| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_00160 | | ATP-dependent protease | 1.0 | CSW01_01810 | | tRNA epoxyqueuosine(34) reductase QueG | 0.50 | 7 |
| Serratia liquefaciens MT49 | 0.65 | IAI46_24375 | | YifB family Mg chelatase-like AAA ATPase | 0.67 | IAI46_01595 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 86 |
| Pectobacterium carotovorum WPP14 | 0.62 | HER17_RS01050 | | YifB family Mg chelatase-like AAA ATPase | 0.68 | HER17_RS02555 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 75 |
| Rahnella sp. WP5 | 0.61 | EX31_RS14980 | | YifB family Mg chelatase-like AAA ATPase | 0.66 | EX31_RS08850 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 89 |
| Dickeya dadantii 3937 | 0.61 | DDA3937_RS20180 | | YifB family Mg chelatase-like AAA ATPase | 0.69 | DDA3937_RS18645 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 74 |
| Dickeya dianthicola 67-19 | 0.61 | HGI48_RS20325 | | YifB family Mg chelatase-like AAA ATPase | 0.68 | HGI48_RS18575 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 71 |
| Dickeya dianthicola ME23 | 0.60 | DZA65_RS21365 | | YifB family Mg chelatase-like AAA ATPase | 0.68 | DZA65_RS19710 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 75 |
| Escherichia coli ECRC62 | 0.59 | BNILDI_04725 | yifB | YifB family Mg chelatase-like AAA ATPase | 0.67 | BNILDI_06940 | queG | tRNA epoxyqueuosine(34) reductase QueG | low | > 75 |
| Escherichia coli BL21 | 0.59 | ECD_03644 | | magnesium chelatase family protein and putative transcriptional regulator | 0.67 | ECD_04033 | | epoxyqueuosine reductase, cobalamine-stimulated; queosine biosynthesis | low | > 61 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.59 | GFF2905 | | MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein | 0.67 | GFF819 | | Epoxyqueuosine (oQ) reductase QueG | low | > 78 |
| Escherichia coli BW25113 | 0.59 | b3765 | yifB | predicted bifunctional enzyme and transcriptional regulator (RefSeq) | 0.67 | b4166 | yjeS | predicted Fe-S electron transport protein (NCBI) | low | > 76 |
| Escherichia coli ECOR27 | 0.59 | NOLOHH_06800 | yifB | YifB family Mg chelatase-like AAA ATPase | 0.67 | NOLOHH_04550 | queG | tRNA epoxyqueuosine(34) reductase QueG | low | > 75 |
| Escherichia coli ECRC101 | 0.59 | MCAODC_05170 | yifB | YifB family Mg chelatase-like AAA ATPase | 0.67 | MCAODC_02800 | queG | tRNA epoxyqueuosine(34) reductase QueG | low | > 87 |
| Escherichia coli ECRC102 | 0.59 | NIAGMN_12420 | yifB | YifB family Mg chelatase-like AAA ATPase | 0.67 | NIAGMN_10135 | queG | tRNA epoxyqueuosine(34) reductase QueG | — | — |
| Escherichia coli ECRC98 | 0.59 | JDDGAC_18285 | yifB | YifB family Mg chelatase-like AAA ATPase | 0.67 | JDDGAC_15925 | queG | tRNA epoxyqueuosine(34) reductase QueG | low | > 86 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.59 | OHPLBJKB_04286 | | Competence protein ComM | 0.67 | OHPLBJKB_03876 | | Epoxyqueuosine reductase | low | > 73 |
| Escherichia fergusonii Becca | 0.59 | EFB2_04869 | | Competence protein ComM | 0.67 | EFB2_04369 | | Epoxyqueuosine reductase | low | > 86 |
| Escherichia coli ECRC100 | 0.59 | OKFHMN_14665 | yifB | YifB family Mg chelatase-like AAA ATPase | 0.67 | OKFHMN_12285 | queG | tRNA epoxyqueuosine(34) reductase QueG | low | > 80 |
| Pantoea sp. MT58 | 0.59 | IAI47_01010 | | YifB family Mg chelatase-like AAA ATPase | 0.70 | IAI47_02560 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 76 |
| Klebsiella michiganensis M5al | 0.58 | BWI76_RS00950 | | ATP-dependent protease | 0.66 | BWI76_RS02505 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 92 |
| Enterobacter sp. TBS_079 | 0.58 | MPMX20_04503 | | Competence protein ComM | 0.65 | MPMX20_00447 | | Epoxyqueuosine reductase | low | > 85 |
| Enterobacter asburiae PDN3 | 0.57 | EX28DRAFT_4438 | | Mg chelatase-related protein | 0.66 | EX28DRAFT_3363 | | epoxyqueuosine reductase | low | > 76 |
| Escherichia coli ECRC99 | 0.55 | KEDOAH_13485 | yifB | YifB family Mg chelatase-like AAA ATPase | 0.67 | KEDOAH_15870 | queG | tRNA epoxyqueuosine(34) reductase QueG | — | — |
| Shewanella oneidensis MR-1 | 0.55 | SO0349 | | magnesium chelatase family protein (NCBI ptt file) | 0.63 | SO3861 | | iron-sulfur cluster-binding protein (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.55 | Shewana3_3820 | | Mg chelatase, subunit ChlI (RefSeq) | 0.64 | Shewana3_0745 | | putative iron-sulfur cluster binding protein (RefSeq) | low | > 73 |
| Shewanella loihica PV-4 | 0.54 | Shew_0283 | | Mg chelatase, subunit ChlI (RefSeq) | 0.64 | Shew_2979 | | putative iron-sulfur cluster binding protein (RefSeq) | low | > 60 |
| Shewanella amazonensis SB2B | 0.53 | Sama_3288 | | magnesium chelatase family protein (RefSeq) | 0.61 | Sama_2625 | | iron-sulfur cluster-binding protein (RefSeq) | low | > 62 |
| Kangiella aquimarina DSM 16071 | 0.52 | B158DRAFT_0343 | | Mg chelatase-related protein | 0.48 | B158DRAFT_0486 | | iron-sulfur cluster binding protein, putative | low | > 40 |
| Rhodanobacter sp000427505 FW510-R12 | 0.52 | LRK53_RS03370 | | YifB family Mg chelatase-like AAA ATPase | 0.54 | LRK53_RS13485 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 60 |
| Rhodanobacter denitrificans FW104-10B01 | 0.52 | LRK54_RS10575 | | YifB family Mg chelatase-like AAA ATPase | 0.53 | LRK54_RS15130 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.52 | LRK55_RS10215 | | YifB family Mg chelatase-like AAA ATPase | 0.53 | LRK55_RS14845 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 63 |
| Lysobacter sp. OAE881 | 0.52 | ABIE51_RS00155 | | YifB family Mg chelatase-like AAA ATPase | 0.51 | ABIE51_RS08045 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 62 |
| Dyella japonica UNC79MFTsu3.2 | 0.51 | ABZR86_RS13495 | | YifB family Mg chelatase-like AAA ATPase | 0.54 | ABZR86_RS00835 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 74 |
| Marinobacter adhaerens HP15 | 0.51 | HP15_277 | | Mg-chelatase subunits D/I family, ComM subfamily protein | 0.50 | HP15_2505 | | iron-sulfur cluster binding protein | low | > 73 |
| Alteromonas macleodii MIT1002 | 0.51 | MIT1002_04043 | | Competence protein ComM | 0.63 | MIT1002_03794 | | Epoxyqueuosine reductase | low | > 70 |
| Rhodanobacter sp. FW510-T8 | 0.51 | OKGIIK_13330 | yifB | YifB family Mg chelatase-like AAA ATPase | 0.52 | OKGIIK_03900 | queG | tRNA epoxyqueuosine(34) reductase QueG | low | > 52 |
| Pseudomonas aeruginosa PA14 | 0.51 | IKLFDK_27000 | | YifB family Mg chelatase-like AAA ATPase | 0.55 | IKLFDK_28790 | | tRNA epoxyqueuosine(34) reductase QueG | 0.38 | 47 |
| Pseudomonas sp. RS175 | 0.50 | PFR28_04386 | | Competence protein ComM | 0.54 | PFR28_05115 | | Epoxyqueuosine reductase | low | > 88 |
| Methylophilus sp. DMC18 | 0.50 | GFF2220 | | Competence protein ComM | 0.52 | GFF1249 | | Epoxyqueuosine reductase | low | > 43 |
| Pseudomonas fluorescens FW300-N2E2 | 0.50 | Pf6N2E2_4404 | | MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein | 0.54 | Pf6N2E2_3620 | | Epoxyqueuosine (oQ) reductase QueG | low | > 103 |
| Pseudomonas fluorescens SBW25-INTG | 0.50 | PFLU_RS29320 | | YifB family Mg chelatase-like AAA ATPase | 0.55 | PFLU_RS02540 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.50 | PFLU_RS29320 | | YifB family Mg chelatase-like AAA ATPase | 0.55 | PFLU_RS02540 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 109 |
| Pseudomonas simiae WCS417 | 0.50 | PS417_27635 | | magnesium chelatase | 0.54 | PS417_02460 | | epoxyqueuosine reductase | low | > 88 |
| Pseudomonas fluorescens FW300-N2E3 | 0.50 | AO353_09090 | | magnesium chelatase | 0.54 | AO353_13115 | | epoxyqueuosine reductase | low | > 101 |
| Pseudomonas sp. BP01 | 0.50 | JOY50_RS22645 | | YifB family Mg chelatase-like AAA ATPase | 0.54 | JOY50_RS17200 | queG | tRNA epoxyqueuosine(34) reductase QueG | low | > 84 |
| Pseudomonas sp. SVBP6 | 0.50 | COO64_RS01305 | | YifB family Mg chelatase-like AAA ATPase | 0.54 | COO64_RS17870 | queG | tRNA epoxyqueuosine(34) reductase QueG | low | > 93 |
| Ralstonia sp. UNC404CL21Col | 0.50 | ABZR87_RS06675 | | YifB family Mg chelatase-like AAA ATPase | 0.50 | ABZR87_RS00775 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 80 |
| Pseudomonas fluorescens FW300-N2C3 | 0.50 | AO356_12685 | | magnesium chelatase | 0.54 | AO356_08685 | | epoxyqueuosine reductase | low | > 104 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.49 | Xcc-8004.4916.1 | | MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein | 0.50 | Xcc-8004.2252.1 | | Epoxyqueuosine (oQ) reductase QueG | low | > 74 |
| Pseudomonas sp. S08-1 | 0.49 | OH686_13745 | | AAA+ ATPase superfamily protein YifB/ComM, associated with DNA recombination | 0.55 | OH686_09500 | | epoxyqueuosine reductase | low | > 80 |
| Ralstonia solanacearum IBSBF1503 | 0.49 | RALBFv3_RS10825 | | ATP-dependent protease | 0.49 | RALBFv3_RS05120 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 76 |
| Ralstonia solanacearum UW163 | 0.49 | UW163_RS02755 | | ATP-dependent protease | 0.49 | UW163_RS08505 | | tRNA epoxyqueuosine(34) reductase QueG | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.49 | PfGW456L13_835 | | MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein | 0.54 | PfGW456L13_160 | | Epoxyqueuosine (oQ) reductase QueG | low | > 87 |
| Pseudomonas fluorescens FW300-N1B4 | 0.49 | Pf1N1B4_2162 | | MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein | 0.54 | Pf1N1B4_1418 | | Epoxyqueuosine (oQ) reductase QueG | low | > 87 |
| Cupriavidus basilensis FW507-4G11 | 0.49 | RR42_RS01740 | | ATP-dependent protease | 0.48 | RR42_RS03405 | | epoxyqueuosine reductase | low | > 128 |
| Ralstonia solanacearum PSI07 | 0.49 | RPSI07_RS22485 | | ATP-dependent protease | 0.49 | RPSI07_RS12175 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 81 |
| Pseudomonas stutzeri RCH2 | 0.49 | Psest_3775 | | Mg chelatase-related protein | 0.57 | Psest_0677 | | iron-sulfur cluster binding protein, putative | low | > 67 |
| Pseudomonas sp. DMC3 | 0.48 | GFF378 | | Competence protein ComM | 0.55 | GFF3214 | | Epoxyqueuosine reductase | low | > 89 |
| Ralstonia solanacearum GMI1000 | 0.48 | RS_RS01665 | | ATP-dependent protease | 0.49 | RS_RS12740 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 80 |
| Herbaspirillum seropedicae SmR1 | 0.48 | HSERO_RS00405 | | Fis family transcriptional regulator | 0.52 | HSERO_RS04220 | | epoxyqueuosine reductase | low | > 78 |
| Acidovorax sp. GW101-3H11 | 0.48 | Ac3H11_3404 | | MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein | 0.49 | Ac3H11_306 | | Epoxyqueuosine (oQ) reductase QueG | low | > 79 |
| Pseudomonas putida KT2440 | 0.47 | PP_5239 | | putative ATP-dependent chelatase | 0.54 | PP_4900 | | epoxyqueuosine reductase | low | > 96 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.47 | Psyr_0197 | | Mg chelatase-related protein | 0.56 | Psyr_0566 | | 4Fe-4S cluster binding protein | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.47 | Psyr_0197 | | Mg chelatase-related protein | 0.56 | Psyr_0566 | | 4Fe-4S cluster binding protein | low | > 86 |
| Variovorax sp. OAS795 | 0.45 | ABID97_RS03620 | | YifB family Mg chelatase-like AAA ATPase | 0.49 | ABID97_RS20285 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 91 |
| Acinetobacter radioresistens SK82 | 0.45 | MPMX26_00147 | | Competence protein ComM | 0.47 | MPMX26_01783 | | Epoxyqueuosine reductase | low | > 36 |
| Escherichia coli ECOR38 | 0.44 | HEPCGN_13375 | yifB | YifB family Mg chelatase-like AAA ATPase | 0.67 | HEPCGN_10515 | queG | tRNA epoxyqueuosine(34) reductase QueG | low | > 87 |
| Paraburkholderia sabiae LMG 24235 | 0.44 | QEN71_RS01390 | | YifB family Mg chelatase-like AAA ATPase | 0.49 | QEN71_RS02745 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 153 |
| Paraburkholderia graminis OAS925 | 0.42 | ABIE53_000652 | | magnesium chelatase family protein | 0.50 | ABIE53_003363 | | epoxyqueuosine reductase | low | > 113 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.42 | GFF1924 | | MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein | 0.49 | GFF5474 | | Epoxyqueuosine (oQ) reductase QueG | low | > 90 |
| Burkholderia phytofirmans PsJN | 0.42 | BPHYT_RS02535 | | magnesium chelatase subunit ChlI | 0.50 | BPHYT_RS15960 | | iron-sulfur cluster binding protein | low | > 109 |
| Cellulophaga baltica 18 | 0.40 | M666_RS14865 | | YifB family Mg chelatase-like AAA ATPase | 0.31 | M666_RS07680 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 67 |
| Xanthobacter sp. DMC5 | 0.39 | GFF2248 | | Competence protein ComM | 0.32 | GFF3718 | | Epoxyqueuosine reductase | — | — |
| Synechococcus elongatus PCC 7942 | 0.39 | Synpcc7942_1391 | comM | Mg chelatase-related protein | 0.29 | Synpcc7942_0530 | | 4Fe-4S cluster binding | low | > 38 |
| Variovorax sp. SCN45 | 0.39 | GFF6347 | | AAA+ ATPase superfamily protein YifB/ComM, associated with DNA recombination | 0.47 | GFF4805 | | Epoxyqueuosine reductase (EC 1.17.99.6) QueG | low | > 127 |
| Rhizobium sp. OAE497 | 0.38 | ABIE40_RS01410 | | YifB family Mg chelatase-like AAA ATPase | 0.32 | ABIE40_RS01310 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 107 |
| Parabacteroides merdae CL09T00C40 | 0.38 | HMPREF1078_RS07245 | | YifB family Mg chelatase-like AAA ATPase | 0.26 | HMPREF1078_RS06835 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 61 |
| Castellaniella sp019104865 MT123 | 0.38 | ABCV34_RS04755 | | YifB family Mg chelatase-like AAA ATPase | 0.48 | ABCV34_RS13905 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 48 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.38 | Echvi_1735 | | Mg chelatase-related protein | 0.31 | Echvi_0824 | | iron-sulfur cluster binding protein, putative | low | > 79 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.37 | ABZR88_RS19740 | | YifB family Mg chelatase-like AAA ATPase | 0.30 | ABZR88_RS07975 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 71 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.37 | BT2846 | | magnesium chelatase, subunit ChlI (NCBI ptt file) | 0.25 | BT3245 | | putative iron-sulfur cluster-binding protein (NCBI ptt file) | low | > 81 |
| Dinoroseobacter shibae DFL-12 | 0.36 | Dshi_2828 | | Mg chelatase, subunit ChlI (RefSeq) | 0.32 | Dshi_3307 | | domain of unknown function DUF1730 (RefSeq) | low | > 64 |
| Sinorhizobium meliloti 1021 | 0.35 | SMc00420 | | hypothetical protein | 0.31 | SMc00406 | | 4Fe-4S ferredoxin | low | > 103 |
| Caulobacter crescentus NA1000 | 0.35 | CCNA_00139 | | magnesium chelatase subunit ChlI-like ATPase | 0.33 | CCNA_03753 | | iron-sulfur cluster-binding protein | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.35 | CCNA_00139 | | magnesium chelatase subunit ChlI-like ATPase | 0.33 | CCNA_03753 | | iron-sulfur cluster-binding protein | low | > 67 |
| Phaeobacter inhibens DSM 17395 | 0.35 | PGA1_c26700 | | putative magnesium chelatase | 0.31 | PGA1_c34310 | | Uncharacterized Fe-S protein | low | > 62 |
| Sphingomonas koreensis DSMZ 15582 | 0.34 | Ga0059261_0787 | | Mg chelatase-related protein | 0.31 | Ga0059261_1058 | | epoxyqueuosine reductase | low | > 68 |
| Rhodospirillum rubrum S1H | 0.34 | Rru_A3589 | | Mg chelatase-related protein (NCBI) | 0.33 | Rru_A0279 | | 4Fe-4S ferredoxin, iron-sulfur binding (NCBI) | low | > 58 |
Not shown: 15 genomes with orthologs for CSW01_00160 only; 7 genomes with orthologs for CSW01_01810 only