4249_RS13980 | | tRNA (guanosine(46)-N7)-methyltransferase TrmB | 0.36 | A4249_RS09680 | | transcriptional regulator GcvA | low | > 48 |
| Dinoroseobacter shibae DFL-12 | 0.19 | Dshi_1021 | | tRNA (guanine-N(7)-)-methyltransferase (RefSeq) | 0.25 | Dshi_3068 | | transcriptional regulator, LysR family (RefSeq) | low | > 64 |
| Rhizobium sp. OAE497 | 0.18 | ABIE40_RS01670 | | tRNA (guanosine(46)-N7)-methyltransferase TrmB | 0.30 | ABIE40_RS01615 | | transcriptional regulator GcvA | low | > 107 |
| Magnetospirillum magneticum AMB-1 | 0.17 | AMB_RS22620 | | tRNA (guanosine(46)-N7)-methyltransferase TrmB | 0.30 | AMB_RS04220 | | transcriptional regulator GcvA | low | > 64 |
| Agrobacterium fabrum C58 | 0.17 | Atu0363 | | putative tRNA (guanine-N(7)-)-methyltransferase | 0.34 | Atu2078 | | transcriptional regulator, LysR family | low | > 89 |
| Rhodopseudomonas palustris CGA009 | 0.16 | TX73_002295 | | tRNA (guanine(46)-N(7))-methyltransferase TrmB | 0.23 | TX73_013680 | | LysR substrate-binding domain-containing protein | low | > 86 |
| Azospirillum sp. SherDot2 | 0.16 | MPMX19_02518 | | tRNA (guanine-N(7)-)-methyltransferase | 0.44 | MPMX19_01055 | | Glycine cleavage system transcriptional activator | low | > 112 |
| Sinorhizobium meliloti 1021 | 0.15 | SMc01108 | | tRNA (guanine-N(7)-)-methyltransferase | 0.28 | SMa0179 | | LysR family transcriptional regulator | low | > 103 |
| Azospirillum brasilense Sp245 | 0.13 | AZOBR_RS01440 | | tRNA (guanine-N(7)-)-methyltransferase | 0.39 | AZOBR_RS20105 | | transcriptional regulator | — | — |
Not shown: 3 genomes with orthologs for CSW01_02415 only; 7 genomes with orthologs for CSW01_04590 only