Conservation of cofitness between BPHYT_RS14845 and BPHYT_RS17885 in Burkholderia phytofirmans PsJN

87 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS14845 cysteine synthase 1.0 BPHYT_RS17885 3-dehydroquinate synthase 0.77 6
Paraburkholderia bryophila 376MFSha3.1 0.99 H281DRAFT_03911 cysteine synthase 0.96 H281DRAFT_05615 3-dehydroquinate synthase — —
Paraburkholderia graminis OAS925 0.94 ABIE53_003144 cysteine synthase B 0.96 ABIE53_003740 3-dehydroquinate synthase — —
Paraburkholderia sabiae LMG 24235 0.94 QEN71_RS04135 cysteine synthase CysM 0.89 QEN71_RS28035 3-dehydroquinate synthase — —
Ralstonia solanacearum GMI1000 0.83 RS_RS04560 cysteine synthase CysM 0.71 RS_RS14880 3-dehydroquinate synthase — —
Ralstonia solanacearum UW163 0.82 UW163_RS15985 cysteine synthase CysM 0.72 UW163_RS06680 3-dehydroquinate synthase — —
Ralstonia solanacearum IBSBF1503 0.82 RALBFv3_RS13825 cysteine synthase CysM 0.72 RALBFv3_RS06935 3-dehydroquinate synthase — —
Ralstonia sp. UNC404CL21Col 0.82 ABZR87_RS09515 cysteine synthase CysM 0.71 ABZR87_RS02590 3-dehydroquinate synthase 0.65 1
Ralstonia solanacearum PSI07 0.82 RPSI07_RS19645 cysteine synthase CysM 0.71 RPSI07_RS10300 3-dehydroquinate synthase — —
Cupriavidus basilensis FW507-4G11 0.81 RR42_RS04535 cysteine synthase 0.75 RR42_RS19005 3-dehydroquinate synthase 0.77 8
Dechlorosoma suillum PS 0.79 Dsui_1954 cysteine synthase B 0.57 Dsui_1095 3-dehydroquinate synthase — —
Variovorax sp. SCN45 0.75 GFF6025 Cysteine synthase B (EC 2.5.1.47) 0.61 GFF5325 3-dehydroquinate synthase (EC 4.2.3.4) — —
Variovorax sp. OAS795 0.74 ABID97_RS07880 cysteine synthase CysM 0.63 ABID97_RS23255 3-dehydroquinate synthase — —
Acidovorax sp. GW101-3H11 0.73 Ac3H11_644 Cysteine synthase B (EC 2.5.1.47) 0.56 Ac3H11_4705 3-dehydroquinate synthase (EC 4.2.3.4) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.73 GFF709 Cysteine synthase B (EC 2.5.1.47) 0.60 GFF1331 3-dehydroquinate synthase (EC 4.2.3.4) low > 90
Marinobacter adhaerens HP15 0.69 HP15_789 cysteine synthase B 0.55 HP15_480 3-dehydroquinate synthase — —
Pseudomonas putida KT2440 0.68 PP_1654 cysteine synthase B 0.58 PP_5078 3-dehydroquinate synthase — —
Pseudomonas simiae WCS417 0.68 PS417_20160 cysteine synthase 0.57 PS417_01985 3-dehydroquinate synthase — —
Pseudomonas fluorescens FW300-N2E3 0.68 AO353_02720 cysteine synthase 0.55 AO353_12505 3-dehydroquinate synthase — —
Pseudomonas stutzeri RCH2 0.67 Psest_1638 cysteine synthase B 0.54 Psest_3713 3-dehydroquinate synthase — —
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_19050 cysteine synthase 0.56 AO356_09385 3-dehydroquinate synthase — —
Pseudomonas fluorescens FW300-N1B4 0.67 Pf1N1B4_3506 Cysteine synthase B (EC 2.5.1.47) 0.56 Pf1N1B4_1537 3-dehydroquinate synthase (EC 4.2.3.4) — —
Pseudomonas fluorescens GW456-L13 0.67 PfGW456L13_2032 Cysteine synthase B (EC 2.5.1.47) 0.56 PfGW456L13_275 3-dehydroquinate synthase (EC 4.2.3.4) 0.68 71
Pseudomonas fluorescens FW300-N2E2 0.67 Pf6N2E2_5721 Cysteine synthase B (EC 2.5.1.47) 0.56 Pf6N2E2_3754 3-dehydroquinate synthase (EC 4.2.3.4) — —
Pseudomonas sp. RS175 0.67 PFR28_03225 Cysteine synthase B 0.54 PFR28_05013 3-dehydroquinate synthase — —
Pseudomonas sp. S08-1 0.67 OH686_18950 cysteine synthase B 0.57 OH686_10015 3-dehydroquinate synthase — —
Pseudomonas fluorescens SBW25 0.67 PFLU_RS22105 cysteine synthase CysM 0.57 PFLU_RS02030 3-dehydroquinate synthase — —
Pseudomonas fluorescens SBW25-INTG 0.67 PFLU_RS22105 cysteine synthase CysM 0.57 PFLU_RS02030 3-dehydroquinate synthase — —
Pseudomonas syringae pv. syringae B728a 0.66 Psyr_3697 cysteine synthase 0.54 Psyr_0409 3-dehydroquinate synthase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.66 Psyr_3697 cysteine synthase 0.54 Psyr_0409 3-dehydroquinate synthase — —
Castellaniella sp019104865 MT123 0.66 ABCV34_RS07055 cysteine synthase CysM 0.58 ABCV34_RS12705 3-dehydroquinate synthase — —
Vibrio cholerae E7946 ATCC 55056 0.64 CSW01_02845 cysteine synthase CysM 0.50 CSW01_13300 3-dehydroquinate synthase low > 62
Acinetobacter radioresistens SK82 0.61 MPMX26_00536 Cysteine synthase B 0.55 MPMX26_02810 3-dehydroquinate synthase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.61 GFF2055 Cysteine synthase (EC 2.5.1.47) 0.48 GFF630 3-dehydroquinate synthase (EC 4.2.3.4) low > 78
Klebsiella michiganensis M5al 0.61 BWI76_RS20685 cysteine synthase B 0.49 BWI76_RS26085 3-dehydroquinate synthase — —
Rahnella sp. WP5 0.60 EX31_RS20205 cysteine synthase CysM 0.51 EX31_RS04720 3-dehydroquinate synthase — —
Escherichia fergusonii Becca 0.60 EFB2_01456 Cysteine synthase B 0.50 EFB2_00439 3-dehydroquinate synthase low > 86
Escherichia coli BW25113 0.60 b2421 cysM cysteine synthase B (O-acetylserine sulfhydrolase B) (NCBI) 0.50 b3389 aroB 3-dehydroquinate synthase (NCBI) low > 76
Escherichia coli ECOR38 0.60 HEPCGN_21345 cysM cysteine synthase B 0.50 HEPCGN_15935 aroB 3-dehydroquinate synthase low > 87
Escherichia coli Nissle 1917 0.60 ECOLIN_RS13900 cysteine synthase B 0.50 ECOLIN_RS19360 3-dehydroquinate synthase — —
Escherichia coli ECOR27 0.60 NOLOHH_13850 cysM cysteine synthase B 0.51 NOLOHH_08905 aroB 3-dehydroquinate synthase low > 75
Escherichia coli ECRC62 0.60 BNILDI_12715 cysM cysteine synthase B 0.51 BNILDI_02615 aroB 3-dehydroquinate synthase low > 75
Enterobacter asburiae PDN3 0.60 EX28DRAFT_0209 cysteine synthase B 0.48 EX28DRAFT_4153 3-dehydroquinate synthase (EC 4.2.3.4) — —
Enterobacter sp. TBS_079 0.60 MPMX20_03313 Cysteine synthase B 0.49 MPMX20_04278 3-dehydroquinate synthase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.60 OHPLBJKB_01302 Cysteine synthase B 0.51 OHPLBJKB_00314 3-dehydroquinate synthase low > 73
Escherichia coli BL21 0.60 ECD_02321 cysteine synthase B (O-acetylserine sulfhydrolase B) 0.51 ECD_03241 3-dehydroquinate synthase low > 61
Dickeya dadantii 3937 0.60 DDA3937_RS04425 cysteine synthase CysM 0.49 DDA3937_RS19545 3-dehydroquinate synthase — —
Dickeya dianthicola ME23 0.59 DZA65_RS04315 cysteine synthase CysM 0.48 DZA65_RS20760 3-dehydroquinate synthase — —
Shewanella sp. ANA-3 0.59 Shewana3_3188 cysM cysteine synthase B (RefSeq) 0.52 Shewana3_3893 aroB 3-dehydroquinate synthase (RefSeq) low > 73
Escherichia coli ECRC99 0.59 KEDOAH_06050 cysM cysteine synthase B 0.50 KEDOAH_11025 aroB 3-dehydroquinate synthase — —
Escherichia coli ECRC98 0.59 JDDGAC_26120 cysM cysteine synthase B 0.50 JDDGAC_20745 aroB 3-dehydroquinate synthase low > 86
Escherichia coli ECRC101 0.59 MCAODC_12700 cysM cysteine synthase B 0.50 MCAODC_07645 aroB 3-dehydroquinate synthase low > 87
Escherichia coli ECRC102 0.59 NIAGMN_19940 cysM cysteine synthase B 0.50 NIAGMN_14885 aroB 3-dehydroquinate synthase — —
Escherichia coli ECRC100 0.59 OKFHMN_22170 cysM cysteine synthase B 0.50 OKFHMN_17115 aroB 3-dehydroquinate synthase 0.61 31
Shewanella oneidensis MR-1 0.59 SO3598 cysM cysteine synthase B (NCBI ptt file) 0.53 SO0287 aroB 3-dehydroquinate synthase (NCBI ptt file) low > 76
Dickeya dianthicola 67-19 0.59 HGI48_RS04400 cysteine synthase CysM 0.48 HGI48_RS19675 3-dehydroquinate synthase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.57 CA264_08940 cysteine synthase B 0.24 CA264_13105 3-dehydroquinate synthase — —
Pectobacterium carotovorum WPP14 0.57 HER17_RS17210 cysteine synthase CysM 0.48 HER17_RS01780 3-dehydroquinate synthase low > 75
Echinicola vietnamensis KMM 6221, DSM 17526 0.56 Echvi_0220 cysteine synthase B 0.23 Echvi_0121 3-dehydroquinate synthase — —
Erwinia tracheiphila SCR3 0.55 LU632_RS06675 cysM cysteine synthase CysM 0.48 LU632_RS22865 aroB 3-dehydroquinate synthase low > 74
Serratia liquefaciens MT49 0.55 IAI46_18490 cysteine synthase CysM 0.49 IAI46_23700 3-dehydroquinate synthase low > 86
Pantoea sp. MT58 0.54 IAI47_05405 cysteine synthase CysM 0.50 IAI47_01895 3-dehydroquinate synthase — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.54 ABZR88_RS13695 cysteine synthase CysM 0.27 ABZR88_RS05215 3-dehydroquinate synthase — —
Parabacteroides merdae CL09T00C40 0.38 HMPREF1078_RS08075 cysteine synthase A 0.22 HMPREF1078_RS04395 3-dehydroquinate synthase — —
Bacteroides stercoris CC31F 0.36 HMPREF1181_RS14120 cysteine synthase A 0.24 HMPREF1181_RS09265 3-dehydroquinate synthase low > 56
Xanthomonas campestris pv. campestris strain 8004 0.36 Xcc-8004.1247.1 Cysteine synthase (EC 2.5.1.47) 0.38 Xcc-8004.1615.1 3-dehydroquinate synthase (EC 4.2.3.4) low > 74
Brevundimonas sp. GW460-12-10-14-LB2 0.36 A4249_RS10255 cysteine synthase A 0.38 A4249_RS04175 3-dehydroquinate synthase — —
Lysobacter sp. OAE881 0.35 ABIE51_RS16995 cysteine synthase A 0.42 ABIE51_RS16100 3-dehydroquinate synthase — —
Mycobacterium tuberculosis H37Rv 0.35 Rv2334 Cysteine synthase a CysK1 (O-acetylserine sulfhydrylase A) (O-acetylserine (thiol)-lyase A) (CSASE A) 0.30 Rv2538c 3-dehydroquinate synthase AroB — —
Synechococcus elongatus PCC 7942 0.35 Synpcc7942_B2664 srpG cysteine synthase 0.40 Synpcc7942_0525 aroB 3-dehydroquinate synthase — —
Rhodanobacter denitrificans FW104-10B01 0.35 LRK54_RS00905 cysteine synthase A 0.41 LRK54_RS04310 3-dehydroquinate synthase — —
Rhodanobacter denitrificans MT42 0.35 LRK55_RS00680 cysteine synthase A 0.41 LRK55_RS04085 3-dehydroquinate synthase — —
Rhodospirillum rubrum S1H 0.34 Rru_A3794 Cysteine synthase (NCBI) 0.43 Rru_A3741 3-dehydroquinate synthase (NCBI) — —
Sinorhizobium meliloti 1021 0.33 SMc00421 O-acetylserine sulfhydrylase A 0.38 SMc00696 3-dehydroquinate synthase — —
Rhizobium sp. OAE497 0.32 ABIE40_RS01415 cysteine synthase A 0.38 ABIE40_RS17670 3-dehydroquinate synthase — —
Magnetospirillum magneticum AMB-1 0.32 AMB_RS01005 cysteine synthase A 0.40 AMB_RS19865 3-dehydroquinate synthase — —
Kangiella aquimarina DSM 16071 0.32 B158DRAFT_1208 cystathionine beta-synthase (acetylserine-dependent) (EC 4.2.1.-) 0.44 B158DRAFT_0764 3-dehydroquinate synthase (EC 4.2.3.4) 0.65 6
Alteromonas macleodii MIT1002 0.31 MIT1002_02237 Cysteine synthase A 0.53 MIT1002_00447 3-dehydroquinate synthase — —
Azospirillum brasilense Sp245 0.31 AZOBR_RS01080 cysteine synthase 0.38 AZOBR_RS03220 3-dehydroquinate synthase — —
Agrobacterium fabrum C58 0.31 Atu0312 cysteine synthase 0.36 Atu3625 3-dehydroquinate synthase — —
Shewanella loihica PV-4 0.31 Shew_2382 cysteine synthase A (RefSeq) 0.51 Shew_0214 3-dehydroquinate synthase (RefSeq) 0.72 35
Shewanella amazonensis SB2B 0.30 Sama_1508 cysteine synthase A (RefSeq) 0.55 Sama_3367 3-dehydroquinate synthase (RefSeq) low > 62
Caulobacter crescentus NA1000 0.30 CCNA_03740 cysteine synthase 0.40 CCNA_03104 3-dehydroquinate synthase low > 66
Caulobacter crescentus NA1000 Δfur 0.30 CCNA_03740 cysteine synthase 0.40 CCNA_03104 3-dehydroquinate synthase low > 67
Azospirillum sp. SherDot2 0.30 MPMX19_00237 Cysteine synthase 0.39 MPMX19_02639 3-dehydroquinate synthase — —
Sphingomonas koreensis DSMZ 15582 0.30 Ga0059261_3644 cysteine synthase A 0.35 Ga0059261_3591 3-dehydroquinate synthase (EC 4.2.3.4) — —
Dinoroseobacter shibae DFL-12 0.25 Dshi_0891 cysteine synthase A (RefSeq) 0.36 Dshi_1608 3-dehydroquinate synthase (RefSeq) — —
Phaeobacter inhibens DSM 17395 0.25 PGA1_c13950 cysteine synthase CysK 0.37 PGA1_c14100 3-dehydroquinate synthase AroB — —

Not shown: 11 genomes with orthologs for BPHYT_RS14845 only; 3 genomes with orthologs for BPHYT_RS17885 only