Conservation of cofitness between BPHYT_RS16975 and BPHYT_RS17400 in Burkholderia phytofirmans PsJN

71 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS16975 shikimate 5-dehydrogenase 1.0 BPHYT_RS17400 anthranilate phosphoribosyltransferase 0.74 7
Paraburkholderia graminis OAS925 0.93 ABIE53_003560 shikimate dehydrogenase 0.98 ABIE53_003642 anthranilate phosphoribosyltransferase — —
Paraburkholderia bryophila 376MFSha3.1 0.90 H281DRAFT_06291 shikimate dehydrogenase (EC 1.1.1.25) 0.98 H281DRAFT_05713 anthranilate phosphoribosyltransferase — —
Paraburkholderia sabiae LMG 24235 0.81 QEN71_RS27130 shikimate dehydrogenase 0.95 QEN71_RS27560 anthranilate phosphoribosyltransferase 0.83 4
Ralstonia solanacearum PSI07 0.55 RPSI07_RS11300 shikimate dehydrogenase 0.79 RPSI07_RS10740 anthranilate phosphoribosyltransferase — —
Ralstonia solanacearum IBSBF1503 0.54 RALBFv3_RS05945 shikimate dehydrogenase 0.78 RALBFv3_RS06500 anthranilate phosphoribosyltransferase — —
Ralstonia solanacearum UW163 0.54 UW163_RS07680 shikimate dehydrogenase 0.78 UW163_RS07125 anthranilate phosphoribosyltransferase — —
Ralstonia solanacearum GMI1000 0.54 RS_RS13890 shikimate dehydrogenase 0.79 RS_RS14445 Anthranilate phosphoribosyltransferase 1 low > 80
Ralstonia sp. UNC404CL21Col 0.54 ABZR87_RS01605 shikimate dehydrogenase 0.80 ABZR87_RS02155 anthranilate phosphoribosyltransferase 0.63 17
Herbaspirillum seropedicae SmR1 0.51 HSERO_RS01990 shikimate 5-dehydrogenase 0.66 HSERO_RS19445 anthranilate phosphoribosyltransferase 0.79 5
Cupriavidus basilensis FW507-4G11 0.51 RR42_RS17645 shikimate dehydrogenase 0.82 RR42_RS18305 anthranilate phosphoribosyltransferase 0.72 29
Pseudomonas sp. S08-1 0.47 OH686_12485 Shikimate 5-dehydrogenase I alpha 0.46 OH686_15135 Anthranilate phosphoribosyltransferase low > 80
Pseudomonas putida KT2440 0.47 PP_0074 shikimate 5-dehydrogenase 0.45 PP_0421 Anthranilate phosphoribosyltransferase — —
Shewanella sp. ANA-3 0.47 Shewana3_0043 aroE shikimate 5-dehydrogenase (RefSeq) 0.27 Shewana3_1518 trpD anthranilate phosphoribosyltransferase (RefSeq) 0.93 17
Pseudomonas syringae pv. syringae B728a 0.46 Psyr_0025 shikimate dehydrogenase 0.45 Psyr_4580 anthranilate phosphoribosyltransferase 0.61 26
Pseudomonas syringae pv. syringae B728a ΔmexB 0.46 Psyr_0025 shikimate dehydrogenase 0.45 Psyr_4580 anthranilate phosphoribosyltransferase 0.53 81
Pseudomonas sp. RS175 0.46 PFR28_04655 Shikimate dehydrogenase (NADP(+)) 0.42 PFR28_04044 Anthranilate phosphoribosyltransferase — —
Pseudomonas fluorescens FW300-N2C3 0.45 AO356_11315 shikimate dehydrogenase 0.42 AO356_14435 anthranilate phosphoribosyltransferase 0.52 25
Pseudomonas simiae WCS417 0.45 PS417_00125 shikimate dehydrogenase 0.41 PS417_25715 anthranilate phosphoribosyltransferase — —
Pseudomonas fluorescens FW300-N2E2 0.45 Pf6N2E2_4130 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.42 Pf6N2E2_4825 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) — —
Pseudomonas fluorescens SBW25-INTG 0.45 PFLU_RS00120 shikimate dehydrogenase 0.41 PFLU_RS27370 anthranilate phosphoribosyltransferase — —
Pseudomonas fluorescens SBW25 0.45 PFLU_RS00120 shikimate dehydrogenase 0.41 PFLU_RS27370 anthranilate phosphoribosyltransferase — —
Pseudomonas fluorescens FW300-N1B4 0.45 Pf1N1B4_1906 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.42 Pf1N1B4_2548 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) 0.57 15
Marinobacter adhaerens HP15 0.45 HP15_3750 shikimate dehydrogenase 0.44 HP15_3290 anthranilate phosphoribosyltransferase — —
Vibrio cholerae E7946 ATCC 55056 0.45 CSW01_00280 shikimate dehydrogenase 0.31 CSW01_05940 anthranilate phosphoribosyltransferase low > 62
Pseudomonas fluorescens GW456-L13 0.45 PfGW456L13_644 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.43 PfGW456L13_1221 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) 0.72 51
Castellaniella sp019104865 MT123 0.44 ABCV34_RS11630 shikimate dehydrogenase 0.62 ABCV34_RS10305 anthranilate phosphoribosyltransferase low > 48
Pseudomonas stutzeri RCH2 0.44 Psest_0029 shikimate 5-dehydrogenase 0.48 Psest_3648 anthranilate phosphoribosyltransferase — —
Shewanella oneidensis MR-1 0.44 SO0040 aroE shikimate 5-dehydrogenase (NCBI ptt file) 0.27 SO3021 trpD anthranilate phosphoribosyltransferase (NCBI ptt file) 0.90 12
Pseudomonas fluorescens FW300-N2E3 0.44 AO353_10670 shikimate dehydrogenase 0.41 AO353_07215 anthranilate phosphoribosyltransferase 0.73 25
Shewanella amazonensis SB2B 0.41 Sama_0052 shikimate dehydrogenase (RefSeq) 0.30 Sama_2131 trpD anthranilate phosphoribosyltransferase (RefSeq) 0.76 4
Pantoea sp. MT58 0.40 IAI47_02315 shikimate dehydrogenase 0.27 IAI47_09180 anthranilate phosphoribosyltransferase — —
Shewanella loihica PV-4 0.40 Shew_3727 shikimate 5-dehydrogenase (RefSeq) 0.26 Shew_2253 anthranilate phosphoribosyltransferase (RefSeq) 0.84 11
Acidovorax sp. GW101-3H11 0.38 Ac3H11_4044 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.72 Ac3H11_771 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) 0.96 8
Serratia liquefaciens MT49 0.37 IAI46_23240 shikimate dehydrogenase 0.27 IAI46_14030 anthranilate phosphoribosyltransferase low > 86
Variovorax sp. SCN45 0.35 GFF4456 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.73 GFF5891 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) — —
Acinetobacter radioresistens SK82 0.35 MPMX26_02748 Shikimate dehydrogenase (NADP(+)) 0.44 MPMX26_00984 Anthranilate phosphoribosyltransferase low > 36
Alteromonas macleodii MIT1002 0.35 MIT1002_00029 Shikimate dehydrogenase 0.30 MIT1002_01428 Anthranilate synthase component II — —
Dickeya dadantii 3937 0.35 DDA3937_RS19100 shikimate dehydrogenase 0.28 DDA3937_RS10475 anthranilate phosphoribosyltransferase — —
Dickeya dianthicola ME23 0.35 DZA65_RS20315 shikimate dehydrogenase 0.27 DZA65_RS10955 anthranilate phosphoribosyltransferase — —
Dickeya dianthicola 67-19 0.35 HGI48_RS19190 shikimate dehydrogenase 0.28 HGI48_RS10475 anthranilate phosphoribosyltransferase — —
Variovorax sp. OAS795 0.34 ABID97_RS06300 shikimate dehydrogenase 0.76 ABID97_RS05275 anthranilate phosphoribosyltransferase — —
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.5020.1 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.72 Xcc-8004.621.1 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) 0.92 2
Lysobacter sp. OAE881 0.29 ABIE51_RS01815 shikimate dehydrogenase 0.67 ABIE51_RS04180 anthranilate phosphoribosyltransferase 0.77 4
Kangiella aquimarina DSM 16071 0.28 B158DRAFT_0259 shikimate 5-dehydrogenase 0.30 B158DRAFT_2427 anthranilate phosphoribosyltransferase low > 40
Methanococcus maripaludis JJ 0.21 MMJJ_RS00280 shikimate dehydrogenase 0.32 MMJJ_RS09170 anthranilate phosphoribosyltransferase — —
Methanococcus maripaludis S2 0.21 MMP_RS04855 shikimate dehydrogenase 0.32 MMP_RS05210 anthranilate phosphoribosyltransferase — —
Rhodopseudomonas palustris CGA009 0.21 TX73_022410 shikimate dehydrogenase 0.41 TX73_014980 anthranilate phosphoribosyltransferase — —
Sinorhizobium meliloti 1021 0.20 SMc02791 shikimate 5-dehydrogenase 0.37 SMc00235 anthranilate phosphoribosyltransferase — —
Desulfovibrio vulgaris Hildenborough JW710 0.20 DVU0115 aroE shikimate 5-dehydrogenase (TIGR) 0.30 DVU0467 trpD anthranilate phosphoribosyltransferase (TIGR) — —
Desulfovibrio vulgaris Miyazaki F 0.20 DvMF_1962 shikimate 5-dehydrogenase (RefSeq) 0.27 DvMF_1744 anthranilate phosphoribosyltransferase (RefSeq) — —
Synechococcus elongatus PCC 7942 0.20 Synpcc7942_2467 aroE shikimate 5-dehydrogenase 0.28 Synpcc7942_2123 trpD anthranilate phosphoribosyltransferase — —
Phaeobacter inhibens DSM 17395 0.19 PGA1_c35150 shikimate dehydrogenase AroE 0.31 PGA1_c16890 anthranilate phosphoribosyltransferase TrpD — —
Rhodospirillum rubrum S1H 0.19 Rru_A3613 Quinate/Shikimate 5-dehydrogenase (NCBI) 0.34 Rru_A1896 Anthranilate phosphoribosyl transferase (NCBI) — —
Azospirillum sp. SherDot2 0.19 MPMX19_02560 Shikimate dehydrogenase (NADP(+)) 0.34 MPMX19_01015 Anthranilate phosphoribosyltransferase — —
Rhizobium sp. OAE497 0.19 ABIE40_RS19250 shikimate dehydrogenase 0.37 ABIE40_RS09545 anthranilate phosphoribosyltransferase — —
Bosea sp. OAE506 0.18 ABIE41_RS04650 shikimate dehydrogenase 0.34 ABIE41_RS17420 anthranilate phosphoribosyltransferase — —
Azospirillum brasilense Sp245 0.18 AZOBR_RS01765 shikimate 5-dehydrogenase 0.37 AZOBR_RS07455 anthranilate phosphoribosyltransferase — —
Caulobacter crescentus NA1000 0.17 CCNA_00003 shikimate dehydrogenase (EC 1.1.1.25) (from data) 0.35 CCNA_01975 anthranilate phosphoribosyltransferase 0.94 4
Caulobacter crescentus NA1000 Δfur 0.17 CCNA_00003 shikimate 5-dehydrogenase 0.35 CCNA_01975 anthranilate phosphoribosyltransferase low > 67
Parabacteroides merdae CL09T00C40 0.15 HMPREF1078_RS14200 shikimate dehydrogenase 0.24 HMPREF1078_RS00135 anthranilate phosphoribosyltransferase 0.92 26
Bacteroides stercoris CC31F 0.15 HMPREF1181_RS06320 shikimate dehydrogenase 0.24 HMPREF1181_RS15335 anthranilate phosphoribosyltransferase 0.82 21
Mucilaginibacter yixingensis YX-36 DSM 26809 0.15 ABZR88_RS20055 shikimate dehydrogenase 0.25 ABZR88_RS10675 anthranilate phosphoribosyltransferase — —
Phocaeicola vulgatus CL09T03C04 0.14 HMPREF1058_RS16750 shikimate dehydrogenase 0.25 HMPREF1058_RS07185 anthranilate phosphoribosyltransferase low > 67
Phocaeicola dorei CL03T12C01 0.14 ABI39_RS12665 shikimate dehydrogenase 0.25 ABI39_RS21060 anthranilate phosphoribosyltransferase 0.80 26
Echinicola vietnamensis KMM 6221, DSM 17526 0.14 Echvi_1145 Shikimate 5-dehydrogenase 0.26 Echvi_2507 anthranilate phosphoribosyltransferase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.14 CA264_19075 shikimate dehydrogenase 0.24 CA264_05065 anthranilate phosphoribosyltransferase — —
Magnetospirillum magneticum AMB-1 0.14 AMB_RS23010 shikimate dehydrogenase 0.35 AMB_RS14410 anthranilate phosphoribosyltransferase — —
Pedobacter sp. GW460-11-11-14-LB5 0.13 CA265_RS19745 shikimate dehydrogenase (EC 1.1.1.25) (from data) 0.25 CA265_RS05010 anthranilate phosphoribosyltransferase (EC 2.4.2.18) (from data) — —
Bacteroides ovatus ATCC 8483 0.13 BACOVA_05065 putative shikimate dehydrogenase 0.26 BACOVA_03782 anthranilate phosphoribosyltransferase — —
Bacteroides thetaiotaomicron VPI-5482 0.13 BT4215 shikimate dehydrogenase (EC 1.1.1.25) (from data) 0.26 BT0530 anthranilate phosphoribosyltransferase (EC 2.4.2.18) (from data) — —
Mycobacterium tuberculosis H37Rv 0.11 Rv2552c Probable shikimate 5-dehydrogenase AroE (5-dehydroshikimate reductase) 0.26 Rv2192c Probable anthranilate phosphoribosyltransferase TrpD — —

Not shown: 19 genomes with orthologs for BPHYT_RS16975 only; 11 genomes with orthologs for BPHYT_RS17400 only