Conservation of cofitness between BPHYT_RS15915 and BPHYT_RS33900 in Burkholderia phytofirmans PsJN

70 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS15915 ornithine carbamoyltransferase 1.0 BPHYT_RS33900 3-isopropylmalate dehydrogenase 0.93 5
Paraburkholderia bryophila 376MFSha3.1 0.97 H281DRAFT_04119 ornithine carbamoyltransferase 0.98 H281DRAFT_06072 3-isopropylmalate dehydrogenase 0.51 21
Paraburkholderia graminis OAS925 0.97 ABIE53_003354 ornithine carbamoyltransferase 0.98 ABIE53_004804 3-isopropylmalate dehydrogenase — —
Paraburkholderia sabiae LMG 24235 0.96 QEN71_RS02785 ornithine carbamoyltransferase 0.96 QEN71_RS17620 3-isopropylmalate dehydrogenase 0.79 54
Ralstonia solanacearum PSI07 0.80 RPSI07_RS12115 ornithine carbamoyltransferase 0.89 RPSI07_RS14705 3-isopropylmalate dehydrogenase — —
Ralstonia solanacearum GMI1000 0.79 RS_RS12805 ornithine carbamoyltransferase 0.89 RS_RS09990 3-isopropylmalate dehydrogenase — —
Ralstonia solanacearum UW163 0.79 UW163_RS08440 ornithine carbamoyltransferase 0.89 UW163_RS11115 3-isopropylmalate dehydrogenase — —
Ralstonia sp. UNC404CL21Col 0.79 ABZR87_RS00840 ornithine carbamoyltransferase 0.89 ABZR87_RS14530 3-isopropylmalate dehydrogenase — —
Ralstonia solanacearum IBSBF1503 0.79 RALBFv3_RS05185 ornithine carbamoyltransferase 0.89 RALBFv3_RS02610 3-isopropylmalate dehydrogenase — —
Cupriavidus basilensis FW507-4G11 0.77 RR42_RS17175 ornithine carbamoyltransferase 0.89 RR42_RS14385 3-isopropylmalate dehydrogenase — —
Variovorax sp. OAS795 0.73 ABID97_RS08630 ornithine carbamoyltransferase 0.79 ABID97_RS08455 3-isopropylmalate dehydrogenase — —
Herbaspirillum seropedicae SmR1 0.72 HSERO_RS07185 Ornithine carbamoyltransferase (EC 2.1.3.3) (from data) 0.86 HSERO_RS16500 3-isopropylmalate dehydrogenase — —
Variovorax sp. SCN45 0.71 GFF3926 Ornithine carbamoyltransferase (EC 2.1.3.3) 0.79 GFF3888 3-isopropylmalate dehydrogenase (EC 1.1.1.85) — —
Acidovorax sp. GW101-3H11 0.71 Ac3H11_1333 Ornithine carbamoyltransferase (EC 2.1.3.3) 0.79 Ac3H11_1528 3-isopropylmalate dehydrogenase (EC 1.1.1.85) — —
Dechlorosoma suillum PS 0.71 Dsui_3249 ornithine carbamoyltransferase 0.68 Dsui_3198 3-isopropylmalate dehydrogenase — —
Castellaniella sp019104865 MT123 0.71 ABCV34_RS05380 ornithine carbamoyltransferase 0.75 ABCV34_RS04280 3-isopropylmalate dehydrogenase low > 48
Hydrogenophaga sp. GW460-11-11-14-LB1 0.68 GFF3419 Ornithine carbamoyltransferase (EC 2.1.3.3) 0.77 GFF3360 3-isopropylmalate dehydrogenase (EC 1.1.1.85) — —
Acinetobacter radioresistens SK82 0.56 MPMX26_01287 Ornithine carbamoyltransferase 1, anabolic 0.59 MPMX26_00348 3-isopropylmalate dehydrogenase 0.77 18
Marinobacter adhaerens HP15 0.52 HP15_750 ornithine carbamoyltransferase 0.64 HP15_1832 3-isopropylmalate dehydrogenase — —
Pseudomonas simiae WCS417 0.51 PS417_05595 ornithine carbamoyltransferase 0.64 PS417_18585 3-isopropylmalate dehydrogenase 0.79 13
Pseudomonas fluorescens FW300-N2E3 0.51 AO353_04155 ornithine carbamoyltransferase 0.65 AO353_20635 3-isopropylmalate dehydrogenase 0.87 8
Pseudomonas fluorescens FW300-N1B4 0.51 Pf1N1B4_762 Ornithine carbamoyltransferase (EC 2.1.3.3) 0.65 Pf1N1B4_12 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.78 27
Pseudomonas fluorescens SBW25 0.51 PFLU_RS05680 ornithine carbamoyltransferase 0.63 PFLU_RS20565 3-isopropylmalate dehydrogenase — —
Pseudomonas fluorescens SBW25-INTG 0.51 PFLU_RS05680 ornithine carbamoyltransferase 0.63 PFLU_RS20565 3-isopropylmalate dehydrogenase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.50 Psyr_3901 ornithine carbamoyltransferase 0.63 Psyr_1985 3-isopropylmalate dehydrogenase — —
Pseudomonas sp. RS175 0.50 PFR28_03363 Ornithine carbamoyltransferase 1, anabolic 0.64 PFR28_02821 3-isopropylmalate dehydrogenase 0.59 17
Pseudomonas syringae pv. syringae B728a 0.50 Psyr_3901 ornithine carbamoyltransferase 0.63 Psyr_1985 3-isopropylmalate dehydrogenase — —
Pseudomonas fluorescens FW300-N2E2 0.50 Pf6N2E2_5579 Ornithine carbamoyltransferase (EC 2.1.3.3) 0.64 Pf6N2E2_66 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.74 18
Pseudomonas stutzeri RCH2 0.50 Psest_1291 ornithine carbamoyltransferase 0.63 Psest_2589 3-isopropylmalate dehydrogenase — —
Pseudomonas fluorescens FW300-N2C3 0.50 AO356_18275 ornithine carbamoyltransferase 0.64 AO356_21415 3-isopropylmalate dehydrogenase 0.92 18
Pseudomonas fluorescens GW456-L13 0.50 PfGW456L13_1739 Ornithine carbamoyltransferase (EC 2.1.3.3) 0.64 PfGW456L13_3945 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.93 4
Pseudomonas putida KT2440 0.49 PP_1079 Ornithine carbamoyltransferase 0.64 PP_1988 3-isopropylmalate dehydrogenase 0.84 10
Pseudomonas sp. S08-1 0.49 OH686_20405 ornithine carbamoyltransferase 0.62 OH686_04470 3-isopropylmalate dehydrogenase 0.55 73
Rhodopseudomonas palustris CGA009 0.46 TX73_024805 ornithine carbamoyltransferase 0.48 TX73_001175 3-isopropylmalate dehydrogenase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.46 A4249_RS11920 ornithine carbamoyltransferase 0.42 A4249_RS09995 3-isopropylmalate dehydrogenase 0.99 9
Rhodospirillum rubrum S1H 0.45 Rru_A3276 Ornithine carbamoyltransferase (NCBI) 0.51 Rru_A1191 3-isopropylmalate dehydrogenase (NCBI) 0.87 14
Desulfovibrio vulgaris Hildenborough JW710 0.44 DVU1096 argF ornithine carbamoyltransferase (TIGR) 0.54 DVU2985 leuB 3-isopropylmalate dehydrogenase (TIGR) 0.90 14
Magnetospirillum magneticum AMB-1 0.43 AMB_RS01610 ornithine carbamoyltransferase 0.52 AMB_RS20570 3-isopropylmalate dehydrogenase — —
Agrobacterium fabrum C58 0.43 Atu0429 ornithine carbamoyltransferase 0.49 Atu2791 3-isopropylmalate dehydrogenase — —
Desulfovibrio vulgaris Miyazaki F 0.43 DvMF_0046 ornithine carbamoyltransferase (RefSeq) 0.57 DvMF_1794 3-isopropylmalate dehydrogenase (RefSeq) 0.94 16
Azospirillum brasilense Sp245 0.43 AZOBR_RS19030 ornithine carbamoyltransferase 0.49 AZOBR_RS14130 3-isopropylmalate dehydrogenase — —
Dinoroseobacter shibae DFL-12 0.43 Dshi_0796 ornithine carbamoyltransferase (RefSeq) 0.52 Dshi_0081 3-isopropylmalate dehydrogenase (RefSeq) — —
Sinorhizobium meliloti 1021 0.43 SMc02137 ornithine carbamoyltransferase 0.50 SMc04405 3-isopropylmalate dehydrogenase 0.88 31
Caulobacter crescentus NA1000 0.43 CCNA_02325 ornithine carbamoyltransferase 0.48 CCNA_00193 3-isopropylmalate dehydrogenase — —
Caulobacter crescentus NA1000 Δfur 0.43 CCNA_02325 ornithine carbamoyltransferase 0.48 CCNA_00193 3-isopropylmalate dehydrogenase low > 67
Rhizobium sp. OAE497 0.42 ABIE40_RS02325 ornithine carbamoyltransferase 0.52 ABIE40_RS19050 3-isopropylmalate dehydrogenase 0.94 23
Azospirillum sp. SherDot2 0.42 MPMX19_02178 Ornithine carbamoyltransferase, anabolic 0.51 MPMX19_00607 3-isopropylmalate dehydrogenase — —
Phaeobacter inhibens DSM 17395 0.42 PGA1_c24220 ornithine carbamoyltransferase ArgF 0.54 PGA1_c29830 3-isopropylmalate dehydrogenase LeuB 0.75 13
Sphingomonas koreensis DSMZ 15582 0.39 Ga0059261_3206 ornithine carbamoyltransferase 0.60 Ga0059261_3190 3-isopropylmalate dehydrogenase 0.97 25
Synechococcus elongatus PCC 7942 0.39 Synpcc7942_2514 argF ornithine carbamoyltransferase 0.56 Synpcc7942_1505 leuB 3-isopropylmalate dehydrogenase — —
Bosea sp. OAE506 0.38 ABIE41_RS04335 ornithine carbamoyltransferase 0.51 ABIE41_RS11860 3-isopropylmalate dehydrogenase — —
Shewanella loihica PV-4 0.33 Shew_0204 ornithine carbamoyltransferase (RefSeq) 0.48 Shew_3471 3-isopropylmalate dehydrogenase (RefSeq) 0.99 1
Shewanella sp. ANA-3 0.31 Shewana3_3903 ornithine carbamoyltransferase (RefSeq) 0.48 Shewana3_3760 3-isopropylmalate dehydrogenase (RefSeq) 0.90 20
Shewanella oneidensis MR-1 0.30 SO0277 argF ornithine carbamoyltransferase (NCBI ptt file) 0.48 SO4235 leuB 3-isopropylmalate dehydrogenase (NCBI ptt file) 0.95 15
Rhodanobacter denitrificans FW104-10B01 0.22 LRK54_RS02415 N-acetylornithine carbamoyltransferase 0.41 LRK54_RS10325 3-isopropylmalate dehydrogenase 0.80 9
Rhodanobacter denitrificans MT42 0.22 LRK55_RS02170 N-acetylornithine carbamoyltransferase 0.41 LRK55_RS09965 3-isopropylmalate dehydrogenase low > 63
Dyella japonica UNC79MFTsu3.2 0.22 ABZR86_RS08730 N-acetylornithine carbamoyltransferase 0.40 ABZR86_RS15950 3-isopropylmalate dehydrogenase 0.90 55
Rhodanobacter sp. FW510-T8 0.21 OKGIIK_09480 argF N-acetylornithine carbamoyltransferase 0.42 OKGIIK_13595 leuB 3-isopropylmalate dehydrogenase low > 52
Lysobacter sp. OAE881 0.21 ABIE51_RS13410 N-acetylornithine carbamoyltransferase 0.44 ABIE51_RS17585 3-isopropylmalate dehydrogenase 0.98 15
Xanthomonas campestris pv. campestris strain 8004 0.21 Xcc-8004.2316.1 N-acetylornithine carbamoyltransferase (EC 2.1.3.9) 0.60 Xcc-8004.1053.1 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.81 27
Kangiella aquimarina DSM 16071 0.19 B158DRAFT_1975 Ornithine carbamoyltransferase 0.63 B158DRAFT_1322 3-isopropylmalate dehydrogenase (EC 1.1.1.85) low > 40
Echinicola vietnamensis KMM 6221, DSM 17526 0.16 Echvi_3849 N-succinylornithine carbamoyltransferase (EC 2.1.3.11) (from data) 0.44 Echvi_2062 3-isopropylmalate dehydrogenase — —
Pedobacter sp. GW460-11-11-14-LB5 0.15 CA265_RS18520 acetylornithine carbamoyltransferase 0.48 CA265_RS15850 3-isopropylmalate dehydrogenase 0.94 23
Bacteroides ovatus ATCC 8483 0.15 BACOVA_03533 N-acetylornithine carbamoyltransferase 0.39 BACOVA_04600 3-isopropylmalate dehydrogenase 0.95 18
Phocaeicola vulgatus CL09T03C04 0.15 HMPREF1058_RS08640 acetylornithine carbamoyltransferase 0.39 HMPREF1058_RS14565 3-isopropylmalate dehydrogenase 0.66 40
Phocaeicola dorei CL03T12C01 0.15 ABI39_RS02870 acetylornithine carbamoyltransferase 0.39 ABI39_RS10215 3-isopropylmalate dehydrogenase 0.76 29
Parabacteroides merdae CL09T00C40 0.15 HMPREF1078_RS10660 acetylornithine carbamoyltransferase 0.40 HMPREF1078_RS16640 3-isopropylmalate dehydrogenase 0.96 32
Pontibacter actiniarum KMM 6156, DSM 19842 0.15 CA264_06240 acetylornithine carbamoyltransferase 0.43 CA264_09445 3-isopropylmalate dehydrogenase low > 74
Bacteroides stercoris CC31F 0.15 HMPREF1181_RS03315 N-acetylornithine carbamoyltransferase 0.39 HMPREF1181_RS14125 3-isopropylmalate dehydrogenase 0.89 33
Mucilaginibacter yixingensis YX-36 DSM 26809 0.15 ABZR88_RS15495 acetylornithine carbamoyltransferase 0.47 ABZR88_RS11605 3-isopropylmalate dehydrogenase — —
Bacteroides thetaiotaomicron VPI-5482 0.14 BT3717 N-succinylornithine carbamoyltransferase (EC 2.1.3.11) (from data) 0.39 BT1857 3-isopropylmalate dehydrogenase (NCBI ptt file) 0.87 10

Not shown: 2 genomes with orthologs for BPHYT_RS15915 only; 29 genomes with orthologs for BPHYT_RS33900 only