| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Burkholderia phytofirmans PsJN | 1.0 | BPHYT_RS18705 | | 5,10-methylenetetrahydrofolate reductase | 1.0 | BPHYT_RS17885 | | 3-dehydroquinate synthase | 0.54 | 11 |
| Paraburkholderia graminis OAS925 | 0.97 | ABIE53_000061 | | methylenetetrahydrofolate reductase (NADPH) | 0.96 | ABIE53_003740 | | 3-dehydroquinate synthase | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.96 | H281DRAFT_05801 | | 5,10-methylenetetrahydrofolate reductase (NAD(P)) | 0.96 | H281DRAFT_05615 | | 3-dehydroquinate synthase | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.92 | QEN71_RS28715 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.89 | QEN71_RS28035 | | 3-dehydroquinate synthase | 0.84 | 43 |
| Ralstonia solanacearum GMI1000 | 0.80 | RS_RS00460 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.71 | RS_RS14880 | | 3-dehydroquinate synthase | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.80 | RR42_RS01385 | | 5,10-methylenetetrahydrofolate reductase | 0.75 | RR42_RS19005 | | 3-dehydroquinate synthase | 0.77 | 18 |
| Ralstonia solanacearum UW163 | 0.79 | UW163_RS03705 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.72 | UW163_RS06680 | | 3-dehydroquinate synthase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.79 | RALBFv3_RS09875 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.72 | RALBFv3_RS06935 | | 3-dehydroquinate synthase | — | — |
| Ralstonia solanacearum PSI07 | 0.79 | RPSI07_RS23495 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.71 | RPSI07_RS10300 | | 3-dehydroquinate synthase | — | — |
| Ralstonia sp. UNC404CL21Col | 0.79 | ABZR87_RS04865 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.71 | ABZR87_RS02590 | | 3-dehydroquinate synthase | 0.78 | 7 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.65 | GFF1692 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | 0.60 | GFF1331 | | 3-dehydroquinate synthase (EC 4.2.3.4) | — | — |
| Dechlorosoma suillum PS | 0.64 | Dsui_0640 | | 5,10-methylenetetrahydrofolate reductase | 0.57 | Dsui_1095 | | 3-dehydroquinate synthase | — | — |
| Variovorax sp. SCN45 | 0.63 | GFF2055 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | 0.61 | GFF5325 | | 3-dehydroquinate synthase (EC 4.2.3.4) | low | > 127 |
| Acidovorax sp. GW101-3H11 | 0.63 | Ac3H11_3045 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | 0.56 | Ac3H11_4705 | | 3-dehydroquinate synthase (EC 4.2.3.4) | 0.80 | 33 |
| Marinobacter adhaerens HP15 | 0.62 | HP15_2917 | | 5,10-methylenetetrahydrofolate reductase-like protein | 0.55 | HP15_480 | | 3-dehydroquinate synthase | — | — |
| Variovorax sp. OAS795 | 0.62 | ABID97_RS25015 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.63 | ABID97_RS23255 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas sp. RS175 | 0.60 | PFR28_04202 | | 5,10-methylenetetrahydrofolate reductase | 0.54 | PFR28_05013 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.60 | Pf6N2E2_4638 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | 0.56 | Pf6N2E2_3754 | | 3-dehydroquinate synthase (EC 4.2.3.4) | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.60 | AO356_13605 | | 5,10-methylenetetrahydrofolate reductase | 0.56 | AO356_09385 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas sp. S08-1 | 0.60 | OH686_10820 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.57 | OH686_10015 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas fluorescens SBW25 | 0.59 | PFLU_RS28165 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.57 | PFLU_RS02030 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.59 | PFLU_RS28165 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.57 | PFLU_RS02030 | | 3-dehydroquinate synthase | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.59 | LRK54_RS12030 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.41 | LRK54_RS04310 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.59 | AO353_08015 | | 5,10-methylenetetrahydrofolate reductase | 0.55 | AO353_12505 | | 3-dehydroquinate synthase | — | — |
| Rhodanobacter denitrificans MT42 | 0.59 | LRK55_RS11765 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.41 | LRK55_RS04085 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas simiae WCS417 | 0.59 | PS417_26510 | | 5,10-methylenetetrahydrofolate reductase | 0.57 | PS417_01985 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas putida KT2440 | 0.59 | PP_4977 | | 5,10-methylenetetrahydrofolate reductase | 0.58 | PP_5078 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.59 | Pf1N1B4_2384 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | 0.56 | Pf1N1B4_1537 | | 3-dehydroquinate synthase (EC 4.2.3.4) | — | — |
| Castellaniella sp019104865 MT123 | 0.58 | ABCV34_RS13550 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.58 | ABCV34_RS12705 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas stutzeri RCH2 | 0.58 | Psest_0313 | | 5,10-methylenetetrahydrofolate reductase, prokaryotic form | 0.54 | Psest_3713 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.58 | PfGW456L13_1050 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | 0.56 | PfGW456L13_275 | | 3-dehydroquinate synthase (EC 4.2.3.4) | 0.66 | 67 |
| Rhodanobacter sp. FW510-T8 | 0.58 | OKGIIK_11830 | metF | methylenetetrahydrofolate reductase [NAD(P)H] | 0.41 | OKGIIK_11185 | aroB | 3-dehydroquinate synthase | — | — |
| Lysobacter sp. OAE881 | 0.58 | ABIE51_RS16490 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.42 | ABIE51_RS16100 | | 3-dehydroquinate synthase | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.58 | ABZR86_RS11570 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.39 | ABZR86_RS10480 | | 3-dehydroquinate synthase | low | > 74 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.57 | Psyr_0459 | | 5,10-methylenetetrahydrofolate reductase | 0.54 | Psyr_0409 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.57 | Psyr_0459 | | 5,10-methylenetetrahydrofolate reductase | 0.54 | Psyr_0409 | | 3-dehydroquinate synthase | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.57 | Xcc-8004.4336.1 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | 0.38 | Xcc-8004.1615.1 | | 3-dehydroquinate synthase (EC 4.2.3.4) | low | > 74 |
| Acinetobacter radioresistens SK82 | 0.50 | MPMX26_01002 | | 5,10-methylenetetrahydrofolate reductase | 0.55 | MPMX26_02810 | | 3-dehydroquinate synthase | — | — |
| Serratia liquefaciens MT49 | 0.43 | IAI46_24530 | | methylenetetrahydrofolate reductase | 0.49 | IAI46_23700 | | 3-dehydroquinate synthase | 0.74 | 28 |
| Rahnella sp. WP5 | 0.43 | EX31_RS14205 | | methylenetetrahydrofolate reductase | 0.51 | EX31_RS04720 | | 3-dehydroquinate synthase | — | — |
| Enterobacter sp. TBS_079 | 0.42 | MPMX20_04529 | | 5,10-methylenetetrahydrofolate reductase | 0.49 | MPMX20_04278 | | 3-dehydroquinate synthase | 0.60 | 65 |
| Dickeya dadantii 3937 | 0.42 | DDA3937_RS00960 | | methylenetetrahydrofolate reductase | 0.49 | DDA3937_RS19545 | | 3-dehydroquinate synthase | — | — |
| Dickeya dianthicola 67-19 | 0.42 | HGI48_RS20415 | | methylenetetrahydrofolate reductase | 0.48 | HGI48_RS19675 | | 3-dehydroquinate synthase | — | — |
| Dickeya dianthicola ME23 | 0.42 | DZA65_RS21460 | | methylenetetrahydrofolate reductase | 0.48 | DZA65_RS20760 | | 3-dehydroquinate synthase | — | — |
| Pectobacterium carotovorum WPP14 | 0.42 | HER17_RS00950 | | methylenetetrahydrofolate reductase | 0.48 | HER17_RS01780 | | 3-dehydroquinate synthase | low | > 75 |
| Enterobacter asburiae PDN3 | 0.42 | EX28DRAFT_4413 | | 5,10-methylenetetrahydrofolate reductase, prokaryotic form | 0.48 | EX28DRAFT_4153 | | 3-dehydroquinate synthase (EC 4.2.3.4) | low | > 76 |
| Klebsiella michiganensis M5al | 0.42 | BWI76_RS00805 | | 5,10-methylenetetrahydrofolate reductase | 0.49 | BWI76_RS26085 | | 3-dehydroquinate synthase | 0.59 | 75 |
| Pantoea sp. MT58 | 0.42 | IAI47_00890 | | methylenetetrahydrofolate reductase | 0.50 | IAI47_01895 | | 3-dehydroquinate synthase | — | — |
| Escherichia coli BW25113 | 0.42 | b3941 | metF | 5,10-methylenetetrahydrofolate reductase (NCBI) | 0.50 | b3389 | aroB | 3-dehydroquinate synthase (NCBI) | 0.94 | 24 |
| Escherichia coli ECOR27 | 0.42 | NOLOHH_05810 | metF | methylenetetrahydrofolate reductase | 0.51 | NOLOHH_08905 | aroB | 3-dehydroquinate synthase | 0.93 | 42 |
| Escherichia coli ECOR38 | 0.42 | HEPCGN_12310 | metF | methylenetetrahydrofolate reductase | 0.50 | HEPCGN_15935 | aroB | 3-dehydroquinate synthase | 0.78 | 76 |
| Escherichia coli ECRC102 | 0.42 | NIAGMN_11420 | metF | methylenetetrahydrofolate reductase | 0.50 | NIAGMN_14885 | aroB | 3-dehydroquinate synthase | — | — |
| Escherichia coli ECRC62 | 0.42 | BNILDI_05725 | metF | methylenetetrahydrofolate reductase | 0.51 | BNILDI_02615 | aroB | 3-dehydroquinate synthase | 0.93 | 56 |
| Escherichia coli ECRC100 | 0.42 | OKFHMN_13665 | metF | methylenetetrahydrofolate reductase | 0.50 | OKFHMN_17115 | aroB | 3-dehydroquinate synthase | 0.96 | 41 |
| Escherichia coli BL21 | 0.42 | ECD_03827 | | 5,10-methylenetetrahydrofolate reductase | 0.51 | ECD_03241 | | 3-dehydroquinate synthase | low | > 61 |
| Escherichia coli ECRC98 | 0.42 | JDDGAC_17290 | metF | methylenetetrahydrofolate reductase | 0.50 | JDDGAC_20745 | aroB | 3-dehydroquinate synthase | 0.89 | 38 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.42 | OHPLBJKB_04109 | | 5,10-methylenetetrahydrofolate reductase | 0.51 | OHPLBJKB_00314 | | 3-dehydroquinate synthase | low | > 73 |
| Escherichia coli ECRC101 | 0.42 | MCAODC_04165 | metF | methylenetetrahydrofolate reductase | 0.50 | MCAODC_07645 | aroB | 3-dehydroquinate synthase | 0.86 | 50 |
| Escherichia coli ECRC99 | 0.42 | KEDOAH_14495 | metF | methylenetetrahydrofolate reductase | 0.50 | KEDOAH_11025 | aroB | 3-dehydroquinate synthase | — | — |
| Escherichia fergusonii Becca | 0.41 | EFB2_04672 | | 5,10-methylenetetrahydrofolate reductase | 0.50 | EFB2_00439 | | 3-dehydroquinate synthase | low | > 86 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.41 | GFF2329 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | 0.48 | GFF630 | | 3-dehydroquinate synthase (EC 4.2.3.4) | low | > 78 |
| Escherichia coli Nissle 1917 | 0.41 | ECOLIN_RS22760 | | methylenetetrahydrofolate reductase | 0.50 | ECOLIN_RS19360 | | 3-dehydroquinate synthase | 0.85 | 28 |
| Erwinia tracheiphila SCR3 | 0.41 | LU632_RS19630 | metF | methylenetetrahydrofolate reductase | 0.48 | LU632_RS22865 | aroB | 3-dehydroquinate synthase | low | > 74 |
| Azospirillum brasilense Sp245 | 0.40 | AZOBR_RS09540 | | 5 10-methylenetetrahydrofolate reductase | 0.38 | AZOBR_RS03220 | | 3-dehydroquinate synthase | — | — |
| Magnetospirillum magneticum AMB-1 | 0.40 | AMB_RS02230 | | methylenetetrahydrofolate reductase | 0.40 | AMB_RS19865 | | 3-dehydroquinate synthase | — | — |
| Rhodospirillum rubrum S1H | 0.39 | Rru_A1530 | | 5,10-methylenetetrahydrofolate reductase (NCBI) | 0.43 | Rru_A3741 | | 3-dehydroquinate synthase (NCBI) | — | — |
| Azospirillum sp. SherDot2 | 0.39 | MPMX19_00635 | | 5,10-methylenetetrahydrofolate reductase | 0.39 | MPMX19_02639 | | 3-dehydroquinate synthase | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.39 | Ga0059261_0992 | | 5,10-methylenetetrahydrofolate reductase, prokaryotic form | 0.35 | Ga0059261_3591 | | 3-dehydroquinate synthase (EC 4.2.3.4) | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.38 | CSW01_13560 | | methylenetetrahydrofolate reductase | 0.50 | CSW01_13300 | | 3-dehydroquinate synthase | low | > 62 |
| Shewanella amazonensis SB2B | 0.38 | Sama_3169 | metF | 5,10-methylenetetrahydrofolate reductase (RefSeq) | 0.55 | Sama_3367 | | 3-dehydroquinate synthase (RefSeq) | low | > 62 |
| Shewanella loihica PV-4 | 0.38 | Shew_0522 | metF | 5,10-methylenetetrahydrofolate reductase (RefSeq) | 0.51 | Shew_0214 | | 3-dehydroquinate synthase (RefSeq) | low | > 60 |
| Alteromonas macleodii MIT1002 | 0.37 | MIT1002_03670 | | 5,10-methylenetetrahydrofolate reductase | 0.53 | MIT1002_00447 | | 3-dehydroquinate synthase | — | — |
| Shewanella sp. ANA-3 | 0.37 | Shewana3_3612 | metF | 5,10-methylenetetrahydrofolate reductase (RefSeq) | 0.52 | Shewana3_3893 | aroB | 3-dehydroquinate synthase (RefSeq) | 0.91 | 45 |
| Shewanella oneidensis MR-1 | 0.36 | SO4054 | metF | 5,10-methylenetetrahydrofolate reductase (NCBI ptt file) | 0.53 | SO0287 | aroB | 3-dehydroquinate synthase (NCBI ptt file) | low | > 76 |
| Kangiella aquimarina DSM 16071 | 0.36 | B158DRAFT_2461 | | 5,10-methylenetetrahydrofolate reductase (NAD(P)) (EC 1.5.1.20) | 0.44 | B158DRAFT_0764 | | 3-dehydroquinate synthase (EC 4.2.3.4) | low | > 40 |
| Caulobacter crescentus NA1000 | 0.36 | CCNA_02224 | | methylenetetrahydrofolate reductase | 0.40 | CCNA_03104 | | 3-dehydroquinate synthase | 0.87 | 56 |
| Caulobacter crescentus NA1000 Δfur | 0.36 | CCNA_02224 | | methylenetetrahydrofolate reductase | 0.40 | CCNA_03104 | | 3-dehydroquinate synthase | low | > 67 |
| Rhizobium sp. OAE497 | 0.35 | ABIE40_RS11950 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.38 | ABIE40_RS17670 | | 3-dehydroquinate synthase | — | — |
| Agrobacterium fabrum C58 | 0.35 | Atu2123 | | methylenetetrahydrofolate reductase | 0.36 | Atu3625 | | 3-dehydroquinate synthase | — | — |
| Phaeobacter inhibens DSM 17395 | 0.35 | PGA1_c11700 | | 5,10-methylenetetrahydrofolate reductase MetF | 0.37 | PGA1_c14100 | | 3-dehydroquinate synthase AroB | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.35 | A4249_RS07925 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.38 | A4249_RS04175 | | 3-dehydroquinate synthase | — | — |
| Sinorhizobium meliloti 1021 | 0.34 | SMc01843 | | 5,10-methylenetetrahydrofolate reductase | 0.38 | SMc00696 | | 3-dehydroquinate synthase | — | — |
| Rhodopseudomonas palustris CGA009 | 0.34 | TX73_019175 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.37 | TX73_002610 | | 3-dehydroquinate synthase | — | — |
| Dinoroseobacter shibae DFL-12 | 0.30 | Dshi_2080 | | 5,10-methylenetetrahydrofolate reductase (RefSeq) | 0.36 | Dshi_1608 | | 3-dehydroquinate synthase (RefSeq) | — | — |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.24 | Echvi_3637 | | 5,10-methylenetetrahydrofolate reductase, prokaryotic form | 0.23 | Echvi_0121 | | 3-dehydroquinate synthase | — | — |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.21 | CA264_16780 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.24 | CA264_13105 | | 3-dehydroquinate synthase | — | — |
| Bacteroides stercoris CC31F | 0.20 | HMPREF1181_RS00120 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.24 | HMPREF1181_RS09265 | | 3-dehydroquinate synthase | low | > 56 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.20 | ABZR88_RS20935 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.27 | ABZR88_RS05215 | | 3-dehydroquinate synthase | — | — |
| Parabacteroides merdae CL09T00C40 | 0.20 | HMPREF1078_RS07860 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.22 | HMPREF1078_RS04395 | | 3-dehydroquinate synthase | — | — |
Not shown: 11 genomes with orthologs for BPHYT_RS18705 only; 2 genomes with orthologs for BPHYT_RS17885 only