Conservation of cofitness between CSW01_13680 and CSW01_00650 in Vibrio cholerae E7946 ATCC 55056

93 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_13680 DNA helicase RecG 1.0 CSW01_00650 tyrosine recombinase XerC 0.73 11
Pantoea agglomerans CFBP13505 P0401 0.70 PagCFBP13505_RS18845 ATP-dependent DNA helicase RecG 0.53 PagCFBP13505_RS15380 tyrosine recombinase XerC — —
Pantoea sp. MT58 0.70 IAI47_00500 ATP-dependent DNA helicase RecG 0.53 IAI47_18400 tyrosine recombinase XerC 0.46 64
Serratia liquefaciens MT49 0.69 IAI46_24905 ATP-dependent DNA helicase RecG 0.55 IAI46_00725 tyrosine recombinase XerC 0.46 58
Klebsiella pneumoniae MKP103 0.69 KDGMDA_08135 ATP-dependent DNA helicase RecG 0.53 KDGMDA_09700 tyrosine recombinase XerC low > 95
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.69 GFF355 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.55 GFF239 Tyrosine recombinase XerC — —
Erwinia amylovora T8 0.69 OLJFJH_05550 ATP-dependent DNA helicase RecG 0.54 OLJFJH_06415 tyrosine recombinase XerC low > 58
Escherichia coli ECRC101 0.69 MCAODC_06055 recG ATP-dependent DNA helicase RecG 0.55 MCAODC_04925 xerC tyrosine recombinase XerC — —
Escherichia coli ECRC102 0.69 NIAGMN_13305 recG ATP-dependent DNA helicase RecG 0.55 NIAGMN_12175 xerC tyrosine recombinase XerC — —
Dickeya dadantii 3937 0.69 DDA3937_RS00170 ATP-dependent DNA helicase RecG 0.56 DDA3937_RS19890 tyrosine recombinase XerC — —
Escherichia coli ECRC99 0.69 KEDOAH_12600 recG ATP-dependent DNA helicase RecG 0.55 KEDOAH_13730 xerC tyrosine recombinase XerC — —
Escherichia coli ECRC98 0.69 JDDGAC_19170 recG ATP-dependent DNA helicase RecG 0.55 JDDGAC_18045 xerC tyrosine recombinase XerC — —
Escherichia coli ECRC100 0.69 OKFHMN_15545 recG ATP-dependent DNA helicase RecG 0.55 OKFHMN_14420 xerC tyrosine recombinase XerC low > 79
Escherichia coli ECOR38 0.68 HEPCGN_14365 recG ATP-dependent DNA helicase RecG 0.54 HEPCGN_13125 xerC tyrosine recombinase XerC 0.74 11
Escherichia coli ECOR27 0.68 NOLOHH_07425 recG ATP-dependent DNA helicase RecG 0.54 NOLOHH_06550 xerC tyrosine recombinase XerC low > 76
Escherichia fergusonii Becca 0.68 EFB2_00136 ATP-dependent DNA helicase RecG 0.54 EFB2_04826 Tyrosine recombinase XerC low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.68 OHPLBJKB_00049 ATP-dependent DNA helicase RecG 0.54 OHPLBJKB_04239 Tyrosine recombinase XerC low > 74
Escherichia coli ECRC62 0.68 BNILDI_04090 recG ATP-dependent DNA helicase RecG 0.54 BNILDI_04985 xerC tyrosine recombinase XerC low > 75
Escherichia coli BL21 0.68 ECD_03509 ATP-dependent DNA helicase 0.55 ECD_03687 site-specific tyrosine recombinase 0.53 38
Escherichia coli BW25113 0.68 b3652 recG ATP-dependent DNA helicase (NCBI) 0.54 b3811 xerC site-specific tyrosine recombinase XerC (NCBI) low > 76
Escherichia coli Nissle 1917 0.68 ECOLIN_RS20800 ATP-dependent DNA helicase RecG 0.54 ECOLIN_RS21875 tyrosine recombinase XerC 0.66 7
Klebsiella michiganensis M5al 0.68 BWI76_RS27440 DNA helicase RecG 0.55 BWI76_RS01210 tyrosine recombinase XerC low > 92
Enterobacter sp. TBS_079 0.68 MPMX20_00084 ATP-dependent DNA helicase RecG 0.52 MPMX20_04465 Tyrosine recombinase XerC 0.36 31
Dickeya dianthicola ME23 0.68 DZA65_RS22160 ATP-dependent DNA helicase RecG 0.56 DZA65_RS21090 tyrosine recombinase XerC low > 75
Dickeya dianthicola 67-19 0.68 HGI48_RS21190 ATP-dependent DNA helicase RecG 0.56 HGI48_RS20045 tyrosine recombinase XerC low > 71
Pectobacterium carotovorum WPP14 0.68 HER17_RS21395 ATP-dependent DNA helicase RecG 0.54 HER17_RS01350 tyrosine recombinase XerC low > 75
Enterobacter asburiae PDN3 0.67 EX28DRAFT_3901 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.54 EX28DRAFT_4480 tyrosine recombinase XerC — —
Erwinia tracheiphila HP pepo 2.2 0.67 IJEDHG_08345 recG ATP-dependent DNA helicase RecG 0.53 IJEDHG_08780 xerC tyrosine recombinase XerC — —
Erwinia tracheiphila SCR3 0.67 LU632_RS22190 recG ATP-dependent DNA helicase RecG 0.53 LU632_RS24135 xerC tyrosine recombinase XerC — —
Rahnella sp. WP5 0.67 EX31_RS15820 ATP-dependent DNA helicase RecG 0.56 EX31_RS15165 tyrosine recombinase XerC low > 89
Shewanella amazonensis SB2B 0.65 Sama_3375 ATP-dependent DNA helicase RecG (RefSeq) 0.47 Sama_3247 integrase/recombinase XerC (RefSeq) 0.49 9
Shewanella loihica PV-4 0.65 Shew_3507 ATP-dependent DNA helicase RecG (RefSeq) 0.44 Shew_0325 tyrosine recombinase XerC (RefSeq) low > 60
Shewanella sp. ANA-3 0.65 Shewana3_0348 ATP-dependent DNA helicase RecG (RefSeq) 0.47 Shewana3_0393 tyrosine recombinase XerC (RefSeq) 0.47 24
Alteromonas macleodii MIT1002 0.64 MIT1002_00111 ATP-dependent DNA helicase RecG 0.45 MIT1002_00157 Tyrosine recombinase XerC low > 70
Shewanella oneidensis MR-1 0.64 SO4364 recG ATP-dependent DNA helicase RecG (NCBI ptt file) 0.47 SO4306 xerC integrase/recombinase XerC (NCBI ptt file) 0.70 2
Pseudomonas segetis P6 0.57 MPMX49_00040 ATP-dependent DNA helicase RecG 0.40 MPMX49_04536 Tyrosine recombinase XerC — —
Pseudomonas stutzeri RCH2 0.57 Psest_4192 ATP-dependent DNA helicase RecG 0.40 Psest_3767 tyrosine recombinase XerC — —
Pseudomonas sp. BP01 0.56 JOY50_RS08945 recG ATP-dependent DNA helicase RecG 0.39 JOY50_RS22610 xerC tyrosine recombinase XerC low > 84
Pseudomonas sp. S08-1 0.56 OH686_13505 ATP-dependent DNA helicase RecG 0.38 OH686_13785 tyrosine recombinase XerC low > 80
Pseudomonas putida KT2440 0.56 PP_5310 junction-specific ATP-dependent DNA helicase 0.39 PP_5230 Tyrosine recombinase XerC 0.46 18
Pseudomonas aeruginosa PA14 0.55 IKLFDK_26730 ATP-dependent DNA helicase RecG 0.40 IKLFDK_27050 tyrosine recombinase XerC low > 100
Pseudomonas fluorescens FW300-N1B4 0.55 Pf1N1B4_2105 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.38 Pf1N1B4_2171 Tyrosine recombinase XerC low > 87
Pseudomonas fluorescens GW456-L13 0.55 PfGW456L13_772 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.38 PfGW456L13_842 Tyrosine recombinase XerC low > 87
Pseudomonas sp. RS175 0.55 PFR28_04435 ATP-dependent DNA helicase RecG 0.38 PFR28_04378 Tyrosine recombinase XerC low > 88
Pseudomonas simiae WCS417 0.55 PS417_27870 ATP-dependent DNA helicase RecG 0.34 PS417_27595 recombinase XerC low > 88
Pseudomonas sp. DMC3 0.55 GFF427 ATP-dependent DNA helicase RecG 0.38 GFF370 Tyrosine recombinase XerC 0.52 88
Pseudomonas fluorescens FW300-N2E2 0.55 Pf6N2E2_4352 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.38 Pf6N2E2_4416 Tyrosine recombinase XerC 0.65 1
Pseudomonas lactucae CFBP13502 0.55 GEMAOFIL_00042 ATP-dependent DNA helicase RecG 0.37 GEMAOFIL_05657 Tyrosine recombinase XerC low > 93
Marinobacter adhaerens HP15 0.55 HP15_309 DNA helicase, ATP-dependent, RecG 0.44 HP15_250 site-specific tyrosine recombinase XerC low > 73
Pseudomonas fluorescens SBW25 0.55 PFLU_RS29550 ATP-dependent DNA helicase RecG 0.34 PFLU_RS29280 tyrosine recombinase XerC low > 109
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS29550 ATP-dependent DNA helicase RecG 0.34 PFLU_RS29280 tyrosine recombinase XerC 0.40 18
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_12380 ATP-dependent DNA helicase RecG 0.38 AO356_12725 recombinase XerC 0.68 1
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_09320 ATP-dependent DNA helicase RecG 0.38 AO353_09050 recombinase XerC 0.51 11
Pseudomonas syringae pv. syringae B728a ΔmexB 0.55 Psyr_0201 ATP-dependent DNA helicase RecG 0.39 Psyr_0185 tyrosine recombinase XerC subunit low > 86
Pseudomonas syringae pv. syringae B728a 0.55 Psyr_0201 ATP-dependent DNA helicase RecG 0.39 Psyr_0185 tyrosine recombinase XerC subunit 0.45 11
Pseudomonas sp. SVBP6 0.55 COO64_RS01595 recG ATP-dependent DNA helicase RecG 0.39 COO64_RS01270 xerC tyrosine recombinase XerC low > 93
Lysobacter sp. OAE881 0.53 ABIE51_RS17230 ATP-dependent DNA helicase RecG 0.38 ABIE51_RS03035 tyrosine recombinase XerC 0.82 8
Rhodanobacter sp000427505 FW510-R12 0.52 LRK53_RS16735 ATP-dependent DNA helicase RecG 0.37 LRK53_RS02315 tyrosine recombinase XerC low > 59
Xanthomonas campestris pv. campestris strain 8004 0.51 Xcc-8004.1204.1 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.40 Xcc-8004.847.1 Site-specific tyrosine recombinase — —
Rhodanobacter denitrificans MT42 0.51 LRK55_RS11530 ATP-dependent DNA helicase RecG 0.38 LRK55_RS08300 tyrosine recombinase XerC low > 63
Dyella japonica UNC79MFTsu3.2 0.51 ABZR86_RS11840 ATP-dependent DNA helicase RecG 0.37 ABZR86_RS15025 tyrosine recombinase XerC 0.75 20
Rhodanobacter denitrificans FW104-10B01 0.50 LRK54_RS11805 ATP-dependent DNA helicase RecG 0.37 LRK54_RS08535 tyrosine recombinase XerC low > 59
Rhodanobacter sp. FW510-T8 0.50 OKGIIK_12090 recG ATP-dependent DNA helicase RecG 0.37 OKGIIK_15325 xerC tyrosine recombinase XerC low > 53
Kangiella aquimarina DSM 16071 0.49 B158DRAFT_0566 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.45 B158DRAFT_0244 tyrosine recombinase XerC subunit 0.78 5
Cupriavidus basilensis FW507-4G11 0.45 RR42_RS17390 ATP-dependent DNA helicase RecG 0.31 RR42_RS00615 recombinase XerC 0.40 38
Methylophilus sp. DMC18 0.45 GFF2125 ATP-dependent DNA helicase RecG 0.40 GFF1535 Tyrosine recombinase XerC low > 43
Ralstonia solanacearum UW163 0.45 UW163_RS07950 DNA helicase RecG 0.33 UW163_RS03905 tyrosine recombinase XerC — —
Ralstonia solanacearum IBSBF1503 0.45 RALBFv3_RS05675 DNA helicase RecG 0.33 RALBFv3_RS09675 tyrosine recombinase XerC 0.34 37
Ralstonia solanacearum PSI07 0.45 RPSI07_RS11625 DNA helicase RecG 0.35 RPSI07_RS23690 tyrosine recombinase XerC low > 81
Ralstonia sp. UNC404CL21Col 0.45 ABZR87_RS01270 ATP-dependent DNA helicase RecG 0.34 ABZR87_RS05065 tyrosine recombinase XerC 0.65 6
Ralstonia solanacearum GMI1000 0.45 RS_RS13565 DNA helicase RecG 0.34 RS_RS00260 Tyrosine recombinase XerC 1 — —
Paraburkholderia graminis OAS925 0.44 ABIE53_000833 ATP-dependent DNA helicase RecG 0.33 ABIE53_000426 integrase/recombinase XerC — —
Burkholderia phytofirmans PsJN 0.44 BPHYT_RS03400 ATP-dependent DNA helicase RecG 0.36 BPHYT_RS01655 tyrosine recombinase XerC — —
Herbaspirillum seropedicae SmR1 0.44 HSERO_RS06165 ATP-dependent DNA helicase RecG 0.35 HSERO_RS21475 recombinase XerC low > 78
Paraburkholderia bryophila 376MFSha3.1 0.44 H281DRAFT_04672 ATP-dependent DNA helicase RecG 0.34 H281DRAFT_02202 integrase/recombinase XerC — —
Paraburkholderia sabiae LMG 24235 0.44 QEN71_RS26630 ATP-dependent DNA helicase RecG 0.35 QEN71_RS00355 tyrosine recombinase XerC — —
Acidovorax sp. GW101-3H11 0.44 Ac3H11_781 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.31 Ac3H11_1995 Tyrosine recombinase XerC low > 79
Dechlorosoma suillum PS 0.42 Dsui_0311 ATP-dependent DNA helicase RecG 0.37 Dsui_0651 tyrosine recombinase XerC low > 51
Castellaniella sp019104865 MT123 0.41 ABCV34_RS03570 ATP-dependent DNA helicase RecG 0.34 ABCV34_RS13455 tyrosine recombinase XerC 0.43 36
Variovorax sp. OAS795 0.41 ABID97_RS01575 ATP-dependent DNA helicase RecG 0.33 ABID97_RS06150 tyrosine recombinase XerC 0.69 1
Hydrogenophaga sp. GW460-11-11-14-LB1 0.40 GFF2802 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.31 GFF547 Tyrosine recombinase XerC low > 90
Variovorax sp. SCN45 0.38 GFF5538 ATP-dependent DNA helicase RecG (EC 3.6.4.12) 0.33 GFF4490 Site-specific tyrosine recombinase XerC low > 127
Rhizobium sp. OAE497 0.34 ABIE40_RS09300 ATP-dependent DNA helicase RecG 0.25 ABIE40_RS17950 tyrosine recombinase XerC low > 107
Magnetospirillum magneticum AMB-1 0.34 AMB_RS12400 ATP-dependent DNA helicase RecG 0.25 AMB_RS21485 tyrosine recombinase XerC — —
Phocaeicola vulgatus CL09T03C04 0.34 HMPREF1058_RS08295 ATP-dependent DNA helicase RecG 0.25 HMPREF1058_RS09445 tyrosine-type recombinase/integrase low > 67
Phocaeicola dorei CL03T12C01 0.33 ABI39_RS02470 ATP-dependent DNA helicase RecG 0.25 ABI39_RS03835 tyrosine-type recombinase/integrase — —
Azospirillum brasilense Sp245 0.33 AZOBR_RS09850 ATP-dependent DNA helicase RecG 0.23 AZOBR_RS03965 tyrosine recombinase XerC — —
Bacteroides stercoris CC31F 0.33 HMPREF1181_RS06615 ATP-dependent DNA helicase RecG 0.27 HMPREF1181_RS00625 tyrosine recombinase XerC low > 56
Bacteroides thetaiotaomicron VPI-5482 0.33 BT3924 ATP-dependent DNA helicase recG (NCBI ptt file) 0.29 BT2742 integrase, site-specific recombinase (NCBI ptt file) — —
Agrobacterium fabrum C58 0.33 Atu1780 ATP-dependent DNA helicase 0.24 Atu2628 site-specific recombinase — —
Fusobacterium nucleatum SB010 0.32 HUW76_01465 ATP-dependent DNA helicase RecG 0.16 HUW76_06795 tyrosine-type recombinase/integrase low > 35
Sphingomonas koreensis DSMZ 15582 0.31 Ga0059261_0958 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.22 Ga0059261_2764 Site-specific recombinase XerD 0.31 21
Bosea sp. OAE506 0.31 ABIE41_RS15815 ATP-dependent DNA helicase RecG 0.21 ABIE41_RS07870 tyrosine recombinase XerC 0.51 9
Rhodopseudomonas palustris CGA009 0.29 TX73_013795 ATP-dependent DNA helicase RecG 0.22 TX73_000945 tyrosine recombinase XerC low > 86

Not shown: 20 genomes with orthologs for CSW01_13680 only; 1 genomes with orthologs for CSW01_00650 only